Rroxscaffold_1G00052360

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000319
Physical Location & Seq
Reverse (-)
73115241 .. 73123470
8230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00052360.1

Sequence Viewer

Length: 1683 bp
ATGGATCATTCTATGTGCTATTTCTCTCGATTGAAAGAGAGAGAGTGCCGGATGGATCCTTCTATGTATAGGGCGGCAACTTGTGGTGATGTTGGTTTCTTGCAAAGAATTAGAGATGGTGATGTGTCAACTGATCTTCTCAGTCAAAAAACCCCAAAGGGCAACAACATTCTTCACCTTGCAGCTGAATTCAAGCAGATCAATTTCTTCAAAGGCGTCCCTTCCTTTGAGAAAGGCTCTCCGCTGCTTTGGAACATCAACAAGATGGGTGATACCCCCTTGCACATTGCTGCAAGAGTAGGATGCGTTGAATTGGTGGACTTCCTTATTGATCGTGCAAAAATGCTACATGTTCAGAGAGTTGGCGATCAGGAAAGGGGAACAACATATGCTGAATCTTATAAAAAGTTACTGCGGAAGACCAACTTGGAAAAGCATACGGCATTGCATGTTGCTGCCCGATATGGTCATCGTCAAGTGGTGATTTTGTTGATAAAAGCGGATCCTGAATTGTGTTGTTCTACTAATAGCAAAAAGGAGTCGCCATTGTTCTTGGCGATCTGCAAGGGTTTTTCTGACATTGCTGGTGACATTTTGAAGGAGCCTTCAATAAGACCTTCTTTCCAAGGAATCAATGGTGTTACAGCCTTACATGCAGCCGTAACTCATACATACCAAGGCTCTGAAGAGATTGTGAAGATCATGGTGTTCAAATATCCTGATATGATCAGAAAAGCTGATGAACTTGGGTGGACACCCTTACACTACGCAGCATTTAGAGGGAACGATAAAGCCGTTACATGGTTGATGGAATCAGACAAGTCTAGTACTTCCTATATCTCGGACAAATGTGGAATGACAGCTCTTCATGTCGCAGCATATAAAGGCCACATCGAAGTAATGAAGAAACTGATTCAATATCAGCCTGATACTTGTGAGTGCCTCAATGCCAAAGACCAAACGATTCTTCATGTCGCAGTTTTAGGTGCACAAAGTGATGTTGTGAAGTACATACTGGAGCTACCCGAGCTTCCGAGACTTATAGATCAAGCAGATAAAGAAGGATATACCCCTTTGCATCTAGCTGTCATGGGTCAAAAGCATGAAATTACAAGAATGCTGAAACGGGACTGTGGAGTCGACAATACTTCTCTTCATAAGGGATTCTCTTTTGACAATTTTCTTGGTGAAGATACCAAAATACAGGTTTTGGAGGAGAATATGGCTAACAAAGTGAACGAGCCGGAAATGTGTACTGAGATTAGTCATCCGGGGCGCTCCTTTGGGGTACCATCATTCCAAGAACAAATCAGTCGTGATTTCAAGAAATTTGAGTCGCATCCGGATGACAAAGACTCCGGCACATCCGCAGTTGCTGGCAAACCAGAAAATGCGAAATCTGATGTTCTACTGATAGCGACAATTATAGCAACAGTTACATTCGCGGCCGGTCTCACCCCGCCCGGAGGATATGGAGACGACGGAAAGATAATTTTACAAGACAATACATATTTCAAATGGTTTTATACATTGAACTGGATCTCGTTCTTGCTCTCAAGCCTCGTTCTTATCCGAGAATCTGGTCCATGTTTGGGCCCGAGACTCTCCAAAGTACTTGGTCCACTATTGCTTCCCTTTACGGAATGCTTTTTGCATTTTGGCAGGGCACAACAGCAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

560

Amino Acids

62.57

Weight (kDa)

7.02

Isoelectric Point (pI)

33.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 25 - 112 1.4e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 136 - 197 3.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 211 - 273 4.1e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 261 - 305 1.1e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 281 - 340 2.1e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 289 - 338 5.6e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 315 - 382 1.1e-07 Ankyrin repeats (3 copies)
PGG PF13962 463 - 524 4.9e-16 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 402
AasI GACNNNNNNGTC 1 cut(s) 1136
Acc65I GGTACC 1 cut(s) 1288
AccB1I GGYRCC 1 cut(s) 1288
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 1 cut(s) 1445
AccIII TCCGGA 1 cut(s) 1342
AciI CCGC 7 cut(s) 74, 242, 415, 500, 1368, 1445, 1460
AclWI GGATC 6 cut(s) 12, 50, 63, 497, 510, 1547
AcoI YGGCCR 1 cut(s) 1446
AcsI RAATTY 2 cut(s) 188, 1328
AcuI CTGAAG 1 cut(s) 705
AcyI GRCGYC 1 cut(s) 216
AdeI CACNNNGTG 1 cut(s) 995
AfaI GTAC 5 cut(s) 829, 1010, 1255, 1290, 1614
AfiI CCNNNNNNNGG 3 cut(s) 801, 1466, 1592
AflIII ACRYGT 1 cut(s) 349
AjuI GAANNNNNNNTTGG 4 cut(s) 410, 442, 951, 983
AluBI AGCT 6 cut(s) 185, 737, 863, 1021, 1030, 1085
AluI AGCT 6 cut(s) 185, 737, 863, 1021, 1030, 1085
Alw21I GWGCWC 1 cut(s) 991
Alw26I GTCTC 4 cut(s) 1030, 1457, 1470, 1594
Alw44I GTGCAC 1 cut(s) 987
AlwI GGATC 6 cut(s) 12, 50, 63, 497, 510, 1547
AlwNI CAGNNNCTG 1 cut(s) 1376
Ama87I CYCGRG 2 cut(s) 1025, 1597
Aor13HI TCCGGA 1 cut(s) 1342
AoxI GGCC 3 cut(s) 886, 1446, 1594
ApaI GGGCCC 1 cut(s) 1598
ApaLI GTGCAC 1 cut(s) 987
ApeKI GCWGC 7 cut(s) 182, 244, 290, 455, 656, 770, 875
ApoI RAATTY 2 cut(s) 188, 1328
Asp718I GGTACC 1 cut(s) 1288
AspLEI GCGC 1 cut(s) 1278
AspS9I GGNCC 4 cut(s) 1583, 1594, 1595, 1619
AsuC2I CCSGG 2 cut(s) 1272, 1464
AsuHPI GGTGA 8 cut(s) 98, 131, 167, 281, 493, 599, 1199, 1447
AvaI CYCGRG 2 cut(s) 1025, 1597
AvaII GGWCC 2 cut(s) 1583, 1619
BaeGI GKGCMC 3 cut(s) 991, 1598, 1669
BamHI GGATCC 2 cut(s) 55, 502
BanI GGYRCC 1 cut(s) 1288
BanII GRGCYC 1 cut(s) 1598
BbsI GAAGAC 1 cut(s) 425
Bbv12I GWGCWC 1 cut(s) 991
BbvI GCAGC 7 cut(s) 194, 231, 277, 442, 668, 782, 887
BccI CCATC 5 cut(s) 46, 110, 259, 802, 1300
BceAI ACGGC 3 cut(s) 456, 644, 779
BclI TGATCA 1 cut(s) 726
BcnI CCSGG 2 cut(s) 1272, 1464
BcoDI GTCTC 4 cut(s) 1030, 1457, 1470, 1594
BfaI CTAG 2 cut(s) 825, 1082
BfoI RGCGCY 1 cut(s) 1279
BisI GCNGC 9 cut(s) 75, 183, 245, 291, 456, 657, 771, 876, 1446
BlsI GCNGC 9 cut(s) 76, 184, 246, 292, 457, 658, 772, 877, 1447
BmcAI AGTACT 2 cut(s) 829, 1614
Bme1390I CCNGG 2 cut(s) 1272, 1464
Bme18I GGWCC 2 cut(s) 1583, 1619
BmeT110I CYCGRG 2 cut(s) 1025, 1597
BmgT120I GGNCC 4 cut(s) 1583, 1594, 1595, 1619
BmiI GGNNCC 5 cut(s) 57, 504, 603, 1290, 1596
BmrFI CCNGG 2 cut(s) 1272, 1464
BmsI GCATC 3 cut(s) 293, 1087, 1348
BpiI GAAGAC 1 cut(s) 425
BplI GAGNNNNNCTC 2 cut(s) 221, 253
BpmI CTGGAG 1 cut(s) 1037
BpuEI CTTGAG 1 cut(s) 1540
BpuMI CCSGG 2 cut(s) 1272, 1464
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 1457
BsaJI CCNNGG 3 cut(s) 625, 676, 1271
BsaWI WCCGGW 1 cut(s) 1342
BsaXI ACNNNNNCTCC 2 cut(s) 1340, 1370
Bsc4I CCNNNNNNNGG 3 cut(s) 801, 1466, 1592
Bse118I RCCGGY 1 cut(s) 1448
Bse1I ACTGG 2 cut(s) 1020, 1541
Bse3DI GCAATG 3 cut(s) 285, 443, 579
BseAI TCCGGA 1 cut(s) 1342
BseDI CCNNGG 3 cut(s) 625, 676, 1271
BseGI GGATG 6 cut(s) 57, 308, 1267, 1339, 1351, 1364
BseLI CCNNNNNNNGG 3 cut(s) 801, 1466, 1592
BseMI GCAATG 3 cut(s) 285, 443, 579
BseMII CTCAG 2 cut(s) 154, 1248
BseNI ACTGG 2 cut(s) 1020, 1541
BseRI GAGGAG 1 cut(s) 1229
BseSI GKGCMC 3 cut(s) 991, 1598, 1669
BseX3I CGGCCG 1 cut(s) 1446
BseXI GCAGC 7 cut(s) 194, 231, 277, 442, 668, 782, 887
Bsh1236I CGCG 1 cut(s) 1445
Bsh1285I CGRYCG 1 cut(s) 1449
BshFI GGCC 3 cut(s) 888, 1448, 1596
BshNI GGYRCC 1 cut(s) 1288
BsiEI CGRYCG 1 cut(s) 1449
BsiHKAI GWGCWC 1 cut(s) 991
BsiHKCI CYCGRG 2 cut(s) 1025, 1597
BsiSI CCGG 7 cut(s) 49, 1244, 1271, 1343, 1359, 1449, 1464
BslFI GGGAC 2 cut(s) 203, 1142
BslI CCNNNNNNNGG 3 cut(s) 801, 1466, 1592
BsmAI GTCTC 4 cut(s) 1030, 1457, 1470, 1594
BsmBI CGTCTC 1 cut(s) 1470
BsmFI GGGAC 2 cut(s) 203, 1142
BsmI GAATGC 2 cut(s) 1122, 1649
BsnI GGCC 3 cut(s) 888, 1448, 1596
Bso31I GGTCTC 1 cut(s) 1457
BsoBI CYCGRG 2 cut(s) 1025, 1597
Bsp120I GGGCCC 1 cut(s) 1594
Bsp1286I GDGCHC 3 cut(s) 991, 1598, 1669
Bsp13I TCCGGA 1 cut(s) 1342
BspACI CCGC 7 cut(s) 74, 242, 415, 500, 1368, 1445, 1460
BspANI GGCC 3 cut(s) 888, 1448, 1596
BspCNI CTCAG 2 cut(s) 153, 1249
BspEI TCCGGA 1 cut(s) 1342
BspFNI CGCG 1 cut(s) 1445
BspLI GGNNCC 5 cut(s) 57, 504, 603, 1290, 1596
BspPI GGATC 6 cut(s) 12, 50, 63, 497, 510, 1547
BspQI GCTCTTC 1 cut(s) 870
BspT107I GGYRCC 1 cut(s) 1288
BspTNI GGTCTC 1 cut(s) 1457
BsrDI GCAATG 3 cut(s) 285, 443, 579
BsrFI RCCGGY 1 cut(s) 1448
BsrI ACTGG 2 cut(s) 1020, 1541
BssAI RCCGGY 1 cut(s) 1448
BssECI CCNNGG 3 cut(s) 625, 676, 1271
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 625, 676
Bst4CI ACNGT 2 cut(s) 1133, 1435
Bst6I CTCTTC 3 cut(s) 681, 870, 1158
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 1 cut(s) 1378
BstDEI CTNAG 2 cut(s) 140, 1257
BstF5I GGATG 6 cut(s) 57, 308, 1267, 1339, 1351, 1364
BstFNI CGCG 1 cut(s) 1445
BstH2I RGCGCY 1 cut(s) 1279
BstHHI GCGC 1 cut(s) 1278
BstMAI GTCTC 4 cut(s) 1030, 1457, 1470, 1594
BstMCI CGRYCG 1 cut(s) 1449
BstMWI GCNNNNNNNGC 2 cut(s) 653, 1027
BstNSI RCATGY 3 cut(s) 353, 452, 656
BstSCI CCNGG 2 cut(s) 1270, 1462
BstSLI GKGCMC 3 cut(s) 991, 1598, 1669
BstUI CGCG 1 cut(s) 1445
BstV1I GCAGC 7 cut(s) 194, 231, 277, 442, 668, 782, 887
BstV2I GAAGAC 1 cut(s) 425
BstX2I RGATCY 3 cut(s) 55, 502, 1539
BstYI RGATCY 3 cut(s) 55, 502, 1539
BstZI CGGCCG 1 cut(s) 1446
BsuRI GGCC 3 cut(s) 888, 1448, 1596
BtsCI GGATG 6 cut(s) 57, 308, 1267, 1339, 1351, 1364
Cac8I GCNNGC 1 cut(s) 1378
CaiI CAGNNNCTG 1 cut(s) 1376
CfoI GCGC 1 cut(s) 1278
Cfr10I RCCGGY 1 cut(s) 1448
Cfr13I GGNCC 4 cut(s) 1583, 1594, 1595, 1619
CseI GACGC 1 cut(s) 205
Csp6I GTAC 5 cut(s) 828, 1009, 1254, 1289, 1613
CviQI GTAC 5 cut(s) 828, 1009, 1254, 1289, 1613
DdeI CTNAG 2 cut(s) 140, 1257
DraIII CACNNNGTG 1 cut(s) 995
DrdI GACNNNNNNGTC 1 cut(s) 1136
DseDI GACNNNNNNGTC 1 cut(s) 1136
EaeI YGGCCR 1 cut(s) 1446
EagI CGGCCG 1 cut(s) 1446
Eam1104I CTCTTC 3 cut(s) 681, 870, 1158
EarI CTCTTC 3 cut(s) 681, 870, 1158
EclXI CGGCCG 1 cut(s) 1446
Eco130I CCWWGG 2 cut(s) 625, 676
Eco24I GRGCYC 1 cut(s) 1598
Eco31I GGTCTC 1 cut(s) 1457
Eco47I GGWCC 2 cut(s) 1583, 1619
Eco52I CGGCCG 1 cut(s) 1446
Eco57I CTGAAG 1 cut(s) 705
Eco88I CYCGRG 2 cut(s) 1025, 1597
EcoRI GAATTC 1 cut(s) 188
EcoT14I CCWWGG 2 cut(s) 625, 676
EcoT38I GRGCYC 1 cut(s) 1598
ErhI CCWWGG 2 cut(s) 625, 676
Esp3I CGTCTC 1 cut(s) 1470
FalI AAGNNNNNCTT 4 cut(s) 410, 442, 604, 636
FaqI GGGAC 2 cut(s) 203, 1142
FauI CCCGC 1 cut(s) 1467
FauNDI CATATG 1 cut(s) 388
FbaI TGATCA 1 cut(s) 726
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 9 cut(s) 75, 183, 245, 291, 456, 657, 771, 876, 1446
FokI GGATG 6 cut(s) 64, 315, 1254, 1326, 1351, 1358
FriOI GRGCYC 1 cut(s) 1598
Fsp4HI GCNGC 9 cut(s) 75, 183, 245, 291, 456, 657, 771, 876, 1446
FspBI CTAG 2 cut(s) 825, 1082
GlaI GCGC 1 cut(s) 1277
GluI GCNGC 9 cut(s) 75, 183, 245, 291, 456, 657, 771, 876, 1446
GsuI CTGGAG 1 cut(s) 1037
HaeII RGCGCY 1 cut(s) 1279
HaeIII GGCC 3 cut(s) 888, 1448, 1596
HapII CCGG 7 cut(s) 49, 1244, 1271, 1343, 1359, 1449, 1464
HgaI GACGC 1 cut(s) 205
HhaI GCGC 1 cut(s) 1278
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 1 cut(s) 1276
HinP1I GCGC 1 cut(s) 1276
HincII GTYRAC 2 cut(s) 129, 1141
HindII GTYRAC 2 cut(s) 129, 1141
HpaII CCGG 7 cut(s) 49, 1244, 1271, 1343, 1359, 1449, 1464
HphI GGTGA 8 cut(s) 98, 131, 167, 281, 493, 599, 1199, 1447
Hpy166II GTNNAC 8 cut(s) 129, 319, 753, 989, 1141, 1237, 1254, 1622
Hpy188I TCNGA 9 cut(s) 357, 577, 685, 731, 817, 844, 1035, 1402, 1574
Hpy188III TCNNGA 7 cut(s) 27, 371, 506, 719, 1316, 1324, 1343
Hpy8I GTNNAC 8 cut(s) 129, 319, 753, 989, 1141, 1237, 1254, 1622
Hpy99I CGWCG 1 cut(s) 1484
HpyAV CCTTC 6 cut(s) 69, 231, 592, 615, 627, 1055
HpyCH4III ACNGT 2 cut(s) 1133, 1435
HpyF10VI GCNNNNNNNGC 2 cut(s) 653, 1027
HpyF3I CTNAG 2 cut(s) 140, 1257
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 1 cut(s) 1276
Kpn2I TCCGGA 1 cut(s) 1342
KpnI GGTACC 1 cut(s) 1292
Ksp22I TGATCA 1 cut(s) 726
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 3 cut(s) 601, 1018, 1283
Lsp1109I GCAGC 7 cut(s) 194, 231, 277, 442, 668, 782, 887
LweI GCATC 3 cut(s) 293, 1087, 1348
MaeI CTAG 2 cut(s) 825, 1082
MaeIII GTNAC 6 cut(s) 408, 587, 640, 661, 796, 1435
MflI RGATCY 3 cut(s) 55, 502, 1539
MhlI GDGCHC 3 cut(s) 991, 1598, 1669
MlyI GAGTC 5 cut(s) 548, 1146, 1343, 1349, 1596
MnlI CCTC 5 cut(s) 773, 953, 1207, 1460, 1571
MroI TCCGGA 1 cut(s) 1342
MslI CAYNNNNRTG 1 cut(s) 1344
MspA1I CMGCKG 2 cut(s) 185, 244
MspI CCGG 7 cut(s) 49, 1244, 1271, 1343, 1359, 1449, 1464
MspR9I CCNGG 2 cut(s) 1272, 1464
Mva1269I GAATGC 2 cut(s) 1122, 1649
MvnI CGCG 1 cut(s) 1445
MwoI GCNNNNNNNGC 2 cut(s) 653, 1027
NciI CCSGG 2 cut(s) 1272, 1464
NdeI CATATG 1 cut(s) 388
NlaIV GGNNCC 5 cut(s) 57, 504, 603, 1290, 1596
NmuCI GTSAC 1 cut(s) 587
NspI RCATGY 3 cut(s) 353, 452, 656
PciI ACATGT 1 cut(s) 349
PciSI GCTCTTC 1 cut(s) 870
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 2 cut(s) 1122, 1649
PfeI GAWTC 7 cut(s) 395, 630, 812, 913, 964, 1164, 1577
PkrI GCNGC 9 cut(s) 76, 184, 246, 292, 457, 658, 772, 877, 1447
PleI GAGTC 5 cut(s) 547, 1145, 1342, 1349, 1596
PpsI GAGTC 5 cut(s) 547, 1145, 1342, 1349, 1596
PscI ACATGT 1 cut(s) 349
PsiI TTATAA 1 cut(s) 402
PspN4I GGNNCC 5 cut(s) 57, 504, 603, 1290, 1596
PspOMI GGGCCC 1 cut(s) 1594
PspPI GGNCC 4 cut(s) 1583, 1594, 1595, 1619
PstNI CAGNNNCTG 1 cut(s) 1376
PsuI RGATCY 3 cut(s) 55, 502, 1539
PvuII CAGCTG 1 cut(s) 185
RsaI GTAC 5 cut(s) 829, 1010, 1255, 1290, 1614
RsaNI GTAC 5 cut(s) 828, 1009, 1254, 1289, 1613
RseI CAYNNNNRTG 1 cut(s) 1344
SalI GTCGAC 1 cut(s) 1139
SapI GCTCTTC 1 cut(s) 870
SatI GCNGC 9 cut(s) 75, 183, 245, 291, 456, 657, 771, 876, 1446
Sau96I GGNCC 4 cut(s) 1583, 1594, 1595, 1619
ScaI AGTACT 2 cut(s) 829, 1614
SchI GAGTC 5 cut(s) 548, 1146, 1343, 1349, 1596
ScrFI CCNGG 2 cut(s) 1272, 1464
SduI GDGCHC 3 cut(s) 991, 1598, 1669
SfaNI GCATC 3 cut(s) 293, 1087, 1348
SinI GGWCC 2 cut(s) 1583, 1619
SmiMI CAYNNNNRTG 1 cut(s) 1344
SmlI CTYRAG 1 cut(s) 1555
SmoI CTYRAG 1 cut(s) 1555
SsiI CCGC 7 cut(s) 74, 242, 415, 500, 1368, 1445, 1460
SspMI CTAG 2 cut(s) 825, 1082
StyD4I CCNGG 2 cut(s) 1270, 1462
StyI CCWWGG 2 cut(s) 625, 676
TaaI ACNGT 2 cut(s) 1133, 1435
TaqI TCGA 3 cut(s) 28, 894, 1140
TatI WGTACW 4 cut(s) 827, 1008, 1253, 1612
TauI GCSGC 2 cut(s) 77, 1448
TfiI GAWTC 7 cut(s) 395, 630, 812, 913, 964, 1164, 1577
TseFI GTSAC 1 cut(s) 587
TseI GCWGC 7 cut(s) 182, 244, 290, 455, 656, 770, 875
Tsp45I GTSAC 1 cut(s) 587
TspDTI ATGAA 6 cut(s) 756, 857, 917, 959, 1119, 1145
TspGWI ACGGA 2 cut(s) 1497, 1655
VneI GTGCAC 1 cut(s) 987
VpaK11BI GGWCC 2 cut(s) 1583, 1619
XapI RAATTY 2 cut(s) 188, 1328
XceI RCATGY 3 cut(s) 353, 452, 656
XcmI CCANNNNNNNNNTGG 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 2 cut(s) 825, 1082
ZrmI AGTACT 2 cut(s) 829, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.