Rroxscaffold_2G00134310

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000319
Physical Location & Seq
Reverse (-)
71791956 .. 71800719
8764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00134310.1

Sequence Viewer

Length: 1746 bp
ATGGAGTTCAATTCCATGGATCCTCCGGTGTATGAGGCGGCAGCATCAGGTGATCTTCGTTTTCTCAAAGAAGTTAGAGATGGAGACAGATCAGTTGATATTCTCTTTCAGAAGACCCCTAAAAACAACAACGTTCTTCATATAGCTGCTCAGTTCAAGCAAACACAGTTCTTCAAGGAATTCCCAAATCAGATTCAATCTCCGTTGTTTTGGGCCACCAACACCAAGGGTGACACTCCCATGCACATTGCTGCTAGGGTAGGTTGTGTTAAACTAATTGAGTTCCTCATCGATCACGCGAGAAAGTCACAAACTGATGCAGCAGATGTGGAGACCGGACCAGCCGATGCTGAAGCTCATAAAGAGTTACTTCGAATGACTAATTCCGAAAGAGATACAGCTTTGCATGTTGCTGTTAAATGCGGGCACCATGATGTTGTGATTCTTTTAATGGATGCTGATCCTGAATTGTGCTGTTATACCAATAACGCCGGTGAATCTCCTTTGTTCTTAGCTGTCTGCAAGGGGTTTCCAAAAATTGGTTCTTATATTTTGGAAAACTCTCCAGCATCTCTTTCTTTCGAGGGGGTTAAAGGTGTCACAGCTTTGCATGCAGCAGTAACCCGCAATTCAACCTGCAAAGATATTGTGGAGATCATGATGTCCAAAAATTCTGAATTGATCAAAGAAGTTGATGAACTTGGTTGGACCCCCTTACACTATGCAGCATTCAAAGGGAATGTTGAAGCAGTTAGAACGCTAATAAAATGCGATAGTTACTGTGGCTTACATCTTGGACAACTGTGGAATGTCTGCCCTTCATGTTGCGGCCCACGCAGGCCGCACAAAAGTAGTGAAAGAGTTAATTCGATTGCGGCCGATACTTGTGATCTGCTTAACCACAAAGGCCAAACGGCTGTACATGCTGCAGTTTTGGGTGAACACCGGGCTGTTATCAAGTACATTTTGAAGACGCCTGAGCTAGCAAGACTTGTAAACGAAGCAGACAATGATGGAAATACTCCTTTGCATTTGGCTGCCTTTAAAAGGAACACTGTAATTTTGAGAACCCGGCAAGGGATTGCAAAGTTGACAAGACTGCAACCAATGATCATCAATCGAAAGCCATTGACATATTCGTTGGTGACGATATTGAACTGGTCTATCGGAGTTCCAATTTTCCAGCGATATGTGCACCATGACTTCATGAAATTGGAATCATCGGAGGAGAAAAAGGCTACATCCACCACAGCGACCATTGCGAACGACAAATCGGTGAAAGCTTCATTGAATGACTCGAAAAGATTTGACACAAATCTAGTAGTTGCCATGCTTATTGCTACTTGTCACTTTCTCAGCAGCTTTCACCATGCAGGGGATTTAATAGCGATGGCATGGCGGTTTTACACCAAAGGATACTTTTCGCAGTGTTCGTGTTATTTGACAGCATCTCCTTCTTCTTATCTCTCTTTGTGGTGTTTAATTATTTCATGGTGTCGACTCGTCACGAAGCATTCTAGCCACACCTTATACACCTTCAATTTTCATTCGCTATTCCATTGCAGCAATGGCGATAACATTTGCTTCGGAATGTTCGTGGTGCTACCGAAGTATAGTCCAATCGGCATTTTGGTCGTTCTAACATGCAGCGCTTTATGCTACATCATCATCCGGGGAGACTCTATTATGTCGCTCTACCAACCGCCCACCAAATCATGCCTCGTTATTGGATCCGATCTCGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

581

Amino Acids

64.58

Weight (kDa)

8.25

Isoelectric Point (pI)

34.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 13 - 104 5.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 123 - 187 3.9e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 198 - 257 3.1e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 203 - 255 7.4e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 296 - 352 1.8e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 644
AccB1I GGYRCC 1 cut(s) 426
AccB7I CCANNNNNTGG 1 cut(s) 539
AccI GTMKAC 1 cut(s) 1498
AccII CGCG 1 cut(s) 299
AciI CCGC 8 cut(s) 38, 423, 625, 828, 842, 875, 1399, 1703
AclI AACGTT 1 cut(s) 132
AclWI GGATC 5 cut(s) 14, 27, 455, 1725, 1738
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 2 cut(s) 179, 670
AcuI CTGAAG 1 cut(s) 372
AcyI GRCGYC 1 cut(s) 974
AfaI GTAC 2 cut(s) 921, 962
AfeI AGCGCT 1 cut(s) 1651
AfiI CCNNNNNNNGG 4 cut(s) 539, 1047, 1077, 1375
AjuI GAANNNNNNNTTGG 2 cut(s) 526, 558
AluBI AGCT 8 cut(s) 146, 356, 401, 515, 605, 982, 1283, 1362
AluI AGCT 8 cut(s) 146, 356, 401, 515, 605, 982, 1283, 1362
Alw21I GWGCWC 1 cut(s) 1197
Alw26I GTCTC 3 cut(s) 78, 326, 1671
Alw44I GTGCAC 1 cut(s) 1193
AlwI GGATC 5 cut(s) 14, 27, 455, 1725, 1738
Aor51HI AGCGCT 1 cut(s) 1651
AoxI GGCC 5 cut(s) 213, 829, 839, 876, 907
ApaLI GTGCAC 1 cut(s) 1193
ApoI RAATTY 2 cut(s) 179, 670
AspLEI GCGC 1 cut(s) 1652
AspS9I GGNCC 4 cut(s) 213, 338, 708, 830
AsuC2I CCSGG 3 cut(s) 947, 1072, 1673
AsuHPI GGTGA 7 cut(s) 62, 242, 506, 950, 1156, 1288, 1358
AsuII TTCGAA 1 cut(s) 373
AsuNHI GCTAGC 1 cut(s) 982
AvaII GGWCC 2 cut(s) 338, 708
BaeGI GKGCMC 2 cut(s) 429, 1197
BamHI GGATCC 2 cut(s) 19, 1730
BanI GGYRCC 1 cut(s) 426
BbsI GAAGAC 2 cut(s) 119, 977
Bbv12I GWGCWC 1 cut(s) 1197
BccI CCATC 3 cut(s) 74, 1007, 1384
BceAI ACGGC 1 cut(s) 930
BcgI CGANNNNNNTGC 2 cut(s) 1615, 1649
BciVI GTATCC 1 cut(s) 1409
BclI TGATCA 2 cut(s) 681, 1110
BcnI CCSGG 3 cut(s) 947, 1072, 1673
BcoDI GTCTC 3 cut(s) 78, 326, 1671
BfaI CTAG 4 cut(s) 255, 983, 1319, 1518
BfmI CTRYAG 1 cut(s) 927
BfoI RGCGCY 1 cut(s) 1653
BfuAI ACCTGC 1 cut(s) 644
BfuI GTATCC 1 cut(s) 1409
Bme1390I CCNGG 3 cut(s) 947, 1072, 1673
Bme18I GGWCC 2 cut(s) 338, 708
BmgT120I GGNCC 4 cut(s) 213, 338, 708, 830
BmiI GGNNCC 4 cut(s) 21, 428, 710, 1732
BmrFI CCNGG 3 cut(s) 947, 1072, 1673
BmsI GCATC 6 cut(s) 53, 307, 337, 445, 578, 1457
BmtI GCTAGC 1 cut(s) 986
BpiI GAAGAC 2 cut(s) 119, 977
BpmI CTGGAG 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 978
Bpu14I TTCGAA 1 cut(s) 373
BpuMI CCSGG 3 cut(s) 947, 1072, 1673
Bsa29I ATCGAT 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 974
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 3 cut(s) 15, 225, 1672
BsaWI WCCGGW 2 cut(s) 25, 335
BsaXI ACNNNNNCTCC 2 cut(s) 1435, 1465
Bsc4I CCNNNNNNNGG 4 cut(s) 539, 1047, 1077, 1375
Bse118I RCCGGY 1 cut(s) 491
Bse1I ACTGG 1 cut(s) 1163
Bse3DI GCAATG 4 cut(s) 246, 1257, 1558, 1573
Bse8I GATNNNNATC 1 cut(s) 459
BseCI ATCGAT 1 cut(s) 291
BseDI CCNNGG 3 cut(s) 15, 225, 1672
BseGI GGATG 3 cut(s) 460, 1241, 1668
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 4 cut(s) 539, 1047, 1077, 1375
BseMI GCAATG 4 cut(s) 246, 1257, 1558, 1573
BseMII CTCAG 3 cut(s) 164, 969, 1369
BseNI ACTGG 1 cut(s) 1163
BseRI GAGGAG 1 cut(s) 1241
BseSI GKGCMC 2 cut(s) 429, 1197
BseX3I CGGCCG 1 cut(s) 876
Bsh1236I CGCG 1 cut(s) 299
Bsh1285I CGRYCG 1 cut(s) 879
BshFI GGCC 5 cut(s) 215, 831, 841, 878, 909
BshNI GGYRCC 1 cut(s) 426
BshVI ATCGAT 1 cut(s) 291
BsiEI CGRYCG 1 cut(s) 879
BsiHKAI GWGCWC 1 cut(s) 1197
BsiSI CCGG 6 cut(s) 26, 336, 492, 946, 1072, 1672
BslI CCNNNNNNNGG 4 cut(s) 539, 1047, 1077, 1375
BsmAI GTCTC 3 cut(s) 78, 326, 1671
BsmI GAATGC 2 cut(s) 728, 1513
BsnI GGCC 5 cut(s) 215, 831, 841, 878, 909
Bso31I GGTCTC 1 cut(s) 326
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 2 cut(s) 429, 1197
Bsp1407I TGTACA 1 cut(s) 919
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 8 cut(s) 38, 423, 625, 828, 842, 875, 1399, 1703
BspANI GGCC 5 cut(s) 215, 831, 841, 878, 909
BspCNI CTCAG 3 cut(s) 163, 970, 1368
BspDI ATCGAT 1 cut(s) 291
BspFNI CGCG 1 cut(s) 299
BspHI TCATGA 2 cut(s) 657, 1206
BspLI GGNNCC 4 cut(s) 21, 428, 710, 1732
BspMAI CTGCAG 1 cut(s) 931
BspMI ACCTGC 1 cut(s) 644
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 5 cut(s) 14, 27, 455, 1725, 1738
BspT104I TTCGAA 1 cut(s) 373
BspT107I GGYRCC 1 cut(s) 426
BspTNI GGTCTC 1 cut(s) 326
BsrDI GCAATG 4 cut(s) 246, 1257, 1558, 1573
BsrFI RCCGGY 1 cut(s) 491
BsrGI TGTACA 1 cut(s) 919
BsrI ACTGG 1 cut(s) 1163
BssAI RCCGGY 1 cut(s) 491
BssECI CCNNGG 3 cut(s) 15, 225, 1672
BssNI GRCGYC 1 cut(s) 974
BssT1I CCWWGG 2 cut(s) 15, 225
Bst4CI ACNGT 4 cut(s) 168, 782, 804, 1057
BstACI GRCGYC 1 cut(s) 974
BstAUI TGTACA 1 cut(s) 919
BstBI TTCGAA 1 cut(s) 373
BstC8I GCNNGC 4 cut(s) 425, 612, 839, 984
BstDEI CTNAG 4 cut(s) 150, 511, 978, 1355
BstDSI CCRYGG 1 cut(s) 15
BstENI CCTNNNNNAGG 1 cut(s) 1045
BstF5I GGATG 3 cut(s) 460, 1241, 1668
BstFNI CGCG 1 cut(s) 299
BstH2I RGCGCY 1 cut(s) 1653
BstHHI GCGC 1 cut(s) 1652
BstMAI GTCTC 3 cut(s) 78, 326, 1671
BstMCI CGRYCG 1 cut(s) 879
BstMWI GCNNNNNNNGC 7 cut(s) 611, 834, 923, 1192, 1259, 1569, 1656
BstNSI RCATGY 4 cut(s) 410, 614, 926, 1647
BstSCI CCNGG 3 cut(s) 945, 1070, 1671
BstSFI CTRYAG 1 cut(s) 927
BstSLI GKGCMC 2 cut(s) 429, 1197
BstUI CGCG 1 cut(s) 299
BstV2I GAAGAC 2 cut(s) 119, 977
BstX2I RGATCY 2 cut(s) 19, 1730
BstYI RGATCY 2 cut(s) 19, 1730
BstZI CGGCCG 1 cut(s) 876
Bsu15I ATCGAT 1 cut(s) 291
BsuI GTATCC 1 cut(s) 1409
BsuRI GGCC 5 cut(s) 215, 831, 841, 878, 909
BsuTUI ATCGAT 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 15
BtgZI GCGATG 1 cut(s) 1403
BtsCI GGATG 3 cut(s) 460, 1241, 1668
BtsI GCAGTG 1 cut(s) 1433
BtsIMutI CAGTG 2 cut(s) 1053, 1433
BveI ACCTGC 1 cut(s) 644
Cac8I GCNNGC 4 cut(s) 425, 612, 839, 984
CciI TCATGA 2 cut(s) 657, 1206
CfoI GCGC 1 cut(s) 1652
Cfr10I RCCGGY 1 cut(s) 491
Cfr13I GGNCC 4 cut(s) 213, 338, 708, 830
ClaI ATCGAT 1 cut(s) 291
CseI GACGC 1 cut(s) 982
Csp6I GTAC 2 cut(s) 920, 961
CviQI GTAC 2 cut(s) 920, 961
DdeI CTNAG 4 cut(s) 150, 511, 978, 1355
DraI TTTAAA 1 cut(s) 1045
EaeI YGGCCR 1 cut(s) 876
EagI CGGCCG 1 cut(s) 876
EclXI CGGCCG 1 cut(s) 876
Eco130I CCWWGG 2 cut(s) 15, 225
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 2 cut(s) 338, 708
Eco47III AGCGCT 1 cut(s) 1651
Eco52I CGGCCG 1 cut(s) 876
Eco57I CTGAAG 1 cut(s) 372
EcoNI CCTNNNNNAGG 1 cut(s) 1045
EcoRI GAATTC 1 cut(s) 179
EcoT14I CCWWGG 2 cut(s) 15, 225
ErhI CCWWGG 2 cut(s) 15, 225
FalI AAGNNNNNCTT 2 cut(s) 354, 386
FauI CCCGC 2 cut(s) 416, 632
FbaI TGATCA 2 cut(s) 681, 1110
FblI GTMKAC 1 cut(s) 1498
FokI GGATG 3 cut(s) 467, 1228, 1655
FspBI CTAG 4 cut(s) 255, 983, 1319, 1518
GlaI GCGC 1 cut(s) 1651
GsuI CTGGAG 1 cut(s) 549
HaeII RGCGCY 1 cut(s) 1653
HaeIII GGCC 5 cut(s) 215, 831, 841, 878, 909
HapII CCGG 6 cut(s) 26, 336, 492, 946, 1072, 1672
HgaI GACGC 1 cut(s) 982
HhaI GCGC 1 cut(s) 1652
Hin1I GRCGYC 1 cut(s) 974
Hin6I GCGC 1 cut(s) 1650
HinP1I GCGC 1 cut(s) 1650
HincII GTYRAC 2 cut(s) 1092, 1499
HindII GTYRAC 2 cut(s) 1092, 1499
HindIII AAGCTT 1 cut(s) 1281
HinfI GANTC 7 cut(s) 193, 442, 497, 1217, 1295, 1500, 1679
HpaII CCGG 6 cut(s) 26, 336, 492, 946, 1072, 1672
HphI GGTGA 7 cut(s) 62, 242, 506, 950, 1156, 1288, 1358
Hpy166II GTNNAC 5 cut(s) 941, 997, 1092, 1195, 1499
Hpy188I TCNGA 8 cut(s) 111, 192, 388, 676, 1169, 1225, 1589, 1735
Hpy188III TCNNGA 4 cut(s) 464, 658, 1207, 1507
Hpy8I GTNNAC 5 cut(s) 941, 997, 1092, 1195, 1499
HpyAV CCTTC 3 cut(s) 828, 1464, 1546
HpyCH4III ACNGT 4 cut(s) 168, 782, 804, 1057
HpyCH4IV ACGT 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 7 cut(s) 611, 834, 923, 1192, 1259, 1569, 1656
HpyF3I CTNAG 4 cut(s) 150, 511, 978, 1355
HpySE526I ACGT 1 cut(s) 132
Hsp92I GRCGYC 1 cut(s) 974
HspAI GCGC 1 cut(s) 1650
Ksp22I TGATCA 2 cut(s) 681, 1110
LweI GCATC 6 cut(s) 53, 307, 337, 445, 578, 1457
MaeI CTAG 4 cut(s) 255, 983, 1319, 1518
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 9 cut(s) 230, 306, 366, 598, 619, 776, 1144, 1346, 1504
MboII GAAGA 6 cut(s) 47, 124, 128, 163, 982, 1449
MflI RGATCY 2 cut(s) 19, 1730
MhlI GDGCHC 2 cut(s) 429, 1197
MlyI GAGTC 3 cut(s) 1289, 1494, 1673
MmeI TCCRAC 1 cut(s) 686
MnlI CCTC 6 cut(s) 28, 33, 296, 577, 1219, 1730
MseI TTAA 9 cut(s) 270, 417, 449, 591, 864, 897, 1044, 1382, 1481
MslI CAYNNNNRTG 2 cut(s) 239, 432
MspI CCGG 6 cut(s) 26, 336, 492, 946, 1072, 1672
MspR9I CCNGG 3 cut(s) 947, 1072, 1673
Mva1269I GAATGC 2 cut(s) 728, 1513
MvnI CGCG 1 cut(s) 299
MwoI GCNNNNNNNGC 7 cut(s) 611, 834, 923, 1192, 1259, 1569, 1656
NciI CCSGG 3 cut(s) 947, 1072, 1673
NcoI CCATGG 1 cut(s) 15
NheI GCTAGC 1 cut(s) 982
NlaIV GGNNCC 4 cut(s) 21, 428, 710, 1732
NmuCI GTSAC 6 cut(s) 230, 306, 598, 1144, 1346, 1504
NspI RCATGY 4 cut(s) 410, 614, 926, 1647
NspV TTCGAA 1 cut(s) 373
PaeI GCATGC 1 cut(s) 614
PagI TCATGA 2 cut(s) 657, 1206
PcsI WCGNNNNNNNCGW 3 cut(s) 1145, 1430, 1593
PctI GAATGC 2 cut(s) 728, 1513
PfeI GAWTC 4 cut(s) 193, 442, 497, 1217
PflMI CCANNNNNTGG 1 cut(s) 539
PleI GAGTC 3 cut(s) 1289, 1494, 1673
PpsI GAGTC 3 cut(s) 1289, 1494, 1673
Psp1406I AACGTT 1 cut(s) 132
PspN4I GGNNCC 4 cut(s) 21, 428, 710, 1732
PspPI GGNCC 4 cut(s) 213, 338, 708, 830
PstI CTGCAG 1 cut(s) 931
PsuI RGATCY 2 cut(s) 19, 1730
RsaI GTAC 2 cut(s) 921, 962
RsaNI GTAC 2 cut(s) 920, 961
RseI CAYNNNNRTG 2 cut(s) 239, 432
SalI GTCGAC 1 cut(s) 1497
SaqAI TTAA 9 cut(s) 270, 417, 449, 591, 864, 897, 1044, 1382, 1481
Sau96I GGNCC 4 cut(s) 213, 338, 708, 830
SchI GAGTC 3 cut(s) 1289, 1494, 1673
ScrFI CCNGG 3 cut(s) 947, 1072, 1673
SduI GDGCHC 2 cut(s) 429, 1197
SfaNI GCATC 6 cut(s) 53, 307, 337, 445, 578, 1457
SfcI CTRYAG 1 cut(s) 927
SfuI TTCGAA 1 cut(s) 373
SgrAI CRCCGGYG 1 cut(s) 491
SinI GGWCC 2 cut(s) 338, 708
SmiMI CAYNNNNRTG 2 cut(s) 239, 432
SphI GCATGC 1 cut(s) 614
SsiI CCGC 8 cut(s) 38, 423, 625, 828, 842, 875, 1399, 1703
SspMI CTAG 4 cut(s) 255, 983, 1319, 1518
StyD4I CCNGG 3 cut(s) 945, 1070, 1671
StyI CCWWGG 2 cut(s) 15, 225
TaaI ACNGT 4 cut(s) 168, 782, 804, 1057
TaiI ACGT 1 cut(s) 135
TaqI TCGA 7 cut(s) 291, 373, 582, 869, 1120, 1298, 1498
TatI WGTACW 2 cut(s) 919, 960
TauI GCSGC 4 cut(s) 41, 831, 844, 878
TfiI GAWTC 4 cut(s) 193, 442, 497, 1217
Tru1I TTAA 9 cut(s) 270, 417, 449, 591, 864, 897, 1044, 1382, 1481
Tru9I TTAA 9 cut(s) 270, 417, 449, 591, 864, 897, 1044, 1382, 1481
TscAI CASTG 2 cut(s) 1060, 1433
TseFI GTSAC 6 cut(s) 230, 306, 598, 1144, 1346, 1504
Tsp45I GTSAC 6 cut(s) 230, 306, 598, 1144, 1346, 1504
TspDTI ATGAA 8 cut(s) 128, 711, 810, 1195, 1223, 1275, 1479, 1535
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 2 cut(s) 1060, 1433
Van91I CCANNNNNTGG 1 cut(s) 539
VneI GTGCAC 1 cut(s) 1193
VpaK11BI GGWCC 2 cut(s) 338, 708
XagI CCTNNNNNAGG 1 cut(s) 1045
XapI RAATTY 2 cut(s) 179, 670
XceI RCATGY 4 cut(s) 410, 614, 926, 1647
XcmI CCANNNNNNNNNTGG 1 cut(s) 1565
XmiI GTMKAC 1 cut(s) 1498
XspI CTAG 4 cut(s) 255, 983, 1319, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.