Rh2CG213600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000319
Physical Location & Seq
Forward (+)
20999846 .. 21003378
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG213600.1

Sequence Viewer

Length: 1302 bp
ATGGGGTTTAATTCCATGGATCCTCCGGTTTATAAGGCGGCAGCATCAGGTGATCTTCGTTTTCTCAAAGAAGTTAGAGATGGAGACAGATCAGTTGATATTCTCTTTCAGAAGACCCCTAAAAACAACAACGTTCTTCACATAGCTGCTCAGTTCAAGCAAATACAGTTCTTCGAGGAATTCCCAAATCAGATCCAATCTCCGTTGTTTTGGGCCACCAACACCAAGGGTGACACTCCCATGCACATTGCTGCTAGGGTTGGTTGTGTTAAACTAATTGAGTTCCTCATCGATCACGCGAGAAAGTCACAAACTAATGCAGCAGATGTGGAGACCGGACCAGCCGATGCTGAAGCTCATAACGAGTTACTTCGAATGGCTAATTCGGAAAGAGATACAGCTTTGCATGTTGCTGTTAGATGCGGGCACCATGATGTTGTGATTCTGTTAATGGATGCTGATCCTGAATTGTGCTGTTATACCAATAACGCCAACGAATCTCCTTTGTTCTTAGCTGTCTGCAAGGGGTTTCCAAAAATTGGTTCTTGTATCTTGGACAAGTCTCCAGCATCTCTTTCTTTCGAGGGGGTTAAAGGTGTCACAGCTTTGCATGCAGCAGTAACCCGCAATTCAACCTGCAAAGACATCGTGAAGATGATGGTGACCAAAAATCCTGAAATAATCAAAGAAGTTGATGAACTTGGTTGGACTCCCTTACACTATGCAGCATTCAGAGGGAATGTATCAGCAATTAGATCGCTGATAAAACGTGACAGTTCTGTAGCTTACATATTAGACAATTGTGGAATGTCTGCTCTTCATGTTGCTGCGTACGGAGGCCGCATAGAAGTAATGAAAGAGTTGATTCAATTGCGGCCTGATACTTGTGATCTGCTCAACCACAAAGGCCAAACGGCTGTACATGCTGCAGTTTTGGGTGAGATGCCGGCGGTTATTAAGTACATTTTGAAGACGCCTGAGCTAGCAGGACTTGTAAACGAAGCAGACAATGAGGGAAATACTCCTTTGCATCTGGCTGCCTCTAAATCGAATTCTATCCTTATGAAAGCCTTGGCAAGTGACCCCAAACTTGACAAGACTGCAACCAATGACCTCGTCTCCCTTCCACAGTCACACGACCGCATAGCCAGAGAGGAGGCTGGGGACGGCGCCATTCGATCCATCCACAACCCACCATTGCACGTCACATCGAATCAGCCTTCGCGAAGATCTCAACCCAGTCGACCCCATCAAACCGCCACTGCAACCCCAACTCCGCCAACTTCCTTGCCATCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

433

Amino Acids

47.11

Weight (kDa)

6.63

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 13 - 102 1.4e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 74 - 154 4.4e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 128 - 185 1.8e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 203 - 254 1.7e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 215 - 291 6.3e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 246 - 286 8.8e-06 Ankyrin repeats (many copies)
Ank_4 PF13637 273 - 321 6.6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 297 - 367 1.7e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 644
AccB1I GGYRCC 2 cut(s) 426, 1169
AccB7I CCANNNNNTGG 1 cut(s) 539
AccI GTMKAC 1 cut(s) 1243
AccII CGCG 2 cut(s) 299, 1225
AciI CCGC 9 cut(s) 38, 423, 625, 841, 874, 950, 1141, 1257, 1277
AclI AACGTT 1 cut(s) 132
AclWI GGATC 5 cut(s) 14, 27, 187, 455, 1173
AcsI RAATTY 2 cut(s) 179, 1051
AcuI CTGAAG 1 cut(s) 372
AcyI GRCGYC 2 cut(s) 974, 1170
AfaI GTAC 3 cut(s) 833, 921, 962
AfiI CCNNNNNNNGG 1 cut(s) 539
AgsI TTSAA 4 cut(s) 157, 633, 869, 970
AjiI CACGTC 1 cut(s) 1204
AjuI GAANNNNNNNTTGG 2 cut(s) 526, 558
AluBI AGCT 7 cut(s) 146, 356, 401, 515, 605, 785, 982
AluI AGCT 7 cut(s) 146, 356, 401, 515, 605, 785, 982
Alw26I GTCTC 4 cut(s) 78, 326, 567, 1123
AlwI GGATC 5 cut(s) 14, 27, 187, 455, 1173
AoxI GGCC 4 cut(s) 213, 838, 875, 907
ApeKI GCWGC 9 cut(s) 41, 146, 251, 320, 614, 725, 827, 926, 1037
ApoI RAATTY 2 cut(s) 179, 1051
AspLEI GCGC 1 cut(s) 1172
AspS9I GGNCC 2 cut(s) 213, 338
AsuHPI GGTGA 4 cut(s) 62, 242, 673, 950
AsuII TTCGAA 1 cut(s) 373
AsuNHI GCTAGC 1 cut(s) 982
AvaII GGWCC 1 cut(s) 338
BaeGI GKGCMC 1 cut(s) 429
BamHI GGATCC 1 cut(s) 19
BanI GGYRCC 2 cut(s) 426, 1169
BbsI GAAGAC 2 cut(s) 119, 977
BbvI GCAGC 9 cut(s) 53, 133, 238, 332, 626, 737, 814, 913, 1024
BccI CCATC 5 cut(s) 74, 652, 1190, 1257, 1300
BceAI ACGGC 2 cut(s) 930, 1183
BcgI CGANNNNNNTGC 4 cut(s) 628, 662, 738, 772
BcoDI GTCTC 4 cut(s) 78, 326, 567, 1123
BfaI CTAG 2 cut(s) 255, 983
BfmI CTRYAG 2 cut(s) 780, 927
BfoI RGCGCY 1 cut(s) 1173
BfuAI ACCTGC 1 cut(s) 644
BglII AGATCT 1 cut(s) 1229
Bme18I GGWCC 1 cut(s) 338
BmgBI CACGTC 1 cut(s) 1204
BmgT120I GGNCC 2 cut(s) 213, 338
BmiI GGNNCC 3 cut(s) 21, 428, 1171
BmrI ACTGGG 1 cut(s) 1233
BmsI GCATC 7 cut(s) 53, 337, 410, 445, 578, 933, 1039
BmtI GCTAGC 1 cut(s) 986
BmuI ACTGGG 1 cut(s) 1233
BpiI GAAGAC 2 cut(s) 119, 977
BpmI CTGGAG 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 978
Bpu14I TTCGAA 1 cut(s) 373
Bsa29I ATCGAT 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 459
BsaHI GRCGYC 2 cut(s) 974, 1170
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 3 cut(s) 15, 225, 1071
BsaWI WCCGGW 2 cut(s) 25, 335
BsaXI ACNNNNNCTCC 4 cut(s) 1103, 1133, 1258, 1288
Bsc4I CCNNNNNNNGG 1 cut(s) 539
Bse118I RCCGGY 1 cut(s) 946
Bse1I ACTGG 1 cut(s) 1239
Bse3DI GCAATG 2 cut(s) 246, 1196
Bse8I GATNNNNATC 1 cut(s) 459
BseCI ATCGAT 1 cut(s) 291
BseDI CCNNGG 3 cut(s) 15, 225, 1071
BseGI GGATG 2 cut(s) 460, 1182
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 1 cut(s) 539
BseMI GCAATG 2 cut(s) 246, 1196
BseMII CTCAG 2 cut(s) 164, 969
BseNI ACTGG 1 cut(s) 1239
BseRI GAGGAG 1 cut(s) 1169
BseSI GKGCMC 1 cut(s) 429
BseXI GCAGC 9 cut(s) 53, 133, 238, 332, 626, 737, 814, 913, 1024
BseYI CCCAGC 1 cut(s) 1160
Bsh1236I CGCG 2 cut(s) 299, 1225
Bsh1285I CGRYCG 1 cut(s) 1141
BshFI GGCC 4 cut(s) 215, 840, 877, 909
BshNI GGYRCC 2 cut(s) 426, 1169
BshVI ATCGAT 1 cut(s) 291
BsiEI CGRYCG 1 cut(s) 1141
BsiSI CCGG 3 cut(s) 26, 336, 947
BsiWI CGTACG 1 cut(s) 831
BslFI GGGAC 1 cut(s) 1178
BslI CCNNNNNNNGG 1 cut(s) 539
BsmAI GTCTC 4 cut(s) 78, 326, 567, 1123
BsmBI CGTCTC 1 cut(s) 1123
BsmFI GGGAC 1 cut(s) 1178
BsmI GAATGC 1 cut(s) 728
BsnI GGCC 4 cut(s) 215, 840, 877, 909
Bso31I GGTCTC 1 cut(s) 326
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 1 cut(s) 429
Bsp1407I TGTACA 1 cut(s) 919
Bsp19I CCATGG 1 cut(s) 15
Bsp68I TCGCGA 1 cut(s) 1225
BspACI CCGC 9 cut(s) 38, 423, 625, 841, 874, 950, 1141, 1257, 1277
BspANI GGCC 4 cut(s) 215, 840, 877, 909
BspCNI CTCAG 2 cut(s) 163, 970
BspDI ATCGAT 1 cut(s) 291
BspFNI CGCG 2 cut(s) 299, 1225
BspLI GGNNCC 3 cut(s) 21, 428, 1171
BspMAI CTGCAG 1 cut(s) 931
BspMI ACCTGC 1 cut(s) 644
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 5 cut(s) 14, 27, 187, 455, 1173
BspQI GCTCTTC 1 cut(s) 822
BspT104I TTCGAA 1 cut(s) 373
BspT107I GGYRCC 2 cut(s) 426, 1169
BspTNI GGTCTC 1 cut(s) 326
BsrDI GCAATG 2 cut(s) 246, 1196
BsrFI RCCGGY 1 cut(s) 946
BsrGI TGTACA 1 cut(s) 919
BsrI ACTGG 1 cut(s) 1239
BssAI RCCGGY 1 cut(s) 946
BssECI CCNNGG 3 cut(s) 15, 225, 1071
BssNI GRCGYC 2 cut(s) 974, 1170
BssT1I CCWWGG 3 cut(s) 15, 225, 1071
Bst4CI ACNGT 3 cut(s) 168, 776, 1131
Bst6I CTCTTC 1 cut(s) 822
BstACI GRCGYC 2 cut(s) 974, 1170
BstAUI TGTACA 1 cut(s) 919
BstBI TTCGAA 1 cut(s) 373
BstC8I GCNNGC 4 cut(s) 425, 612, 948, 984
BstDEI CTNAG 3 cut(s) 150, 511, 978
BstDSI CCRYGG 1 cut(s) 15
BstEII GGTNACC 1 cut(s) 661
BstF5I GGATG 2 cut(s) 460, 1182
BstFNI CGCG 2 cut(s) 299, 1225
BstH2I RGCGCY 1 cut(s) 1173
BstHHI GCGC 1 cut(s) 1172
BstMAI GTCTC 4 cut(s) 78, 326, 567, 1123
BstMCI CGRYCG 1 cut(s) 1141
BstMWI GCNNNNNNNGC 2 cut(s) 611, 923
BstNSI RCATGY 3 cut(s) 410, 614, 926
BstPI GGTNACC 1 cut(s) 661
BstSFI CTRYAG 2 cut(s) 780, 927
BstSLI GKGCMC 1 cut(s) 429
BstUI CGCG 2 cut(s) 299, 1225
BstV1I GCAGC 9 cut(s) 53, 133, 238, 332, 626, 737, 814, 913, 1024
BstV2I GAAGAC 2 cut(s) 119, 977
BstX2I RGATCY 3 cut(s) 19, 192, 1229
BstYI RGATCY 3 cut(s) 19, 192, 1229
Bsu15I ATCGAT 1 cut(s) 291
BsuRI GGCC 4 cut(s) 215, 840, 877, 909
BsuTUI ATCGAT 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 15
BtrI CACGTC 1 cut(s) 1204
BtsCI GGATG 2 cut(s) 460, 1182
BtsI GCAGTG 1 cut(s) 1260
BtsIMutI CAGTG 1 cut(s) 1260
BtuMI TCGCGA 1 cut(s) 1225
BveI ACCTGC 1 cut(s) 644
Cac8I GCNNGC 4 cut(s) 425, 612, 948, 984
CfoI GCGC 1 cut(s) 1172
Cfr10I RCCGGY 1 cut(s) 946
Cfr13I GGNCC 2 cut(s) 213, 338
ClaI ATCGAT 1 cut(s) 291
CseI GACGC 1 cut(s) 982
Csp6I GTAC 3 cut(s) 832, 920, 961
CviAII CATG 7 cut(s) 16, 241, 407, 431, 611, 821, 923
CviQI GTAC 3 cut(s) 832, 920, 961
DdeI CTNAG 3 cut(s) 150, 511, 978
DinI GGCGCC 1 cut(s) 1171
Eam1104I CTCTTC 1 cut(s) 822
EarI CTCTTC 1 cut(s) 822
EciI GGCGGA 1 cut(s) 1266
Eco130I CCWWGG 3 cut(s) 15, 225, 1071
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 1 cut(s) 338
Eco57I CTGAAG 1 cut(s) 372
Eco91I GGTNACC 1 cut(s) 661
EcoO65I GGTNACC 1 cut(s) 661
EcoRI GAATTC 2 cut(s) 179, 1051
EcoT14I CCWWGG 3 cut(s) 15, 225, 1071
EgeI GGCGCC 1 cut(s) 1171
EheI GGCGCC 1 cut(s) 1171
ErhI CCWWGG 3 cut(s) 15, 225, 1071
Esp3I CGTCTC 1 cut(s) 1123
FaeI CATG 7 cut(s) 19, 244, 410, 434, 614, 824, 926
FaqI GGGAC 1 cut(s) 1178
FatI CATG 7 cut(s) 15, 240, 406, 430, 610, 820, 922
FauI CCCGC 2 cut(s) 416, 632
FblI GTMKAC 1 cut(s) 1243
FokI GGATG 2 cut(s) 467, 1169
FspBI CTAG 2 cut(s) 255, 983
GlaI GCGC 1 cut(s) 1171
GsaI CCCAGC 1 cut(s) 1164
GsuI CTGGAG 1 cut(s) 549
HaeII RGCGCY 1 cut(s) 1173
HaeIII GGCC 4 cut(s) 215, 840, 877, 909
HapII CCGG 3 cut(s) 26, 336, 947
HgaI GACGC 1 cut(s) 982
HhaI GCGC 1 cut(s) 1172
Hin1I GRCGYC 2 cut(s) 974, 1170
Hin1II CATG 7 cut(s) 19, 244, 410, 434, 614, 824, 926
Hin6I GCGC 1 cut(s) 1170
HinP1I GCGC 1 cut(s) 1170
HincII GTYRAC 1 cut(s) 1244
HindII GTYRAC 1 cut(s) 1244
HinfI GANTC 5 cut(s) 442, 497, 709, 865, 1213
HpaII CCGG 3 cut(s) 26, 336, 947
HphI GGTGA 4 cut(s) 62, 242, 673, 950
Hpy166II GTNNAC 2 cut(s) 997, 1244
Hpy188I TCNGA 4 cut(s) 111, 192, 388, 734
Hpy188III TCNNGA 5 cut(s) 464, 649, 674, 1224, 1299
Hpy8I GTNNAC 2 cut(s) 997, 1244
HpyAV CCTTC 2 cut(s) 1133, 1230
HpyCH4III ACNGT 3 cut(s) 168, 776, 1131
HpyCH4IV ACGT 3 cut(s) 132, 769, 1203
HpyF10VI GCNNNNNNNGC 2 cut(s) 611, 923
HpyF3I CTNAG 3 cut(s) 150, 511, 978
HpySE526I ACGT 3 cut(s) 132, 769, 1203
Hsp92I GRCGYC 2 cut(s) 974, 1170
Hsp92II CATG 7 cut(s) 19, 244, 410, 434, 614, 824, 926
HspAI GCGC 1 cut(s) 1170
KasI GGCGCC 1 cut(s) 1169
KroI GCCGGC 1 cut(s) 946
KroNI GCCGGC 1 cut(s) 948
LguI GCTCTTC 1 cut(s) 822
Lsp1109I GCAGC 9 cut(s) 53, 133, 238, 332, 626, 737, 814, 913, 1024
LweI GCATC 7 cut(s) 53, 337, 410, 445, 578, 933, 1039
MaeI CTAG 2 cut(s) 255, 983
MaeII ACGT 3 cut(s) 132, 769, 1203
MboII GAAGA 8 cut(s) 47, 124, 128, 163, 664, 809, 982, 1239
MfeI CAATTG 2 cut(s) 799, 869
MflI RGATCY 3 cut(s) 19, 192, 1229
MhlI GDGCHC 1 cut(s) 429
Mly113I GGCGCC 1 cut(s) 1170
MlyI GAGTC 1 cut(s) 703
MmeI TCCRAC 1 cut(s) 686
MroNI GCCGGC 1 cut(s) 946
MseI TTAA 5 cut(s) 9, 270, 449, 591, 957
MslI CAYNNNNRTG 2 cut(s) 239, 432
MspI CCGG 3 cut(s) 26, 336, 947
MunI CAATTG 2 cut(s) 799, 869
Mva1269I GAATGC 1 cut(s) 728
MvnI CGCG 2 cut(s) 299, 1225
MwoI GCNNNNNNNGC 2 cut(s) 611, 923
NaeI GCCGGC 1 cut(s) 948
NarI GGCGCC 1 cut(s) 1170
NcoI CCATGG 1 cut(s) 15
NgoMIV GCCGGC 1 cut(s) 946
NheI GCTAGC 1 cut(s) 982
NlaIII CATG 7 cut(s) 19, 244, 410, 434, 614, 824, 926
NlaIV GGNNCC 3 cut(s) 21, 428, 1171
NmuCI GTSAC 8 cut(s) 230, 306, 598, 661, 770, 1079, 1131, 1204
NruI TCGCGA 1 cut(s) 1225
NspI RCATGY 3 cut(s) 410, 614, 926
NspV TTCGAA 1 cut(s) 373
PaeI GCATGC 1 cut(s) 614
PciSI GCTCTTC 1 cut(s) 822
PctI GAATGC 1 cut(s) 728
PdiI GCCGGC 1 cut(s) 948
PfeI GAWTC 4 cut(s) 442, 497, 865, 1213
Pfl23II CGTACG 1 cut(s) 831
PflFI GACNNNGTC 1 cut(s) 1115
PflMI CCANNNNNTGG 1 cut(s) 539
PleI GAGTC 1 cut(s) 703
PluTI GGCGCC 1 cut(s) 1173
PpsI GAGTC 1 cut(s) 703
PsiI TTATAA 1 cut(s) 33
Psp1406I AACGTT 1 cut(s) 132
PspEI GGTNACC 1 cut(s) 661
PspFI CCCAGC 1 cut(s) 1160
PspLI CGTACG 1 cut(s) 831
PspN4I GGNNCC 3 cut(s) 21, 428, 1171
PspPI GGNCC 2 cut(s) 213, 338
PstI CTGCAG 1 cut(s) 931
PsuI RGATCY 3 cut(s) 19, 192, 1229
PsyI GACNNNGTC 1 cut(s) 1115
RruI TCGCGA 1 cut(s) 1225
RsaI GTAC 3 cut(s) 833, 921, 962
RsaNI GTAC 3 cut(s) 832, 920, 961
RseI CAYNNNNRTG 2 cut(s) 239, 432
SalI GTCGAC 1 cut(s) 1242
SapI GCTCTTC 1 cut(s) 822
SaqAI TTAA 5 cut(s) 9, 270, 449, 591, 957
Sau96I GGNCC 2 cut(s) 213, 338
SchI GAGTC 1 cut(s) 703
SduI GDGCHC 1 cut(s) 429
SfaNI GCATC 7 cut(s) 53, 337, 410, 445, 578, 933, 1039
SfcI CTRYAG 2 cut(s) 780, 927
SfoI GGCGCC 1 cut(s) 1171
SfuI TTCGAA 1 cut(s) 373
SinI GGWCC 1 cut(s) 338
SmiMI CAYNNNNRTG 2 cut(s) 239, 432
SphI GCATGC 1 cut(s) 614
SsiI CCGC 9 cut(s) 38, 423, 625, 841, 874, 950, 1141, 1257, 1277
SspDI GGCGCC 1 cut(s) 1169
SspMI CTAG 2 cut(s) 255, 983
StyI CCWWGG 3 cut(s) 15, 225, 1071
TaaI ACNGT 3 cut(s) 168, 776, 1131
TaiI ACGT 3 cut(s) 135, 772, 1206
TaqI TCGA 8 cut(s) 174, 291, 373, 582, 1049, 1177, 1211, 1243
TatI WGTACW 2 cut(s) 919, 960
TauI GCSGC 3 cut(s) 41, 843, 877
TfiI GAWTC 4 cut(s) 442, 497, 865, 1213
Tru1I TTAA 5 cut(s) 9, 270, 449, 591, 957
Tru9I TTAA 5 cut(s) 9, 270, 449, 591, 957
TscAI CASTG 1 cut(s) 1267
TseFI GTSAC 8 cut(s) 230, 306, 598, 661, 770, 1079, 1131, 1204
TseI GCWGC 9 cut(s) 41, 146, 251, 320, 614, 725, 827, 926, 1037
Tsp45I GTSAC 8 cut(s) 230, 306, 598, 661, 770, 1079, 1131, 1204
TspDTI ATGAA 4 cut(s) 711, 809, 869, 1079
TspGWI ACGGA 2 cut(s) 192, 849
TspRI CASTG 1 cut(s) 1267
Tth111I GACNNNGTC 1 cut(s) 1115
Van91I CCANNNNNTGG 1 cut(s) 539
VpaK11BI GGWCC 1 cut(s) 338
XapI RAATTY 2 cut(s) 179, 1051
XceI RCATGY 3 cut(s) 410, 614, 926
XmiI GTMKAC 1 cut(s) 1243
XspI CTAG 2 cut(s) 255, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.