Rh5CG209400

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000319
Physical Location & Seq
Forward (+)
21137395 .. 21152517
15123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG209400.1

Sequence Viewer

Length: 2049 bp
ATGGATCATTCTATGTGCTATTTCTCTCGATTGAAAGAGAGAGAGTGCCGGATGGATCCTTCTATGTATAGGGCGGCAACTTGTGGTGATGTTGGTTTCTTGCAAAGAATTAGAGATGGTGATGTATCAACTGATCTTCTCAGTCAAAAAACCCCAAAGGGCAACAACATTCTTCACCTTGCAGCTGAATTCAAGCAGATCAATTTCTTCAAAGGCGTCCCTTCCTTTGAGAAAGGCTCTCCGCTGCTTTGGAACATCAACAAGATGGGTGATACCCCCTTGCACATTGCTGCAAGAGTAGGATGCGTTGAATTGGTGGACTTCCTTATTGATCGTGCAAAAATGCTACATGTTCAGAGAGTTGGCGATCAGGAAAGGGGAACAACATATGCTGAATCTTATAAAAAGTTACTGCGGAAGACCAGCTTGGAAAAGCATACGCCATTGCATGTTGCTGCCCGATATGGTCATCGTCAAGTGGTGATTTTGTTGATAAAAGCGGATCCTGAATTGTGTTGTTCTACTAATAGCAAAAAGGAGTCGCCATTGTTCTTGGCGATCTGCAAGGGTTTTTCTAACATTGCTGGTGACATTTTGGAGGAGCCTTCAATAAGACCTTCTTTCCAAGGAATCAATGGTGTTACAGCCTTACATGCAGCCGTAACTCATACATACCAAGGCTCTGAAGAGATTGTGAGGATCATGGTGTCCAAATGTCCAGATATGATCCAAAAAGCTGATGAACTTGGATGGACACCCTTACACTACGCAGCATTTAGAGGGAATGATAAAGCCGTCATATTGTTGATGGAATCAGAGGAGTCTAATACTTCCTACATCTCGGACAATTGTGGAATGACAGCTCTTCATGTCGCAGCTTATAAAGGCCACATCGAAGTAATGAAGAAACTGATTCAATATCAGCCTGATGCTTGTGAGTGCCTCAATGCCAAAGACCAAACGATTCTTCATGTCGCAGTTTTAGGTGCACAAAGTGATGTTGTGAAGTACATACTGGAGCTACCCGAGCTTCCGAGACTTATAGATCAAGCAGATAAAGAAGGATATACCCCTTTGCATCTAGCTGTCATGGGTCAAAAGCATGAAATTACAAGAATGCTGAAACGGGGCTGTGGAGTCGACAATACTTCTCTTCATAAGGGATTCTCTTTTGACACTTTTCTTGGTGAAGATACCAAAATACAGACAGCTTCAGCTCTGTGCAACCGGAAAAGGGAAGATCCAAACTTGTCACCCAATAACAAAGCCGAACAAGATGGAGAAGAAGGAATCTCAGTCAGAGTGGGAGAAGAGGGAAGCTCGGTCATACTGGGAAAAGGAAGCTCGGTCATACTGGGACGATACAAACTAGTTTTGGAGGAGAATATGGCTAACAAAGTGAACGAGCAGGAAATGAGTACTGAGAGTAGTCATCCGGGGCGCTCCTTTGGGGTGCCATCATTCCAAGAACAAATCAGTCGTGATTTCAAGAAATTTGAGTGGCATCCGGATGGCAAACCAGAAAATGCGAAATCTGATGTTCTACTGATAGCGACAATTATAGCAACAGTTACATTCGCGGCCGGTCTCACCCCGCCCGGAGGATATGGAGACGACGGAAAGATAATTTTACAAGACGATACAAATTTCAAATGTTTTTATATATTTAACGGGACCTCGTTCTTTCTCTCAAGCCTGGTTCTTATCCGAGAATCTGGGCCATGTTCATGTTTGGGCCCGAGACTCTCCAAAGTACTTGGTCCACTATTGTTCGCTCCCCTATCTGAAACCATCATTACGGCTTCCCTTTGCGGAATGCTTTTAGCATTTGGGCAGGGCACATCAGCAGGGATAAACAAATCAAACGCCTCAATCAAATCGCTCTGGCCTGGTCCTCTCACACTAGCAGCTGGAACAGCTTTAACGATGTTTGGTTTGGGCCCAGGTTTATTTCAAGCCTTCTCGAAGACCAGGGATGCACTTCGTGAAAAAAGATCGGACTCCGGAGGCGCGAGATTCCGTGGTATATTCTCTTTTTGGTCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

682

Amino Acids

74.96

Weight (kDa)

7.53

Isoelectric Point (pI)

37.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 25 - 112 1.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 141 - 196 9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 211 - 273 1.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 281 - 340 2.8e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 289 - 338 1.2e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 314 - 380 1.6e-07 Ankyrin repeats (3 copies)
PGG PF13962 508 - 614 2e-17 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 402, 882
AccB1I GGYRCC 1 cut(s) 1453
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 2 cut(s) 1580, 2012
AccIII TCCGGA 2 cut(s) 1507, 2003
AciI CCGC 7 cut(s) 74, 242, 415, 500, 1580, 1595, 1812
AclWI GGATC 8 cut(s) 12, 50, 63, 497, 510, 707, 721, 1235
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 3 cut(s) 188, 1493, 1645
AcuI CTGAAG 2 cut(s) 705, 1197
AcyI GRCGYC 1 cut(s) 216
AdeI CACNNNGTG 2 cut(s) 995, 1985
AfaI GTAC 3 cut(s) 1010, 1420, 1755
AfiI CCNNNNNNNGG 2 cut(s) 1234, 1601
AflIII ACRYGT 1 cut(s) 349
AgsI TTSAA 9 cut(s) 34, 193, 211, 311, 609, 917, 1489, 1651, 1955
AhlI ACTAGT 1 cut(s) 1369
AjnI CCWGG 4 cut(s) 1695, 1888, 1942, 1970
AjuI GAANNNNNNNTTGG 4 cut(s) 410, 442, 951, 983
Alw21I GWGCWC 1 cut(s) 991
Alw26I GTCTC 4 cut(s) 1030, 1592, 1605, 1735
Alw44I GTGCAC 1 cut(s) 987
AlwI GGATC 8 cut(s) 12, 50, 63, 497, 510, 707, 721, 1235
Ama87I CYCGRG 2 cut(s) 1025, 1738
Aor13HI TCCGGA 2 cut(s) 1507, 2003
AoxI GGCC 6 cut(s) 886, 1581, 1718, 1735, 1886, 1939
ApaI GGGCCC 2 cut(s) 1739, 1943
ApaLI GTGCAC 1 cut(s) 987
ApeKI GCWGC 8 cut(s) 182, 244, 290, 455, 656, 770, 875, 1907
ApoI RAATTY 3 cut(s) 188, 1493, 1645
AspLEI GCGC 2 cut(s) 1443, 2012
AspS9I GGNCC 8 cut(s) 1674, 1718, 1735, 1736, 1760, 1892, 1939, 1940
AsuC2I CCSGG 2 cut(s) 1437, 1599
AsuHPI GGTGA 9 cut(s) 98, 131, 167, 281, 493, 599, 1199, 1245, 1582
AvaI CYCGRG 2 cut(s) 1025, 1738
AvaII GGWCC 3 cut(s) 1674, 1760, 1892
BaeGI GKGCMC 4 cut(s) 991, 1739, 1841, 1943
BamHI GGATCC 2 cut(s) 55, 502
BanI GGYRCC 1 cut(s) 1453
BanII GRGCYC 2 cut(s) 1739, 1943
BbsI GAAGAC 2 cut(s) 425, 1973
Bbv12I GWGCWC 1 cut(s) 991
BbvI GCAGC 8 cut(s) 194, 231, 277, 442, 668, 782, 887, 1919
BccI CCATC 9 cut(s) 46, 110, 259, 744, 802, 1271, 1465, 1505, 1799
BceAI ACGGC 3 cut(s) 644, 779, 1815
BciT130I CCWGG 4 cut(s) 1697, 1890, 1944, 1972
BcnI CCSGG 2 cut(s) 1437, 1599
BcoDI GTCTC 4 cut(s) 1030, 1592, 1605, 1735
BcuI ACTAGT 1 cut(s) 1369
BfaI CTAG 3 cut(s) 1082, 1370, 1904
BfoI RGCGCY 1 cut(s) 1444
BmcAI AGTACT 2 cut(s) 1420, 1755
Bme1390I CCNGG 6 cut(s) 1437, 1599, 1697, 1890, 1944, 1972
Bme18I GGWCC 3 cut(s) 1674, 1760, 1892
BmeT110I CYCGRG 2 cut(s) 1025, 1738
BmgT120I GGNCC 8 cut(s) 1674, 1718, 1735, 1736, 1760, 1892, 1939, 1940
BmiI GGNNCC 7 cut(s) 57, 504, 603, 1455, 1675, 1737, 1941
BmrFI CCNGG 6 cut(s) 1437, 1599, 1697, 1890, 1944, 1972
BmrI ACTGGG 2 cut(s) 1340, 1364
BmsI GCATC 5 cut(s) 293, 919, 1087, 1513, 1966
BmuI ACTGGG 2 cut(s) 1340, 1364
BpiI GAAGAC 2 cut(s) 425, 1973
BplI GAGNNNNNCTC 4 cut(s) 221, 253, 1304, 1336
BpmI CTGGAG 1 cut(s) 1037
BpuEI CTTGAG 1 cut(s) 1675
BpuMI CCSGG 2 cut(s) 1437, 1599
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 1592
BsaJI CCNNGG 6 cut(s) 625, 676, 1436, 1942, 1971, 2020
BsaWI WCCGGW 3 cut(s) 1227, 1507, 2003
Bsc4I CCNNNNNNNGG 2 cut(s) 1234, 1601
Bse118I RCCGGY 1 cut(s) 1583
Bse1I ACTGG 3 cut(s) 1020, 1335, 1359
Bse3DI GCAATG 3 cut(s) 285, 443, 579
BseAI TCCGGA 2 cut(s) 1507, 2003
BseBI CCWGG 4 cut(s) 1697, 1890, 1944, 1972
BseDI CCNNGG 6 cut(s) 625, 676, 1436, 1942, 1971, 2020
BseGI GGATG 7 cut(s) 57, 308, 755, 1432, 1504, 1516, 1981
BseLI CCNNNNNNNGG 2 cut(s) 1234, 1601
BseMI GCAATG 3 cut(s) 285, 443, 579
BseMII CTCAG 3 cut(s) 154, 1308, 1413
BseNI ACTGG 3 cut(s) 1020, 1335, 1359
BseRI GAGGAG 3 cut(s) 614, 833, 1394
BseSI GKGCMC 4 cut(s) 991, 1739, 1841, 1943
BseX3I CGGCCG 1 cut(s) 1581
BseXI GCAGC 8 cut(s) 194, 231, 277, 442, 668, 782, 887, 1919
Bsh1236I CGCG 2 cut(s) 1580, 2012
Bsh1285I CGRYCG 1 cut(s) 1584
BshFI GGCC 6 cut(s) 888, 1583, 1720, 1737, 1888, 1941
BshNI GGYRCC 1 cut(s) 1453
BsiEI CGRYCG 1 cut(s) 1584
BsiHKAI GWGCWC 1 cut(s) 991
BsiHKCI CYCGRG 2 cut(s) 1025, 1738
BsiSI CCGG 7 cut(s) 49, 1228, 1436, 1508, 1584, 1599, 2004
BslFI GGGAC 3 cut(s) 203, 1371, 1687
BslI CCNNNNNNNGG 2 cut(s) 1234, 1601
BsmAI GTCTC 4 cut(s) 1030, 1592, 1605, 1735
BsmBI CGTCTC 1 cut(s) 1605
BsmFI GGGAC 3 cut(s) 203, 1371, 1687
BsmI GAATGC 2 cut(s) 1122, 1821
BsnI GGCC 6 cut(s) 888, 1583, 1720, 1737, 1888, 1941
Bso31I GGTCTC 1 cut(s) 1592
BsoBI CYCGRG 2 cut(s) 1025, 1738
Bsp120I GGGCCC 2 cut(s) 1735, 1939
Bsp1286I GDGCHC 4 cut(s) 991, 1739, 1841, 1943
Bsp13I TCCGGA 2 cut(s) 1507, 2003
BspACI CCGC 7 cut(s) 74, 242, 415, 500, 1580, 1595, 1812
BspANI GGCC 6 cut(s) 888, 1583, 1720, 1737, 1888, 1941
BspCNI CTCAG 3 cut(s) 153, 1307, 1414
BspEI TCCGGA 2 cut(s) 1507, 2003
BspFNI CGCG 2 cut(s) 1580, 2012
BspLI GGNNCC 7 cut(s) 57, 504, 603, 1455, 1675, 1737, 1941
BspPI GGATC 8 cut(s) 12, 50, 63, 497, 510, 707, 721, 1235
BspQI GCTCTTC 1 cut(s) 870
BspT107I GGYRCC 1 cut(s) 1453
BspTNI GGTCTC 1 cut(s) 1592
BsrDI GCAATG 3 cut(s) 285, 443, 579
BsrFI RCCGGY 1 cut(s) 1583
BsrI ACTGG 3 cut(s) 1020, 1335, 1359
BssAI RCCGGY 1 cut(s) 1583
BssECI CCNNGG 6 cut(s) 625, 676, 1436, 1942, 1971, 2020
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 625, 676
Bst2UI CCWGG 4 cut(s) 1697, 1890, 1944, 1972
Bst4CI ACNGT 1 cut(s) 1570
Bst6I CTCTTC 4 cut(s) 681, 870, 1158, 1305
BstACI GRCGYC 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 140, 1294, 1422
BstDSI CCRYGG 1 cut(s) 2020
BstF5I GGATG 7 cut(s) 57, 308, 755, 1432, 1504, 1516, 1981
BstFNI CGCG 2 cut(s) 1580, 2012
BstH2I RGCGCY 1 cut(s) 1444
BstHHI GCGC 2 cut(s) 1443, 2012
BstMAI GTCTC 4 cut(s) 1030, 1592, 1605, 1735
BstMCI CGRYCG 1 cut(s) 1584
BstMWI GCNNNNNNNGC 3 cut(s) 653, 1027, 1916
BstNI CCWGG 4 cut(s) 1697, 1890, 1944, 1972
BstNSI RCATGY 3 cut(s) 353, 452, 656
BstSCI CCNGG 6 cut(s) 1435, 1597, 1695, 1888, 1942, 1970
BstSLI GKGCMC 4 cut(s) 991, 1739, 1841, 1943
BstUI CGCG 2 cut(s) 1580, 2012
BstV1I GCAGC 8 cut(s) 194, 231, 277, 442, 668, 782, 887, 1919
BstV2I GAAGAC 2 cut(s) 425, 1973
BstX2I RGATCY 3 cut(s) 55, 502, 1240
BstYI RGATCY 3 cut(s) 55, 502, 1240
BstZI CGGCCG 1 cut(s) 1581
BsuRI GGCC 6 cut(s) 888, 1583, 1720, 1737, 1888, 1941
BtgI CCRYGG 1 cut(s) 2020
BtsCI GGATG 7 cut(s) 57, 308, 755, 1432, 1504, 1516, 1981
CfoI GCGC 2 cut(s) 1443, 2012
Cfr10I RCCGGY 1 cut(s) 1583
Cfr13I GGNCC 8 cut(s) 1674, 1718, 1735, 1736, 1760, 1892, 1939, 1940
CseI GACGC 1 cut(s) 205
Csp6I GTAC 3 cut(s) 1009, 1419, 1754
CviQI GTAC 3 cut(s) 1009, 1419, 1754
DdeI CTNAG 3 cut(s) 140, 1294, 1422
DraIII CACNNNGTG 2 cut(s) 995, 1985
EaeI YGGCCR 1 cut(s) 1581
EagI CGGCCG 1 cut(s) 1581
Eam1104I CTCTTC 4 cut(s) 681, 870, 1158, 1305
EarI CTCTTC 4 cut(s) 681, 870, 1158, 1305
EclXI CGGCCG 1 cut(s) 1581
Eco130I CCWWGG 2 cut(s) 625, 676
Eco24I GRGCYC 2 cut(s) 1739, 1943
Eco31I GGTCTC 1 cut(s) 1592
Eco47I GGWCC 3 cut(s) 1674, 1760, 1892
Eco52I CGGCCG 1 cut(s) 1581
Eco57I CTGAAG 2 cut(s) 705, 1197
Eco88I CYCGRG 2 cut(s) 1025, 1738
EcoO109I RGGNCCY 1 cut(s) 1674
EcoRI GAATTC 1 cut(s) 188
EcoRII CCWGG 4 cut(s) 1695, 1888, 1942, 1970
EcoT14I CCWWGG 2 cut(s) 625, 676
EcoT38I GRGCYC 2 cut(s) 1739, 1943
ErhI CCWWGG 2 cut(s) 625, 676
Esp3I CGTCTC 1 cut(s) 1605
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 604, 636
FaqI GGGAC 3 cut(s) 203, 1371, 1687
FauI CCCGC 1 cut(s) 1602
FauNDI CATATG 1 cut(s) 388
FblI GTMKAC 1 cut(s) 1140
FokI GGATG 7 cut(s) 64, 315, 762, 1419, 1491, 1523, 1988
FriOI GRGCYC 2 cut(s) 1739, 1943
FspBI CTAG 3 cut(s) 1082, 1370, 1904
GlaI GCGC 2 cut(s) 1442, 2011
GsuI CTGGAG 1 cut(s) 1037
HaeII RGCGCY 1 cut(s) 1444
HaeIII GGCC 6 cut(s) 888, 1583, 1720, 1737, 1888, 1941
HapII CCGG 7 cut(s) 49, 1228, 1436, 1508, 1584, 1599, 2004
HgaI GACGC 1 cut(s) 205
HhaI GCGC 2 cut(s) 1443, 2012
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 2 cut(s) 1441, 2010
HinP1I GCGC 2 cut(s) 1441, 2010
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HpaII CCGG 7 cut(s) 49, 1228, 1436, 1508, 1584, 1599, 2004
HphI GGTGA 9 cut(s) 98, 131, 167, 281, 493, 599, 1199, 1245, 1582
Hpy166II GTNNAC 5 cut(s) 319, 989, 1141, 1402, 1763
Hpy8I GTNNAC 5 cut(s) 319, 989, 1141, 1402, 1763
Hpy99I CGWCG 1 cut(s) 1619
HpyAV CCTTC 7 cut(s) 69, 231, 615, 627, 1055, 1280, 1969
HpyCH4III ACNGT 1 cut(s) 1570
HpyF10VI GCNNNNNNNGC 3 cut(s) 653, 1027, 1916
HpyF3I CTNAG 3 cut(s) 140, 1294, 1422
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 2 cut(s) 1441, 2010
Kpn2I TCCGGA 2 cut(s) 1507, 2003
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 4 cut(s) 601, 1018, 1448, 1780
Lsp1109I GCAGC 8 cut(s) 194, 231, 277, 442, 668, 782, 887, 1919
LweI GCATC 5 cut(s) 293, 919, 1087, 1513, 1966
MaeI CTAG 3 cut(s) 1082, 1370, 1904
MaeIII GTNAC 6 cut(s) 408, 587, 640, 661, 1251, 1570
MfeI CAATTG 1 cut(s) 847
MflI RGATCY 3 cut(s) 55, 502, 1240
MhlI GDGCHC 4 cut(s) 991, 1739, 1841, 1943
MlyI GAGTC 5 cut(s) 548, 830, 1146, 1737, 1994
MroI TCCGGA 2 cut(s) 1507, 2003
MseI TTAA 2 cut(s) 1668, 1922
MslI CAYNNNNRTG 2 cut(s) 1509, 1726
MspA1I CMGCKG 3 cut(s) 185, 244, 1910
MspI CCGG 7 cut(s) 49, 1228, 1436, 1508, 1584, 1599, 2004
MspR9I CCNGG 6 cut(s) 1437, 1599, 1697, 1890, 1944, 1972
MunI CAATTG 1 cut(s) 847
Mva1269I GAATGC 2 cut(s) 1122, 1821
MvaI CCWGG 4 cut(s) 1697, 1890, 1944, 1972
MvnI CGCG 2 cut(s) 1580, 2012
MwoI GCNNNNNNNGC 3 cut(s) 653, 1027, 1916
NciI CCSGG 2 cut(s) 1437, 1599
NdeI CATATG 1 cut(s) 388
NlaIV GGNNCC 7 cut(s) 57, 504, 603, 1455, 1675, 1737, 1941
NmuCI GTSAC 2 cut(s) 587, 1251
NspI RCATGY 3 cut(s) 353, 452, 656
PciI ACATGT 1 cut(s) 349
PciSI GCTCTTC 1 cut(s) 870
PctI GAATGC 2 cut(s) 1122, 1821
PfeI GAWTC 9 cut(s) 395, 630, 812, 913, 964, 1164, 1290, 1712, 2016
PleI GAGTC 5 cut(s) 547, 829, 1145, 1737, 1994
PpsI GAGTC 5 cut(s) 547, 829, 1145, 1737, 1994
PpuMI RGGWCCY 1 cut(s) 1674
PscI ACATGT 1 cut(s) 349
PsiI TTATAA 2 cut(s) 402, 882
Psp5II RGGWCCY 1 cut(s) 1674
Psp6I CCWGG 4 cut(s) 1695, 1888, 1942, 1970
PspGI CCWGG 4 cut(s) 1695, 1888, 1942, 1970
PspN4I GGNNCC 7 cut(s) 57, 504, 603, 1455, 1675, 1737, 1941
PspOMI GGGCCC 2 cut(s) 1735, 1939
PspPI GGNCC 8 cut(s) 1674, 1718, 1735, 1736, 1760, 1892, 1939, 1940
PspPPI RGGWCCY 1 cut(s) 1674
PsuI RGATCY 3 cut(s) 55, 502, 1240
PvuII CAGCTG 2 cut(s) 185, 1910
RsaI GTAC 3 cut(s) 1010, 1420, 1755
RsaNI GTAC 3 cut(s) 1009, 1419, 1754
RseI CAYNNNNRTG 2 cut(s) 1509, 1726
SalI GTCGAC 1 cut(s) 1139
SapI GCTCTTC 1 cut(s) 870
SaqAI TTAA 2 cut(s) 1668, 1922
Sau96I GGNCC 8 cut(s) 1674, 1718, 1735, 1736, 1760, 1892, 1939, 1940
ScaI AGTACT 2 cut(s) 1420, 1755
SchI GAGTC 5 cut(s) 548, 830, 1146, 1737, 1994
ScrFI CCNGG 6 cut(s) 1437, 1599, 1697, 1890, 1944, 1972
SduI GDGCHC 4 cut(s) 991, 1739, 1841, 1943
SfaNI GCATC 5 cut(s) 293, 919, 1087, 1513, 1966
SinI GGWCC 3 cut(s) 1674, 1760, 1892
SmiMI CAYNNNNRTG 2 cut(s) 1509, 1726
SmlI CTYRAG 1 cut(s) 1690
SmoI CTYRAG 1 cut(s) 1690
SpeI ACTAGT 1 cut(s) 1369
SsiI CCGC 7 cut(s) 74, 242, 415, 500, 1580, 1595, 1812
SspMI CTAG 3 cut(s) 1082, 1370, 1904
StyD4I CCNGG 6 cut(s) 1435, 1597, 1695, 1888, 1942, 1970
StyI CCWWGG 2 cut(s) 625, 676
TaaI ACNGT 1 cut(s) 1570
TaqI TCGA 4 cut(s) 28, 894, 1140, 1964
TaqII GACCGA 2 cut(s) 1312, 1336
TatI WGTACW 3 cut(s) 1008, 1418, 1753
TauI GCSGC 2 cut(s) 77, 1583
TfiI GAWTC 9 cut(s) 395, 630, 812, 913, 964, 1164, 1290, 1712, 2016
Tru1I TTAA 2 cut(s) 1668, 1922
Tru9I TTAA 2 cut(s) 1668, 1922
TseFI GTSAC 2 cut(s) 587, 1251
TseI GCWGC 8 cut(s) 182, 244, 290, 455, 656, 770, 875, 1907
Tsp45I GTSAC 2 cut(s) 587, 1251
TspDTI ATGAA 7 cut(s) 756, 857, 917, 959, 1119, 1145, 1716
TspGWI ACGGA 2 cut(s) 1632, 2009
VneI GTGCAC 1 cut(s) 987
VpaK11BI GGWCC 3 cut(s) 1674, 1760, 1892
XapI RAATTY 3 cut(s) 188, 1493, 1645
XceI RCATGY 3 cut(s) 353, 452, 656
XcmI CCANNNNNNNNNTGG 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 3 cut(s) 1082, 1370, 1904
ZrmI AGTACT 2 cut(s) 1420, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.