RLG00000033002

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000319
Physical Location & Seq
Forward (+)
21968355 .. 21970516
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033002

Sequence Viewer

Length: 1803 bp
ATGGATCCTTACCTGTATAAGGCGGCGAAGGACGGAGATGTCAGCTTCTTGAGAAGAATCAGAGACGGTGACGTATTACTAAACCAGGATCTTCTCCTTCAGAAAACACCTAAAGACAACAACATTCTACACATCGCCGTTGAATTCAAACGCATTGAGTTTTTCAGCCAAGTCTCGAATCACTATTCTCCTTCTCTGTTTTGGGCGGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTAGGCTGTGATAAAATAGTCAAGTTCCTTATCGAGCAGGCGAAAGCGCTGCAGATAAGAGGAGCTGATGAGGAAAGCTGTCATCAAAAGCCGCTACTTCGGATGACGAATTTAAAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCTTGGAGTGGTGGTTCTGTTAATGAAAGCCGATCCTGAACTGTGTTGTTTGACTAACAGGGCAGATGAATCTGTTTTGTTCTTGGCTGCTAGGAAGGAGTCTGCAGAGATTGCTCTTTATCTGTTGAACGAGTCTCCGGTGTGTCCTTGTTTTCGAGGGACTAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCAAAGGCATTGTGAGGACAATGGTGTCCAAAAATCCTGAGATGATTAAAAACGTAGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAATCTTGAAGCGACTAGAGTGCTAATGCAATGCGATAGTTCTGCATCTTACATCTTAGACAACTCAGGGATGTCAGCTCTCCATGTAGCAGCCCATGCCGGCCACACCGATATAATGGAGGAGCTGCTGAATGAGCGGCCTGATATTTGTGATCTGCTGAATGACAAAGGCCAAACGGCTTTACATGCGGCAGTATTAGGAGCACGAGTTAATGTTGTGGAGTACATATTGAAGAACTCTAAGCTTACGGCGATTATAAACGAAGCAGATAAAGATGGAAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATAAAAGTTCTGTCCGGCGATCGGAAGGTGGACATGATTGCTATTAATAAGGCATTCGCGATGCCCACTGACATGTTTCTTGGTGACAATATTGGTGAACAGGAAACAATTCGCAATGCAATGGTTTTGCACAACCTGGGGTGCTCTGTTGGCGTGCCATTTTTCCAACAACAAATCAGCCGTGACTTCGACAAATTGGAACCACTAGAGAAGGGCACAGACAAGATCAGAGAAAACCAGCTGCAGGCTCCTCCGGCTCCTCCGGATGATCGTAATGCCTTAGAAAGAGATGACACCAAACTACTTGTTGCAACTCTCATTGCAACTGTCACGTTTGCAGCATCTTTCACCAGCGTGCCTGGAGGATTTAAAGACAACGGAATGCCTATTTTATATGAGGAGGCCGCTTTCAAAGTGTTTCAGTTTTTCAATGCAGCGTCCTTCTACATCTCAATTCTTGCAATCTATAATGAATCAATTCCGATAACTGTGTTATCCATCCATCTACCCACACCATCAAGTCTCATTCAGTATTCCATTGGAGGAATGGTGGTTGCATTTTTTTCGGGCACATTAGTAGTGCAGCCGAGACGTAGTCACAAAAATTTGTTTGAATTTATATTTGGTAGAAAGTCGATTGATATTGTGCTCACGGTAATGTGTGGCCTTTTTCTAATATTAGCTATCGTCCCTGCACTGAAGTTTCTGGAACAAATACGCAGGGGAAAGAGGATCCACTGGTTTCGAAACCATGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

601

Amino Acids

66.62

Weight (kDa)

7.63

Isoelectric Point (pI)

36.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 7 - 96 1.3e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 122 - 178 8.6e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 127 - 216 1.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 161 - 250 1.9e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 208 - 288 4.9e-13 Ankyrin repeats (3 copies)
Ank_2 PF12796 257 - 318 2.5e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 266 - 315 8.1e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 290 - 354 1.5e-10 Ankyrin repeats (3 copies)
PGG PF13962 443 - 540 8.8e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AasI GACNNNNNNGTC 2 cut(s) 38, 640
AccBSI CCGCTC 1 cut(s) 853
AccII CGCG 1 cut(s) 1100
AccIII TCCGGA 1 cut(s) 1303
AciI CCGC 9 cut(s) 23, 206, 243, 341, 394, 591, 853, 905, 1446
AclWI GGATC 5 cut(s) 12, 96, 431, 1768, 1781
AcoI YGGCCR 3 cut(s) 207, 240, 817
AcsI RAATTY 4 cut(s) 143, 358, 1645, 1655
AcuI CTGAAG 3 cut(s) 83, 1007, 1760
AcvI CACGTG 1 cut(s) 238
AfaI GTAC 2 cut(s) 398, 941
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 3 cut(s) 19, 1062, 1285
AflIII ACRYGT 1 cut(s) 1113
AgsI TTSAA 8 cut(s) 143, 148, 532, 725, 949, 1453, 1471, 1655
AjnI CCWGG 3 cut(s) 84, 1176, 1399
AjuI GAANNNNNNNTTGG 2 cut(s) 1647, 1679
AleI CACNNNNGTG 1 cut(s) 1394
AloI GAACNNNNNNTCC 2 cut(s) 402, 434
AluBI AGCT 8 cut(s) 45, 314, 327, 794, 841, 961, 1282, 1724
AluI AGCT 8 cut(s) 45, 314, 327, 794, 841, 961, 1282, 1724
Alw21I GWGCWC 3 cut(s) 922, 1187, 1692
Alw26I GTCTC 5 cut(s) 57, 178, 543, 1568, 1624
AlwI GGATC 5 cut(s) 12, 96, 431, 1768, 1781
Aor13HI TCCGGA 1 cut(s) 1303
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 7 cut(s) 207, 240, 817, 854, 886, 1443, 1705
ApoI RAATTY 4 cut(s) 143, 358, 1645, 1655
AseI ATTAAT 1 cut(s) 1086
Asp700I GAANNNNTTC 2 cut(s) 1149, 1518
AspLEI GCGC 1 cut(s) 298
AsuHPI GGTGA 5 cut(s) 80, 604, 1136, 1148, 1381
AsuII TTCGAA 1 cut(s) 1786
BaeGI GKGCMC 2 cut(s) 1259, 1613
BamHI GGATCC 2 cut(s) 4, 1773
BauI CACGAG 1 cut(s) 921
BbrPI CACGTG 1 cut(s) 238
Bbv12I GWGCWC 3 cut(s) 922, 1187, 1692
BccI CCATC 4 cut(s) 986, 1547, 1551, 1564
BceAI ACGGC 6 cut(s) 122, 390, 594, 909, 981, 1206
BcgI CGANNNNNNTGC 8 cut(s) 280, 314, 718, 740, 752, 774, 1587, 1621
BciT130I CCWGG 3 cut(s) 86, 1178, 1401
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 5 cut(s) 57, 178, 543, 1568, 1624
BfaI CTAG 4 cut(s) 246, 495, 732, 1247
BfmI CTRYAG 3 cut(s) 299, 507, 1283
BfoI RGCGCY 1 cut(s) 299
BfuI GTATCC 1 cut(s) 364
Bme1390I CCNGG 3 cut(s) 86, 1178, 1401
BmiI GGNNCC 5 cut(s) 6, 1242, 1290, 1299, 1775
BmrFI CCNGG 3 cut(s) 86, 1178, 1401
BmsI GCATC 4 cut(s) 664, 770, 1092, 1391
BpmI CTGGAG 1 cut(s) 1422
Bpu14I TTCGAA 1 cut(s) 1786
BpuEI CTTGAG 1 cut(s) 70
BsaAI YACGTR 1 cut(s) 238
BsaJI CCNNGG 1 cut(s) 1177
BsaWI WCCGGW 2 cut(s) 541, 1303
BsaXI ACNNNNNCTCC 6 cut(s) 402, 432, 909, 939, 1575, 1605
Bsc4I CCNNNNNNNGG 3 cut(s) 19, 1062, 1285
Bse118I RCCGGY 1 cut(s) 815
Bse1I ACTGG 1 cut(s) 1784
Bse3DI GCAATG 4 cut(s) 752, 1162, 1167, 1359
BseAI TCCGGA 1 cut(s) 1303
BseBI CCWGG 3 cut(s) 86, 1178, 1401
BseDI CCNNGG 1 cut(s) 1177
BseGI GGATG 4 cut(s) 357, 792, 1312, 1539
BseLI CCNNNNNNNGG 3 cut(s) 19, 1062, 1285
BseMI GCAATG 4 cut(s) 752, 1162, 1167, 1359
BseMII CTCAG 2 cut(s) 645, 795
BseNI ACTGG 1 cut(s) 1784
BseRI GAGGAG 6 cut(s) 219, 324, 851, 1281, 1290, 1454
BseSI GKGCMC 2 cut(s) 1259, 1613
BsgI GTGCAG 3 cut(s) 218, 1643, 1719
Bsh1236I CGCG 1 cut(s) 1100
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 7 cut(s) 209, 242, 819, 856, 888, 1445, 1707
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 3 cut(s) 922, 1187, 1692
BsiSI CCGG 5 cut(s) 542, 816, 1056, 1295, 1304
BslFI GGGAC 2 cut(s) 577, 1715
BslI CCNNNNNNNGG 3 cut(s) 19, 1062, 1285
BsmAI GTCTC 5 cut(s) 57, 178, 543, 1568, 1624
BsmBI CGTCTC 2 cut(s) 57, 1624
BsmFI GGGAC 2 cut(s) 577, 1715
BsmI GAATGC 2 cut(s) 1094, 1428
BsnI GGCC 7 cut(s) 209, 242, 819, 856, 888, 1445, 1707
Bsp119I TTCGAA 1 cut(s) 1786
Bsp1286I GDGCHC 5 cut(s) 922, 1187, 1259, 1613, 1692
Bsp13I TCCGGA 1 cut(s) 1303
Bsp143I GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
Bsp68I TCGCGA 1 cut(s) 1100
BspACI CCGC 9 cut(s) 23, 206, 243, 341, 394, 591, 853, 905, 1446
BspANI GGCC 7 cut(s) 209, 242, 819, 856, 888, 1445, 1707
BspCNI CTCAG 2 cut(s) 646, 794
BspEI TCCGGA 1 cut(s) 1303
BspFNI CGCG 1 cut(s) 1100
BspLI GGNNCC 5 cut(s) 6, 1242, 1290, 1299, 1775
BspMAI CTGCAG 3 cut(s) 303, 511, 1287
BspPI GGATC 5 cut(s) 12, 96, 431, 1768, 1781
BspT104I TTCGAA 1 cut(s) 1786
BsrBI CCGCTC 1 cut(s) 853
BsrDI GCAATG 4 cut(s) 752, 1162, 1167, 1359
BsrFI RCCGGY 1 cut(s) 815
BsrI ACTGG 1 cut(s) 1784
BssAI RCCGGY 1 cut(s) 815
BssECI CCNNGG 1 cut(s) 1177
BssMI GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
BssSI CACGAG 1 cut(s) 921
Bst2BI CACGAG 1 cut(s) 921
Bst2UI CCWGG 3 cut(s) 86, 1178, 1401
Bst4CI ACNGT 7 cut(s) 68, 401, 447, 693, 1369, 1531, 1696
BstAPI GCANNNNNTGC 2 cut(s) 515, 812
BstBAI YACGTR 1 cut(s) 238
BstBI TTCGAA 1 cut(s) 1786
BstC8I GCNNGC 6 cut(s) 288, 588, 817, 1196, 1287, 1397
BstDEI CTNAG 5 cut(s) 654, 772, 781, 957, 1321
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 4 cut(s) 357, 792, 1312, 1539
BstFNI CGCG 1 cut(s) 1100
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 8 cut(s) 7, 91, 439, 871, 1063, 1269, 1312, 1776
BstMAI GTCTC 5 cut(s) 57, 178, 543, 1568, 1624
BstMBI GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 7 cut(s) 515, 587, 812, 850, 902, 1191, 1295
BstNI CCWGG 3 cut(s) 86, 1178, 1401
BstNSI RCATGY 3 cut(s) 386, 905, 1117
BstSCI CCNGG 3 cut(s) 84, 1176, 1399
BstSFI CTRYAG 3 cut(s) 299, 507, 1283
BstSLI GKGCMC 2 cut(s) 1259, 1613
BstUI CGCG 1 cut(s) 1100
BstX2I RGATCY 3 cut(s) 4, 88, 1773
BstYI RGATCY 3 cut(s) 4, 88, 1773
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 7 cut(s) 209, 242, 819, 856, 888, 1445, 1707
BtgZI GCGATG 2 cut(s) 118, 1115
BtsCI GGATG 4 cut(s) 357, 792, 1312, 1539
BtsIMutI CAGTG 3 cut(s) 1107, 1736, 1777
BtuMI TCGCGA 1 cut(s) 1100
Cac8I GCNNGC 6 cut(s) 288, 588, 817, 1196, 1287, 1397
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 815
CseI GACGC 1 cut(s) 1467
Csp6I GTAC 2 cut(s) 397, 940
CviAII CATG 7 cut(s) 383, 800, 812, 902, 1075, 1114, 1793
CviQI GTAC 2 cut(s) 397, 940
DdeI CTNAG 5 cut(s) 654, 772, 781, 957, 1321
DpnI GATC 8 cut(s) 6, 90, 438, 870, 1062, 1268, 1311, 1775
DpnII GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
DraI TTTAAA 2 cut(s) 363, 1411
DrdI GACNNNNNNGTC 2 cut(s) 38, 640
DseDI GACNNNNNNGTC 2 cut(s) 38, 640
EaeI YGGCCR 3 cut(s) 207, 240, 817
Eco47III AGCGCT 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 83, 1007, 1760
Eco72I CACGTG 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 143
EcoRII CCWGG 3 cut(s) 84, 1176, 1399
Esp3I CGTCTC 2 cut(s) 57, 1624
FaeI CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1796
FaqI GGGAC 2 cut(s) 577, 1715
FatI CATG 7 cut(s) 382, 799, 811, 901, 1074, 1113, 1792
FokI GGATG 4 cut(s) 364, 799, 1319, 1526
FspBI CTAG 4 cut(s) 246, 495, 732, 1247
GlaI GCGC 1 cut(s) 297
GsuI CTGGAG 1 cut(s) 1422
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 7 cut(s) 209, 242, 819, 856, 888, 1445, 1707
HapII CCGG 5 cut(s) 542, 816, 1056, 1295, 1304
HgaI GACGC 1 cut(s) 1467
HhaI GCGC 1 cut(s) 298
Hin1II CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1796
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 7 cut(s) 57, 178, 473, 503, 536, 718, 1514
HpaII CCGG 5 cut(s) 542, 816, 1056, 1295, 1304
HphI GGTGA 5 cut(s) 80, 604, 1136, 1148, 1381
Hpy166II GTNNAC 2 cut(s) 1072, 1139
Hpy188I TCNGA 6 cut(s) 62, 102, 351, 1065, 1271, 1524
Hpy188III TCNNGA 8 cut(s) 49, 175, 440, 653, 722, 1099, 1304, 1748
Hpy8I GTNNAC 2 cut(s) 1072, 1139
HpyAV CCTTC 8 cut(s) 22, 107, 201, 493, 1031, 1060, 1246, 1492
HpyCH4III ACNGT 7 cut(s) 68, 401, 447, 693, 1369, 1531, 1696
HpyCH4IV ACGT 5 cut(s) 72, 237, 669, 1373, 1633
HpyF10VI GCNNNNNNNGC 7 cut(s) 515, 587, 812, 850, 902, 1191, 1295
HpyF3I CTNAG 5 cut(s) 654, 772, 781, 957, 1321
HpySE526I ACGT 5 cut(s) 72, 237, 669, 1373, 1633
Hsp92II CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1796
HspAI GCGC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 1303
KroI GCCGGC 1 cut(s) 815
KroNI GCCGGC 1 cut(s) 817
Kzo9I GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
LmnI GCTCC 5 cut(s) 311, 838, 917, 1294, 1303
LweI GCATC 4 cut(s) 664, 770, 1092, 1391
MaeI CTAG 4 cut(s) 246, 495, 732, 1247
MaeII ACGT 5 cut(s) 72, 237, 669, 1373, 1633
MaeIII GTNAC 8 cut(s) 68, 574, 595, 693, 1124, 1223, 1369, 1637
MalI GATC 8 cut(s) 6, 90, 438, 870, 1062, 1268, 1311, 1775
MbiI CCGCTC 1 cut(s) 853
MboI GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
MboII GAAGA 3 cut(s) 66, 83, 961
MflI RGATCY 3 cut(s) 4, 88, 1773
MhlI GDGCHC 5 cut(s) 922, 1187, 1259, 1613, 1692
MluCI AATT 9 cut(s) 143, 358, 1149, 1235, 1494, 1518, 1645, 1655, 1797
MlyI GAGTC 2 cut(s) 512, 545
MmeI TCCRAC 1 cut(s) 1231
MroI TCCGGA 1 cut(s) 1303
MroNI GCCGGC 1 cut(s) 815
MroXI GAANNNNTTC 2 cut(s) 1149, 1518
MseI TTAA 7 cut(s) 362, 425, 663, 927, 1086, 1410, 1801
MslI CAYNNNNRTG 3 cut(s) 1112, 1394, 1697
MspA1I CMGCKG 2 cut(s) 593, 1282
MspI CCGG 5 cut(s) 542, 816, 1056, 1295, 1304
MspR9I CCNGG 3 cut(s) 86, 1178, 1401
Mva1269I GAATGC 2 cut(s) 1094, 1428
MvaI CCWGG 3 cut(s) 86, 1178, 1401
MvnI CGCG 1 cut(s) 1100
MwoI GCNNNNNNNGC 7 cut(s) 515, 587, 812, 850, 902, 1191, 1295
NaeI GCCGGC 1 cut(s) 817
NdeII GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
NgoMIV GCCGGC 1 cut(s) 815
NlaIII CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1796
NlaIV GGNNCC 5 cut(s) 6, 1242, 1290, 1299, 1775
NmeAIII GCCGAG 1 cut(s) 1653
NmuCI GTSAC 6 cut(s) 68, 574, 1124, 1223, 1369, 1637
NruI TCGCGA 1 cut(s) 1100
NspI RCATGY 3 cut(s) 386, 905, 1117
NspV TTCGAA 1 cut(s) 1786
OliI CACNNNNGTG 1 cut(s) 1394
PciI ACATGT 1 cut(s) 1113
PctI GAATGC 2 cut(s) 1094, 1428
PdiI GCCGGC 1 cut(s) 817
PdmI GAANNNNTTC 2 cut(s) 1149, 1518
PfeI GAWTC 5 cut(s) 57, 178, 473, 718, 1514
PflFI GACNNNGTC 1 cut(s) 1635
Ple19I CGATCG 1 cut(s) 1063
PleI GAGTC 2 cut(s) 511, 544
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 2 cut(s) 511, 544
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 1 cut(s) 1113
PshBI ATTAAT 1 cut(s) 1086
PsiI TTATAA 1 cut(s) 974
Psp6I CCWGG 3 cut(s) 84, 1176, 1399
PspCI CACGTG 1 cut(s) 238
PspGI CCWGG 3 cut(s) 84, 1176, 1399
PspN4I GGNNCC 5 cut(s) 6, 1242, 1290, 1299, 1775
PstI CTGCAG 3 cut(s) 303, 511, 1287
PsuI RGATCY 3 cut(s) 4, 88, 1773
PsyI GACNNNGTC 1 cut(s) 1635
PvuI CGATCG 1 cut(s) 1063
PvuII CAGCTG 1 cut(s) 1282
RruI TCGCGA 1 cut(s) 1100
RsaI GTAC 2 cut(s) 398, 941
RsaNI GTAC 2 cut(s) 397, 940
RseI CAYNNNNRTG 3 cut(s) 1112, 1394, 1697
SaqAI TTAA 7 cut(s) 362, 425, 663, 927, 1086, 1410, 1801
Sau3AI GATC 8 cut(s) 4, 88, 436, 868, 1060, 1266, 1309, 1773
SchI GAGTC 2 cut(s) 512, 545
ScrFI CCNGG 3 cut(s) 86, 1178, 1401
SduI GDGCHC 5 cut(s) 922, 1187, 1259, 1613, 1692
SfaNI GCATC 4 cut(s) 664, 770, 1092, 1391
SfcI CTRYAG 3 cut(s) 299, 507, 1283
SfuI TTCGAA 1 cut(s) 1786
SmiMI CAYNNNNRTG 3 cut(s) 1112, 1394, 1697
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
Sse9I AATT 9 cut(s) 143, 358, 1149, 1235, 1494, 1518, 1645, 1655, 1797
SsiI CCGC 9 cut(s) 23, 206, 243, 341, 394, 591, 853, 905, 1446
SspI AATATT 2 cut(s) 1132, 1719
SspMI CTAG 4 cut(s) 246, 495, 732, 1247
StyD4I CCNGG 3 cut(s) 84, 1176, 1399
TaaI ACNGT 7 cut(s) 68, 401, 447, 693, 1369, 1531, 1696
TaiI ACGT 5 cut(s) 75, 240, 672, 1376, 1636
TaqI TCGA 6 cut(s) 176, 282, 559, 1230, 1676, 1786
TasI AATT 9 cut(s) 143, 358, 1149, 1235, 1494, 1518, 1645, 1655, 1797
TatI WGTACW 1 cut(s) 939
TauI GCSGC 8 cut(s) 26, 209, 245, 343, 593, 856, 908, 1448
TfiI GAWTC 5 cut(s) 57, 178, 473, 718, 1514
Tru1I TTAA 7 cut(s) 362, 425, 663, 927, 1086, 1410, 1801
Tru9I TTAA 7 cut(s) 362, 425, 663, 927, 1086, 1410, 1801
TscAI CASTG 3 cut(s) 1114, 1743, 1784
TseFI GTSAC 6 cut(s) 68, 574, 1124, 1223, 1369, 1637
Tsp45I GTSAC 6 cut(s) 68, 574, 1124, 1223, 1369, 1637
TspDTI ATGAA 3 cut(s) 443, 486, 1527
TspGWI ACGGA 2 cut(s) 48, 1434
TspRI CASTG 3 cut(s) 1114, 1743, 1784
Tth111I GACNNNGTC 1 cut(s) 1635
VspI ATTAAT 1 cut(s) 1086
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 4 cut(s) 143, 358, 1645, 1655
XceI RCATGY 3 cut(s) 386, 905, 1117
XcmI CCANNNNNNNNNTGG 1 cut(s) 1585
XmnI GAANNNNTTC 2 cut(s) 1149, 1518
XspI CTAG 4 cut(s) 246, 495, 732, 1247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.