Rh2AG211500

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000319
Physical Location & Seq
Forward (+)
21523710 .. 21532908
9199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG211500.1

Sequence Viewer

Length: 1797 bp
ATGGAGTTCAGTGCCATATGCATGGATCCTTTGCTGTATGAAGCGGCTGCATGCGGTGATATTCAATTTCTCAAAGAAGTTAGAGATGGGGAGAGATCAGTTGATATATTTCAGAAGACCCCTAAAGCCAACAACGTTCTTCACATAGCTGCTCAGTTCAAGCAAACACAGTTCTTCAAGGAATTCCCAAATCAGATTCAATCTCCGTTGTTTTGGGCCACCAACACCAAGGGTGACACACCCATGCACATTGCTGCTAGGGTAGGTTGTGTCAAACTAGTTGAGTTCCTCATCGATCACGCAAGAAAGTTACAGACTGATGCAGCAGATGAGGAGACCGGACCAGCCGATGCTGAAGCTTATAAAGAGTTACTTCGAATTACTAATTCGGAAAAAGATACAGCTTTGCATGTTGCTGTTAAATGCGGGCACCATGATGTTGTGATTTTGTTAATGGATGCTGATCCAGAATTGTGTTGTTATACCAATAATGCCAATGAATCTCCATTGTTCTTAGCTATCTGCAAGGGGTTTCCAAAAATTGGTTCTTGTATTTTGGACAAGTCTCCAACATCTCTTTCTTTCGAGGGGGTTAAAGGTATCACAGCTTTGCATGCAGCAGTAACCCGCAATTCAACCTGCAAAGATATTGTGGAGATTATGGTGTCCAAAAATCCTGAATTGATCAAAGAAGTTGATGAACTTGGTTGGACCCCCTTACACTATGCAGCATTCAGAGGGAATGTTGAAGCAATTAGAACGCTGATAAAATGCGATAGTTACGTGGTTTACATCTTGGACAAATGTGGAATGTCTGCTCTTCATGTTGCGGCCCACGCAGGGCGCACAAAAGTAGTGAAAGAGTTAATTCGATTGCGGCCTGATACTTGTGATCTGCTCAACCACAAAGGCCAAACGGCTGTACATGCTGCAGTTTTGGGTGAACACCGGACTGTTATCAAGTACATTTTGAAGACGCCTGAGCTAGCAAGACTTGTAAACGAAGCAGACAATGATGGAAATACTCCTTTGCATCTGGCTGCCTTTCAAGGGAATACCAAAATTATGAAACTATTGGCAAGGGACCGCAAAGTTGACAAGACTGCAACCAATGATCATCACTCAAAAGCCGTTGATATACTCGTTGGTGACGATATTGAACTGGATACCTCTTACAGGAAGGGGATCACGCGCCTTTTAGGGAAGTCTATCGGCGTGCCAATTTTCCAGCGATATGTGCGCCGTGACTTCATGAAATTGAAATCATCGGAGAAGAAAAAGGCTACATCCACCACAGCAACCATTGCGAACGACAAATCAGTGAAAGCTTCGTTGGATAACTCGAAAAGATTTGACACAAATCTAGTAGTTGCCATGCTTATTGCTACCGTCACTTTCTCAGCAGCTTTCACCATGCCCGGGGGATTTAATAGCGATGGCATGGCGGTTTTACGCCAAAGGATACTTTTCGCAGTGTTCGTGTTATCTGACAGCATCTCCTTCTTCTTATCTCTCTTTGTGGTGTTTAATTATTTAATGGTGTCGACTCTGTCACGAAGCATTCTAGCCACACCTTATACACCTTCAGTTTTCATTCGCTATTCCATTGCAGCAATGGGGGTAACATTTGCTTCTGGAATGTTTATGGTGCTACCGACGTATAGTCCACTCGGCATTTTGGTCGTTGTAATATGCAGCGCTGTATGCTACTGCATCATTGGAAAGAGTTATTATGCCGCTCTACCAACCGCCCACCAAATCGGGCATCGTAATTGGATCCGATCCCGCAAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

598

Amino Acids

66.1

Weight (kDa)

8.79

Isoelectric Point (pI)

25.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 12 - 102 2.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 122 - 184 1.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 199 - 259 6.5e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 204 - 256 1.9e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 274 - 370 1.3e-15 Ankyrin repeats (3 copies)
Ank_4 PF13637 274 - 323 4.6e-06 Ankyrin repeats (many copies)
Ank PF00023 339 - 371 9.8e-06 Ankyrin repeat
PGG PF13962 449 - 550 1.1e-19 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 363
Acc36I ACCTGC 1 cut(s) 647
AccB1I GGYRCC 1 cut(s) 429
AccB7I CCANNNNNTGG 1 cut(s) 542
AccBSI CCGCTC 1 cut(s) 1739
AccI GTMKAC 1 cut(s) 1544
AccII CGCG 1 cut(s) 1192
AclI AACGTT 1 cut(s) 135
AclWI GGATC 7 cut(s) 20, 33, 458, 1193, 1771, 1776, 1784
AcsI RAATTY 2 cut(s) 182, 1791
AcuI CTGAAG 2 cut(s) 375, 1569
AcyI GRCGYC 1 cut(s) 977
AfaI GTAC 2 cut(s) 924, 965
AfeI AGCGCT 1 cut(s) 1699
AfiI CCNNNNNNNGG 5 cut(s) 542, 840, 1050, 1176, 1419
AhdI GACNNNNNGTC 1 cut(s) 1662
AhlI ACTAGT 1 cut(s) 277
AjuI GAANNNNNNNTTGG 6 cut(s) 529, 561, 562, 594, 1316, 1348
AluBI AGCT 8 cut(s) 149, 359, 404, 518, 608, 985, 1328, 1406
AluI AGCT 8 cut(s) 149, 359, 404, 518, 608, 985, 1328, 1406
Alw26I GTCTC 2 cut(s) 329, 570
AlwI GGATC 7 cut(s) 20, 33, 458, 1193, 1771, 1776, 1784
Ama87I CYCGRG 1 cut(s) 1418
Aor51HI AGCGCT 1 cut(s) 1699
AoxI GGCC 4 cut(s) 216, 831, 878, 910
ApoI RAATTY 2 cut(s) 182, 1791
AspLEI GCGC 4 cut(s) 846, 1194, 1242, 1700
AspS9I GGNCC 5 cut(s) 216, 341, 711, 832, 1084
AsuC2I CCSGG 2 cut(s) 1419, 1420
AsuHPI GGTGA 5 cut(s) 68, 245, 953, 1160, 1402
AsuII TTCGAA 1 cut(s) 376
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 1418
AvaII GGWCC 3 cut(s) 341, 711, 1084
BaeGI GKGCMC 1 cut(s) 432
BamHI GGATCC 2 cut(s) 25, 1776
BanI GGYRCC 1 cut(s) 429
BbsI GAAGAC 2 cut(s) 122, 980
BccI CCATC 3 cut(s) 80, 1010, 1430
BceAI ACGGC 3 cut(s) 933, 1115, 1227
BcgI CGANNNNNNTGC 2 cut(s) 1663, 1697
BciVI GTATCC 2 cut(s) 1159, 1455
BclI TGATCA 2 cut(s) 684, 1114
BcnI CCSGG 2 cut(s) 1419, 1420
BcoDI GTCTC 2 cut(s) 329, 570
BcuI ACTAGT 1 cut(s) 277
BfaI CTAG 5 cut(s) 258, 278, 986, 1364, 1565
BfmI CTRYAG 1 cut(s) 930
BfoI RGCGCY 1 cut(s) 1701
BfuAI ACCTGC 1 cut(s) 647
BfuI GTATCC 2 cut(s) 1159, 1455
Bme1390I CCNGG 2 cut(s) 1419, 1420
Bme18I GGWCC 3 cut(s) 341, 711, 1084
BmeRI GACNNNNNGTC 1 cut(s) 1662
BmeT110I CYCGRG 1 cut(s) 1418
BmgT120I GGNCC 5 cut(s) 216, 341, 711, 832, 1084
BmiI GGNNCC 5 cut(s) 27, 431, 713, 1085, 1778
BmrFI CCNGG 2 cut(s) 1419, 1420
BmsI GCATC 7 cut(s) 310, 340, 448, 1042, 1503, 1722, 1774
BmtI GCTAGC 1 cut(s) 989
BpiI GAAGAC 2 cut(s) 122, 980
Bpu10I CCTNAGC 1 cut(s) 981
Bpu14I TTCGAA 1 cut(s) 376
BpuMI CCSGG 2 cut(s) 1419, 1420
Bsa29I ATCGAT 1 cut(s) 294
BsaAI YACGTR 1 cut(s) 784
BsaBI GATNNNNATC 1 cut(s) 462
BsaHI GRCGYC 1 cut(s) 977
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 3 cut(s) 228, 1418, 1419
BsaWI WCCGGW 2 cut(s) 338, 948
BsaXI ACNNNNNCTCC 2 cut(s) 1481, 1511
Bsc4I CCNNNNNNNGG 5 cut(s) 542, 840, 1050, 1176, 1419
Bse1I ACTGG 1 cut(s) 1167
Bse3DI GCAATG 4 cut(s) 249, 1302, 1605, 1620
Bse8I GATNNNNATC 1 cut(s) 462
BseCI ATCGAT 1 cut(s) 294
BseDI CCNNGG 3 cut(s) 228, 1418, 1419
BseGI GGATG 2 cut(s) 463, 1286
BseJI GATNNNNATC 1 cut(s) 462
BseLI CCNNNNNNNGG 5 cut(s) 542, 840, 1050, 1176, 1419
BseMI GCAATG 4 cut(s) 249, 1302, 1605, 1620
BseMII CTCAG 3 cut(s) 167, 972, 1413
BseNI ACTGG 1 cut(s) 1167
BseRI GAGGAG 1 cut(s) 347
BseSI GKGCMC 1 cut(s) 432
Bsh1236I CGCG 1 cut(s) 1192
BshFI GGCC 4 cut(s) 218, 833, 880, 912
BshNI GGYRCC 1 cut(s) 429
BshVI ATCGAT 1 cut(s) 294
BsiHKCI CYCGRG 1 cut(s) 1418
BsiSI CCGG 3 cut(s) 339, 949, 1419
BslFI GGGAC 1 cut(s) 1097
BslI CCNNNNNNNGG 5 cut(s) 542, 840, 1050, 1176, 1419
BsmAI GTCTC 2 cut(s) 329, 570
BsmFI GGGAC 1 cut(s) 1097
BsmI GAATGC 2 cut(s) 731, 1560
BsnI GGCC 4 cut(s) 218, 833, 880, 912
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 1418
Bsp119I TTCGAA 1 cut(s) 376
Bsp1286I GDGCHC 1 cut(s) 432
Bsp1407I TGTACA 1 cut(s) 922
BspANI GGCC 4 cut(s) 218, 833, 880, 912
BspCNI CTCAG 3 cut(s) 166, 973, 1412
BspDI ATCGAT 1 cut(s) 294
BspFNI CGCG 1 cut(s) 1192
BspHI TCATGA 1 cut(s) 1251
BspLI GGNNCC 5 cut(s) 27, 431, 713, 1085, 1778
BspMAI CTGCAG 1 cut(s) 934
BspMI ACCTGC 1 cut(s) 647
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 7 cut(s) 20, 33, 458, 1193, 1771, 1776, 1784
BspQI GCTCTTC 1 cut(s) 825
BspT104I TTCGAA 1 cut(s) 376
BspT107I GGYRCC 1 cut(s) 429
BspTNI GGTCTC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 1739
BsrDI GCAATG 4 cut(s) 249, 1302, 1605, 1620
BsrGI TGTACA 1 cut(s) 922
BsrI ACTGG 1 cut(s) 1167
BssECI CCNNGG 3 cut(s) 228, 1418, 1419
BssNI GRCGYC 1 cut(s) 977
BssT1I CCWWGG 1 cut(s) 228
Bst4CI ACNGT 3 cut(s) 171, 955, 1390
Bst6I CTCTTC 1 cut(s) 825
BstACI GRCGYC 1 cut(s) 977
BstAPI GCANNNNNTGC 1 cut(s) 1304
BstAUI TGTACA 1 cut(s) 922
BstBAI YACGTR 1 cut(s) 784
BstBI TTCGAA 1 cut(s) 376
BstC8I GCNNGC 5 cut(s) 52, 428, 615, 987, 1217
BstDEI CTNAG 4 cut(s) 153, 514, 981, 1399
BstENI CCTNNNNNAGG 1 cut(s) 1174
BstF5I GGATG 2 cut(s) 463, 1286
BstFNI CGCG 1 cut(s) 1192
BstH2I RGCGCY 1 cut(s) 1701
BstHHI GCGC 4 cut(s) 846, 1194, 1242, 1700
BstMAI GTCTC 2 cut(s) 329, 570
BstMWI GCNNNNNNNGC 6 cut(s) 614, 836, 926, 1237, 1304, 1704
BstNSI RCATGY 4 cut(s) 54, 413, 617, 929
BstSCI CCNGG 2 cut(s) 1417, 1418
BstSFI CTRYAG 1 cut(s) 930
BstSLI GKGCMC 1 cut(s) 432
BstUI CGCG 1 cut(s) 1192
BstV2I GAAGAC 2 cut(s) 122, 980
BstX2I RGATCY 2 cut(s) 25, 1776
BstXI CCANNNNNNTGG 1 cut(s) 22
BstYI RGATCY 2 cut(s) 25, 1776
Bsu15I ATCGAT 1 cut(s) 294
BsuI GTATCC 2 cut(s) 1159, 1455
BsuRI GGCC 4 cut(s) 218, 833, 880, 912
BsuTUI ATCGAT 1 cut(s) 294
BtgZI GCGATG 1 cut(s) 1449
BtsCI GGATG 2 cut(s) 463, 1286
BtsI GCAGTG 1 cut(s) 1479
BtsIMutI CAGTG 3 cut(s) 16, 1326, 1479
BveI ACCTGC 1 cut(s) 647
Cac8I GCNNGC 5 cut(s) 52, 428, 615, 987, 1217
CciI TCATGA 1 cut(s) 1251
CfoI GCGC 4 cut(s) 846, 1194, 1242, 1700
Cfr13I GGNCC 5 cut(s) 216, 341, 711, 832, 1084
Cfr9I CCCGGG 1 cut(s) 1418
ClaI ATCGAT 1 cut(s) 294
CseI GACGC 1 cut(s) 985
Csp6I GTAC 2 cut(s) 923, 964
CviQI GTAC 2 cut(s) 923, 964
DdeI CTNAG 4 cut(s) 153, 514, 981, 1399
DriI GACNNNNNGTC 1 cut(s) 1662
Eam1104I CTCTTC 1 cut(s) 825
Eam1105I GACNNNNNGTC 1 cut(s) 1662
EarI CTCTTC 1 cut(s) 825
Eco130I CCWWGG 1 cut(s) 228
Eco31I GGTCTC 1 cut(s) 329
Eco47I GGWCC 3 cut(s) 341, 711, 1084
Eco47III AGCGCT 1 cut(s) 1699
Eco57I CTGAAG 2 cut(s) 375, 1569
Eco88I CYCGRG 1 cut(s) 1418
EcoNI CCTNNNNNAGG 1 cut(s) 1174
EcoRI GAATTC 1 cut(s) 182
EcoT14I CCWWGG 1 cut(s) 228
EcoT22I ATGCAT 1 cut(s) 23
ErhI CCWWGG 1 cut(s) 228
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FaqI GGGAC 1 cut(s) 1097
FauI CCCGC 3 cut(s) 419, 635, 1793
FauNDI CATATG 1 cut(s) 17
FbaI TGATCA 2 cut(s) 684, 1114
FblI GTMKAC 1 cut(s) 1544
FokI GGATG 2 cut(s) 470, 1273
FspBI CTAG 5 cut(s) 258, 278, 986, 1364, 1565
GlaI GCGC 4 cut(s) 845, 1193, 1241, 1699
HaeII RGCGCY 1 cut(s) 1701
HaeIII GGCC 4 cut(s) 218, 833, 880, 912
HapII CCGG 3 cut(s) 339, 949, 1419
HgaI GACGC 1 cut(s) 985
HhaI GCGC 4 cut(s) 846, 1194, 1242, 1700
Hin1I GRCGYC 1 cut(s) 977
Hin6I GCGC 4 cut(s) 844, 1192, 1240, 1698
HinP1I GCGC 4 cut(s) 844, 1192, 1240, 1698
HincII GTYRAC 2 cut(s) 1096, 1545
HindII GTYRAC 2 cut(s) 1096, 1545
HindIII AAGCTT 2 cut(s) 357, 1326
HinfI GANTC 3 cut(s) 196, 500, 1546
HpaII CCGG 3 cut(s) 339, 949, 1419
HphI GGTGA 5 cut(s) 68, 245, 953, 1160, 1402
Hpy166II GTNNAC 6 cut(s) 790, 944, 1000, 1096, 1545, 1667
Hpy188I TCNGA 7 cut(s) 114, 195, 391, 737, 1270, 1489, 1781
Hpy188III TCNNGA 5 cut(s) 467, 677, 1252, 1554, 1635
Hpy8I GTNNAC 6 cut(s) 790, 944, 1000, 1096, 1545, 1667
Hpy99I CGWCG 1 cut(s) 1660
HpyAV CCTTC 3 cut(s) 1174, 1510, 1593
HpyCH4III ACNGT 3 cut(s) 171, 955, 1390
HpyCH4IV ACGT 3 cut(s) 135, 783, 1658
HpyF10VI GCNNNNNNNGC 6 cut(s) 614, 836, 926, 1237, 1304, 1704
HpyF3I CTNAG 4 cut(s) 153, 514, 981, 1399
HpySE526I ACGT 3 cut(s) 135, 783, 1658
Hsp92I GRCGYC 1 cut(s) 977
HspAI GCGC 4 cut(s) 844, 1192, 1240, 1698
Ksp22I TGATCA 2 cut(s) 684, 1114
LguI GCTCTTC 1 cut(s) 825
LweI GCATC 7 cut(s) 310, 340, 448, 1042, 1503, 1722, 1774
MaeI CTAG 5 cut(s) 258, 278, 986, 1364, 1565
MaeII ACGT 3 cut(s) 135, 783, 1658
MbiI CCGCTC 1 cut(s) 1739
MboII GAAGA 7 cut(s) 127, 131, 166, 812, 985, 1285, 1495
MflI RGATCY 2 cut(s) 25, 1776
MhlI GDGCHC 1 cut(s) 432
MlyI GAGTC 1 cut(s) 1540
MmeI TCCRAC 3 cut(s) 593, 689, 1314
MnlI CCTC 5 cut(s) 299, 325, 580, 731, 1180
Mph1103I ATGCAT 1 cut(s) 23
MseI TTAA 8 cut(s) 420, 452, 594, 866, 1428, 1527, 1535, 1795
MslI CAYNNNNRTG 3 cut(s) 20, 242, 435
MspI CCGG 3 cut(s) 339, 949, 1419
MspR9I CCNGG 2 cut(s) 1419, 1420
Mva1269I GAATGC 2 cut(s) 731, 1560
MvnI CGCG 1 cut(s) 1192
MwoI GCNNNNNNNGC 6 cut(s) 614, 836, 926, 1237, 1304, 1704
NciI CCSGG 2 cut(s) 1419, 1420
NdeI CATATG 1 cut(s) 17
NheI GCTAGC 1 cut(s) 985
NlaIV GGNNCC 5 cut(s) 27, 431, 713, 1085, 1778
NmeAIII GCCGAG 1 cut(s) 1650
NmuCI GTSAC 5 cut(s) 233, 1148, 1244, 1390, 1551
NsiI ATGCAT 1 cut(s) 23
NspI RCATGY 4 cut(s) 54, 413, 617, 929
NspV TTCGAA 1 cut(s) 376
PaeI GCATGC 2 cut(s) 54, 617
PagI TCATGA 1 cut(s) 1251
PciSI GCTCTTC 1 cut(s) 825
PcsI WCGNNNNNNNCGW 2 cut(s) 1149, 1476
PctI GAATGC 2 cut(s) 731, 1560
PfeI GAWTC 2 cut(s) 196, 500
PflFI GACNNNGTC 1 cut(s) 1549
PflMI CCANNNNNTGG 1 cut(s) 542
PleI GAGTC 1 cut(s) 1540
PpsI GAGTC 1 cut(s) 1540
Ppu21I YACGTR 1 cut(s) 784
PsiI TTATAA 1 cut(s) 363
Psp1406I AACGTT 1 cut(s) 135
PspN4I GGNNCC 5 cut(s) 27, 431, 713, 1085, 1778
PspPI GGNCC 5 cut(s) 216, 341, 711, 832, 1084
PstI CTGCAG 1 cut(s) 934
PsuI RGATCY 2 cut(s) 25, 1776
PsyI GACNNNGTC 1 cut(s) 1549
RsaI GTAC 2 cut(s) 924, 965
RsaNI GTAC 2 cut(s) 923, 964
RseI CAYNNNNRTG 3 cut(s) 20, 242, 435
SalI GTCGAC 1 cut(s) 1543
SapI GCTCTTC 1 cut(s) 825
SaqAI TTAA 8 cut(s) 420, 452, 594, 866, 1428, 1527, 1535, 1795
Sau96I GGNCC 5 cut(s) 216, 341, 711, 832, 1084
SchI GAGTC 1 cut(s) 1540
ScrFI CCNGG 2 cut(s) 1419, 1420
SduI GDGCHC 1 cut(s) 432
SfaNI GCATC 7 cut(s) 310, 340, 448, 1042, 1503, 1722, 1774
SfcI CTRYAG 1 cut(s) 930
SfuI TTCGAA 1 cut(s) 376
SinI GGWCC 3 cut(s) 341, 711, 1084
SmaI CCCGGG 1 cut(s) 1420
SmiMI CAYNNNNRTG 3 cut(s) 20, 242, 435
SpeI ACTAGT 1 cut(s) 277
SphI GCATGC 2 cut(s) 54, 617
SspMI CTAG 5 cut(s) 258, 278, 986, 1364, 1565
StyD4I CCNGG 2 cut(s) 1417, 1418
StyI CCWWGG 1 cut(s) 228
TaaI ACNGT 3 cut(s) 171, 955, 1390
TaiI ACGT 3 cut(s) 138, 786, 1661
TaqI TCGA 6 cut(s) 294, 376, 585, 871, 1343, 1544
TatI WGTACW 2 cut(s) 922, 963
TauI GCSGC 4 cut(s) 47, 833, 880, 1739
TfiI GAWTC 2 cut(s) 196, 500
Tru1I TTAA 8 cut(s) 420, 452, 594, 866, 1428, 1527, 1535, 1795
Tru9I TTAA 8 cut(s) 420, 452, 594, 866, 1428, 1527, 1535, 1795
TscAI CASTG 3 cut(s) 16, 1326, 1479
TseFI GTSAC 5 cut(s) 233, 1148, 1244, 1390, 1551
Tsp45I GTSAC 5 cut(s) 233, 1148, 1244, 1390, 1551
TspDTI ATGAA 8 cut(s) 54, 513, 714, 812, 1082, 1240, 1268, 1582
TspGWI ACGGA 1 cut(s) 195
TspMI CCCGGG 1 cut(s) 1418
TspRI CASTG 3 cut(s) 16, 1326, 1479
Tth111I GACNNNGTC 1 cut(s) 1549
Van91I CCANNNNNTGG 1 cut(s) 542
VpaK11BI GGWCC 3 cut(s) 341, 711, 1084
XagI CCTNNNNNAGG 1 cut(s) 1174
XapI RAATTY 2 cut(s) 182, 1791
XceI RCATGY 4 cut(s) 54, 413, 617, 929
XcmI CCANNNNNNNNNTGG 1 cut(s) 1612
XmaI CCCGGG 1 cut(s) 1418
XmiI GTMKAC 1 cut(s) 1544
XspI CTAG 5 cut(s) 258, 278, 986, 1364, 1565
Zsp2I ATGCAT 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.