Rh3CG278000

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000319
Physical Location & Seq
Forward (+)
27916640 .. 27920039
3400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG278000.1

Sequence Viewer

Length: 1791 bp
ATGGATCCTTCTCTCTATAGAGCAGCAAGATCTGGTGATATAAATTTCCTGAATATTGAAGATGCATGTATTGATCCTCTCCATCAAAGAACGCCTAAAGAGAACAATCTTCTTCACATCGCTGCGGAATTCAAGCAAATAGATTTCTTCAAACATGTCAAACTCAACTATGAATCTCCGCGGTTTTGGGTCACCAACAAGTCCGGCGACACTCCATTGCACGTCGCAGCCAGAGTAGGCTGTCATGCAGTTGTTGAGTTTGTCATTGACCACACAAAATCATTCCCCCTCGAAGGAGCTGATGATCAGGAAAGCGTACCAGCTGATGCTGAAACTTATAAACAACTGCTCAGAATGCCTAATTTTCAAAATGACACAGCTTTGCATATTGCTGTGCGATATGGTCACGATAAGGTAGCGACTCTACTAATCAAAGCTGACCCTGAACTCTGTTATTACACAAATAGTGCGAACGAGTCGCCGTTGTTCCTTGCTATTAGAAAGAGCTCTCCGAGCATCGCTAGTTACATTTTAGAGGAGTCTCCTTCTCATGCGTCTCCTTATCTTCAAGGGACTAATGGTTTAACGGCTTTGCACGCGGCAGTAACTCACCAAGACCTTGCAAGCAAAGGCATTGTGAAGACTATGGTCTCCACGAATCCTGAGATAATAAGAGAGCCTGATGCACTTGGGTGGACTCCTTTACATTATGCAGCACTGATAGGGAACCTAGAAGCAACTCGAGTGCTACTTCAGTCCAATAGTTCTGTTTCTTACATAATGGATAATTCCGGGTCGTCACCTCTCCATATTGCGGCTTATGCAGGCCACACTACTGTAATGGAAGAGCTTATTCGATGTCGGCCTGATACCTGTGATCTGGTCAATGAAAATGGTCAATCAGCTCTACATGCTGCAGTTATAGGTTCACGAATTAATGTTGTCAAATACATATTGAAGACTCCTGGGCTTTCAGGACTTACAAATGAAGCAGATAAAGATGGAAACACTCCATTACATCTAGCTGCTATTTGCCGCAACCGAGACATTATAAGAATTTTGGCACAAGACCGCAGAGTAGACATTCTCTCTTTCAATAAGGAATCCTCAACCGCCCTCGACATTTTTCTGGGCAACAATATTGGAGAACAGGAAATTATTGGCAATAGTAGAACGATTTTGCACCACCTGAAGTGTTCTGTTGGTGTGCCATTTCTCCAACAACAAATCAGCCATAATTTGAAGAAAATGACAACTCGAGAGAGGGATACGTCTGACACACTGGCCATTATTGGCATCAAGAGAGAACAGCCGCAGGCTAATTTGGATCAAGCCTTGAAAAGGTATGATAATAAACTATTGGTAGCAACGCTAATCGCAACGGTCACATTTGCAGCAGGTTTCACCAATGTTCCTGGAGGATTTAAAAACGACGGATCACCAGTTTTATACGAACATATGTCTTTCAGTTTCTTCCAGTTTTGGAATATGGTATCCTTCATTCTCTCTGTTCTTGCAATTCTCAATGAATCAACTCCGCTAACTGTATTATCAACCCGTTTACCCACGCCTGCAAGTCTCATTCAGTTTTCCATTGGTGGAATGGTTATAGCATTTCTCGCGGGCACGGCAACACTGCAACCCAAACATCCCCGAGGCAGTCCTGCTGATAAATTGTTCAGTGTAATGGTCCTCACTTTTCTCGTATTAGCTGTCATCCTTGTGTCTGTGTTCGTAGTTCAGTTATATAGGGTAAGAAGGATGCGGGTGCTCCTGAACGGCGTAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

596

Amino Acids

65.7

Weight (kDa)

6.88

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 92 7.3e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 38 - 147 1.8e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 111 - 180 3.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 208 - 286 6.6e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 269 - 362 2.6e-16 Ankyrin repeats (3 copies)
Ank_5 PF13857 328 - 375 2.2e-07 Ankyrin repeats (many copies)
PGG PF13962 452 - 544 2.1e-16 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 339, 1052
Acc36I ACCTGC 1 cut(s) 1388
AccI GTMKAC 1 cut(s) 1080
AccII CGCG 3 cut(s) 181, 599, 1622
AclWI GGATC 4 cut(s) 12, 68, 1335, 1444
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 3 cut(s) 43, 128, 1056
AcuI CTGAAG 2 cut(s) 737, 1211
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
AflIII ACRYGT 1 cut(s) 154
AgsI TTSAA 9 cut(s) 59, 133, 151, 368, 569, 958, 1096, 1243, 1339
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 2 cut(s) 964, 1414
AleI CACNNNNGTG 1 cut(s) 691
AluBI AGCT 9 cut(s) 299, 323, 380, 437, 507, 850, 905, 1025, 1712
AluI AGCT 9 cut(s) 299, 323, 380, 437, 507, 850, 905, 1025, 1712
Alw21I GWGCWC 2 cut(s) 509, 1773
Alw26I GTCTC 5 cut(s) 546, 561, 655, 1038, 1583
AlwI GGATC 4 cut(s) 12, 68, 1335, 1444
Ama87I CYCGRG 3 cut(s) 741, 1257, 1653
AoxI GGCC 3 cut(s) 826, 863, 1284
ApeKI GCWGC 7 cut(s) 23, 122, 227, 713, 914, 1025, 1394
ApoI RAATTY 3 cut(s) 43, 128, 1056
AseI ATTAAT 1 cut(s) 936
AspS9I GGNCC 1 cut(s) 1690
AsuC2I CCSGG 1 cut(s) 793
AsuHPI GGTGA 6 cut(s) 47, 184, 602, 792, 1396, 1431
AvaI CYCGRG 3 cut(s) 741, 1257, 1653
AvaII GGWCC 1 cut(s) 1690
BaeGI GKGCMC 1 cut(s) 1628
BalI TGGCCA 1 cut(s) 1286
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 509
BbsI GAAGAC 2 cut(s) 647, 965
Bbv12I GWGCWC 2 cut(s) 509, 1773
BbvI GCAGC 7 cut(s) 35, 109, 239, 725, 901, 1012, 1406
BccI CCATC 2 cut(s) 90, 995
BceAI ACGGC 3 cut(s) 466, 603, 1644
BciT130I CCWGG 2 cut(s) 966, 1416
BciVI GTATCC 2 cut(s) 1261, 1504
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 1 cut(s) 793
BcoDI GTCTC 5 cut(s) 546, 561, 655, 1038, 1583
BfaI CTAG 3 cut(s) 522, 731, 1022
BfmI CTRYAG 2 cut(s) 16, 915
BfuAI ACCTGC 1 cut(s) 1388
BfuI GTATCC 2 cut(s) 1261, 1504
BglII AGATCT 1 cut(s) 29
Bme1390I CCNGG 3 cut(s) 793, 966, 1416
Bme18I GGWCC 1 cut(s) 1690
BmeT110I CYCGRG 3 cut(s) 741, 1257, 1653
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 1690
BmiI GGNNCC 2 cut(s) 6, 728
BmrFI CCNGG 3 cut(s) 793, 966, 1416
BmsI GCATC 6 cut(s) 52, 316, 525, 673, 1305, 1752
BoxI GACNNNNGTC 1 cut(s) 647
BpiI GAAGAC 2 cut(s) 647, 965
BpmI CTGGAG 1 cut(s) 1437
BpuMI CCSGG 1 cut(s) 793
BsaI GGTCTC 1 cut(s) 655
BsaJI CCNNGG 3 cut(s) 179, 965, 1654
Bsc4I CCNNNNNNNGG 3 cut(s) 293, 814, 1341
Bse1I ACTGG 3 cut(s) 1287, 1442, 1477
Bse3DI GCAATG 1 cut(s) 215
BseBI CCWGG 2 cut(s) 966, 1416
BseDI CCNNGG 3 cut(s) 179, 965, 1654
BseGI GGATG 3 cut(s) 1648, 1716, 1767
BseLI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
BseMI GCAATG 1 cut(s) 215
BseMII CTCAG 2 cut(s) 364, 654
BseNI ACTGG 3 cut(s) 1287, 1442, 1477
BseRI GAGGAG 1 cut(s) 551
BseSI GKGCMC 1 cut(s) 1628
BseXI GCAGC 7 cut(s) 35, 109, 239, 725, 901, 1012, 1406
Bsh1236I CGCG 3 cut(s) 181, 599, 1622
BshFI GGCC 3 cut(s) 828, 865, 1286
BsiHKAI GWGCWC 2 cut(s) 509, 1773
BsiHKCI CYCGRG 3 cut(s) 741, 1257, 1653
BsiSI CCGG 2 cut(s) 204, 792
BslFI GGGAC 1 cut(s) 586
BslI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
BsmAI GTCTC 5 cut(s) 546, 561, 655, 1038, 1583
BsmBI CGTCTC 1 cut(s) 561
BsmFI GGGAC 1 cut(s) 586
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 3 cut(s) 828, 865, 1286
Bso31I GGTCTC 1 cut(s) 655
BsoBI CYCGRG 3 cut(s) 741, 1257, 1653
Bsp1286I GDGCHC 3 cut(s) 509, 1628, 1773
Bsp143I GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
BspANI GGCC 3 cut(s) 828, 865, 1286
BspCNI CTCAG 2 cut(s) 363, 655
BspFNI CGCG 3 cut(s) 181, 599, 1622
BspLI GGNNCC 2 cut(s) 6, 728
BspMAI CTGCAG 1 cut(s) 919
BspMI ACCTGC 1 cut(s) 1388
BspPI GGATC 4 cut(s) 12, 68, 1335, 1444
BspQI GCTCTTC 1 cut(s) 840
BspTNI GGTCTC 1 cut(s) 655
BsrDI GCAATG 1 cut(s) 215
BsrI ACTGG 3 cut(s) 1287, 1442, 1477
BssECI CCNNGG 3 cut(s) 179, 965, 1654
BssMI GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
Bst2UI CCWGG 2 cut(s) 966, 1416
Bst4CI ACNGT 3 cut(s) 838, 1384, 1546
Bst6I CTCTTC 1 cut(s) 840
BstC8I GCNNGC 6 cut(s) 597, 625, 826, 1317, 1572, 1624
BstDEI CTNAG 2 cut(s) 350, 663
BstDSI CCRYGG 1 cut(s) 179
BstEII GGTNACC 1 cut(s) 190
BstENI CCTNNNNNAGG 1 cut(s) 1339
BstF5I GGATG 3 cut(s) 1648, 1716, 1767
BstFNI CGCG 3 cut(s) 181, 599, 1622
BstKTI GATC 7 cut(s) 7, 32, 76, 307, 880, 1330, 1439
BstMAI GTCTC 5 cut(s) 546, 561, 655, 1038, 1583
BstMBI GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
BstMWI GCNNNNNNNGC 7 cut(s) 355, 513, 596, 821, 911, 1619, 1628
BstNI CCWGG 2 cut(s) 966, 1416
BstNSI RCATGY 3 cut(s) 69, 158, 914
BstPAI GACNNNNGTC 1 cut(s) 647
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 3 cut(s) 791, 964, 1414
BstSFI CTRYAG 2 cut(s) 16, 915
BstSLI GKGCMC 1 cut(s) 1628
BstUI CGCG 3 cut(s) 181, 599, 1622
BstV1I GCAGC 7 cut(s) 35, 109, 239, 725, 901, 1012, 1406
BstV2I GAAGAC 2 cut(s) 647, 965
BstX2I RGATCY 2 cut(s) 4, 29
BstYI RGATCY 2 cut(s) 4, 29
BsuI GTATCC 2 cut(s) 1261, 1504
BsuRI GGCC 3 cut(s) 828, 865, 1286
BtgI CCRYGG 1 cut(s) 179
BtgZI GCGATG 2 cut(s) 103, 502
BtrI CACGTC 1 cut(s) 223
BtsCI GGATG 3 cut(s) 1648, 1716, 1767
BtsI GCAGTG 1 cut(s) 1634
BtsIMutI CAGTG 4 cut(s) 716, 1280, 1634, 1687
BveI ACCTGC 1 cut(s) 1388
Cac8I GCNNGC 6 cut(s) 597, 625, 826, 1317, 1572, 1624
Cfr13I GGNCC 1 cut(s) 1690
Cfr42I CCGCGG 1 cut(s) 182
CseI GACGC 1 cut(s) 543
Csp6I GTAC 1 cut(s) 317
CviAII CATG 5 cut(s) 66, 155, 245, 551, 911
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 2 cut(s) 350, 663
DpnI GATC 7 cut(s) 6, 31, 75, 306, 879, 1329, 1438
DpnII GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
DraI TTTAAA 1 cut(s) 1426
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
Ecl136II GAGCTC 1 cut(s) 507
Eco24I GRGCYC 1 cut(s) 509
Eco31I GGTCTC 1 cut(s) 655
Eco47I GGWCC 1 cut(s) 1690
Eco53kI GAGCTC 1 cut(s) 507
Eco57I CTGAAG 2 cut(s) 737, 1211
Eco88I CYCGRG 3 cut(s) 741, 1257, 1653
Eco91I GGTNACC 1 cut(s) 190
EcoICRI GAGCTC 1 cut(s) 507
EcoNI CCTNNNNNAGG 1 cut(s) 1339
EcoO65I GGTNACC 1 cut(s) 190
EcoRI GAATTC 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 964, 1414
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 509
Esp3I CGTCTC 1 cut(s) 561
FaeI CATG 5 cut(s) 69, 158, 248, 554, 914
FaqI GGGAC 1 cut(s) 586
FatI CATG 5 cut(s) 65, 154, 244, 550, 910
FauI CCCGC 2 cut(s) 1615, 1758
FauNDI CATATG 1 cut(s) 1458
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 1080
FokI GGATG 3 cut(s) 1635, 1703, 1774
FriOI GRGCYC 1 cut(s) 509
FspBI CTAG 3 cut(s) 522, 731, 1022
GsuI CTGGAG 1 cut(s) 1437
HaeIII GGCC 3 cut(s) 828, 865, 1286
HapII CCGG 2 cut(s) 204, 792
HgaI GACGC 1 cut(s) 543
Hin1II CATG 5 cut(s) 69, 158, 248, 554, 914
HinfI GANTC 9 cut(s) 173, 421, 476, 539, 658, 697, 961, 1103, 1529
HpaII CCGG 2 cut(s) 204, 792
HphI GGTGA 6 cut(s) 47, 184, 602, 792, 1396, 1431
Hpy166II GTNNAC 4 cut(s) 696, 929, 1081, 1562
Hpy188I TCNGA 3 cut(s) 353, 513, 1276
Hpy188III TCNNGA 9 cut(s) 49, 308, 407, 662, 930, 975, 1259, 1300, 1774
Hpy8I GTNNAC 4 cut(s) 696, 929, 1081, 1562
Hpy99I CGWCG 2 cut(s) 227, 1436
HpyAV CCTTC 5 cut(s) 18, 287, 555, 1507, 1752
HpyCH4III ACNGT 3 cut(s) 838, 1384, 1546
HpyCH4IV ACGT 2 cut(s) 222, 1271
HpyF10VI GCNNNNNNNGC 7 cut(s) 355, 513, 596, 821, 911, 1619, 1628
HpyF3I CTNAG 2 cut(s) 350, 663
HpySE526I ACGT 2 cut(s) 222, 1271
Hsp92II CATG 5 cut(s) 69, 158, 248, 554, 914
Ksp22I TGATCA 1 cut(s) 304
KspI CCGCGG 1 cut(s) 182
Kzo9I GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 2 cut(s) 296, 1776
Lsp1109I GCAGC 7 cut(s) 35, 109, 239, 725, 901, 1012, 1406
LweI GCATC 6 cut(s) 52, 316, 525, 673, 1305, 1752
MaeI CTAG 3 cut(s) 522, 731, 1022
MaeII ACGT 2 cut(s) 222, 1271
MaeIII GTNAC 6 cut(s) 190, 404, 524, 604, 798, 1384
MalI GATC 7 cut(s) 6, 31, 75, 306, 879, 1329, 1438
MboI GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
MflI RGATCY 2 cut(s) 4, 29
MhlI GDGCHC 3 cut(s) 509, 1628, 1773
MlsI TGGCCA 1 cut(s) 1286
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 5 cut(s) 415, 485, 548, 691, 955
MmeI TCCRAC 1 cut(s) 1243
Mox20I TGGCCA 1 cut(s) 1286
Mph1103I ATGCAT 1 cut(s) 67
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 3 cut(s) 584, 936, 1425
MslI CAYNNNNRTG 2 cut(s) 691, 1721
Msp20I TGGCCA 1 cut(s) 1286
MspA1I CMGCKG 2 cut(s) 181, 323
MspI CCGG 2 cut(s) 204, 792
MspR9I CCNGG 3 cut(s) 793, 966, 1416
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 2 cut(s) 966, 1416
MvnI CGCG 3 cut(s) 181, 599, 1622
MwoI GCNNNNNNNGC 7 cut(s) 355, 513, 596, 821, 911, 1619, 1628
NciI CCSGG 1 cut(s) 793
NdeI CATATG 1 cut(s) 1458
NdeII GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
NlaIII CATG 5 cut(s) 69, 158, 248, 554, 914
NlaIV GGNNCC 2 cut(s) 6, 728
NmuCI GTSAC 4 cut(s) 190, 404, 798, 1384
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 3 cut(s) 69, 158, 914
OliI CACNNNNGTG 1 cut(s) 691
PaeR7I CTCGAG 2 cut(s) 741, 1257
PciI ACATGT 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 840
PctI GAATGC 1 cut(s) 360
PfeI GAWTC 4 cut(s) 173, 658, 1103, 1529
PfoI TCCNGGA 1 cut(s) 1414
PleI GAGTC 5 cut(s) 415, 484, 547, 691, 955
PpsI GAGTC 5 cut(s) 415, 484, 547, 691, 955
PscI ACATGT 1 cut(s) 154
PshAI GACNNNNGTC 1 cut(s) 647
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 2 cut(s) 339, 1052
Psp124BI GAGCTC 1 cut(s) 509
Psp6I CCWGG 2 cut(s) 964, 1414
PspEI GGTNACC 1 cut(s) 190
PspGI CCWGG 2 cut(s) 964, 1414
PspN4I GGNNCC 2 cut(s) 6, 728
PspPI GGNCC 1 cut(s) 1690
PspXI VCTCGAGB 1 cut(s) 741
PstI CTGCAG 1 cut(s) 919
PsuI RGATCY 2 cut(s) 4, 29
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
RseI CAYNNNNRTG 2 cut(s) 691, 1721
SacI GAGCTC 1 cut(s) 509
SacII CCGCGG 1 cut(s) 182
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 3 cut(s) 584, 936, 1425
Sau3AI GATC 7 cut(s) 4, 29, 73, 304, 877, 1327, 1436
Sau96I GGNCC 1 cut(s) 1690
SchI GAGTC 5 cut(s) 415, 485, 548, 691, 955
ScrFI CCNGG 3 cut(s) 793, 966, 1416
SduI GDGCHC 3 cut(s) 509, 1628, 1773
SfaNI GCATC 6 cut(s) 52, 316, 525, 673, 1305, 1752
SfcI CTRYAG 2 cut(s) 16, 915
Sfr274I CTCGAG 2 cut(s) 741, 1257
Sfr303I CCGCGG 1 cut(s) 182
SgrBI CCGCGG 1 cut(s) 182
SinI GGWCC 1 cut(s) 1690
SlaI CTCGAG 2 cut(s) 741, 1257
SmiMI CAYNNNNRTG 2 cut(s) 691, 1721
SmlI CTYRAG 2 cut(s) 741, 1257
SmoI CTYRAG 2 cut(s) 741, 1257
SspI AATATT 2 cut(s) 55, 1141
SspMI CTAG 3 cut(s) 522, 731, 1022
SstI GAGCTC 1 cut(s) 509
StyD4I CCNGG 3 cut(s) 791, 964, 1414
TaaI ACNGT 3 cut(s) 838, 1384, 1546
TaiI ACGT 2 cut(s) 225, 1274
TaqI TCGA 5 cut(s) 291, 742, 856, 1119, 1258
TauI GCSGC 4 cut(s) 602, 818, 1038, 1315
TfiI GAWTC 4 cut(s) 173, 658, 1103, 1529
Tru1I TTAA 3 cut(s) 584, 936, 1425
Tru9I TTAA 3 cut(s) 584, 936, 1425
TscAI CASTG 4 cut(s) 723, 1287, 1641, 1687
TseFI GTSAC 4 cut(s) 190, 404, 798, 1384
TseI GCWGC 7 cut(s) 23, 122, 227, 713, 914, 1025, 1394
Tsp45I GTSAC 4 cut(s) 190, 404, 798, 1384
TspDTI ATGAA 5 cut(s) 186, 903, 1002, 1489, 1542
TspGWI ACGGA 1 cut(s) 1449
TspRI CASTG 4 cut(s) 723, 1287, 1641, 1687
VpaK11BI GGWCC 1 cut(s) 1690
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 1339
XapI RAATTY 3 cut(s) 43, 128, 1056
XceI RCATGY 3 cut(s) 69, 158, 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 1600
XhoI CTCGAG 2 cut(s) 741, 1257
XmiI GTMKAC 1 cut(s) 1080
XspI CTAG 3 cut(s) 522, 731, 1022
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.