FvH4_5g30370

WAT1-related protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
21251150 .. 21257567
6418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g30370.t1

Sequence Viewer

Length: 1188 bp
ATGGAAACCTTGATAGAGCTTTGCAATGCTCTGAACGGCCTGAAGCCAGTGCTGTTAATGGTGGTGGCTCAGGCAGCCTTCGCCGGAGTCAACATTTTCTACAAACTCGCCGCTAACGATGGCATGAACACTAGTGTTGTTGTTGCCTATCGCTTCCTCTTCGCCACCGCTTTCATCACTCCTCTTGCTCTTTACTTGGAAAGAAACAGCAGGCCCAAGTTAACCTGGATGGTAGTACTACAAGCATCTCTGTGCGGCTTCTTTGGGGGATCAATGACACAAAACATGCAATTTGAAAGCATAGCCTTGACATCAGCGACATTTACTGCTGCTATAACTCAGCTGATTCCAGCCATAACCTTCGTTATGGCCGTCTTTTTCAGGTTGGAGAGACTGGACTTAAGGAGCGGAGGAGGGAGGGCAAAGGTTTTGGGAACATTGATGGGAATAGGAGGAGCAATGCTTATGACCTTTTATAAAGGTGTGGAAATCAATATTTGGTCCACTCATGTTAACCTCTTGCACAAAAGTGAGCAACCAAGCCACTATTTGGCAGCACCTACCAGTAAATCAGAATATACAGATCATGTATTGGGTTCTCTTCTCGCTATCGGCAGCTCTTTCGGTTATGCATTCTTTTTTATTTTTCAGGCGAAAATGGTTGAGAAATACCCTTGCTATTATTCAAGCACAGCTCTAATGTCACTTATGGGGTCGATACAGTCGGTTGGTTTTGCACTTTGCATGGAGAGGGATTGGAATCAATGGAAATTAGGTTGGAACATTAGACTCTTGACGGTTGCATACACGGGGATTGTGGCTACTGGAATAAGTTTGACAATACTAGCATTGTGTGTGCGCATGAAAGGCCCATTATTCGTAGCTGTTTTCAACCCTCTTCTGCTTGTGATAGTTGCCTTTGTTGGCTCTTTGCTCTTGGATGAGAAGTTGCATCTTGGAAGCGTGTTAGGATCAATAATAATCGTGGGTGGTTTATATGCCGTGTTGTGGGGTAAAAGCAAAGACATAAAGATGATGACGCAATCTGTGCCAACAAGCTTCGAGGAGGAAAAATATGCAGAATCACTTGAAGTTGTTATAAGGTCTCCAAATGACAAAGCCATCAACAATAAGAAAGAGAGTGAAGCAAATGTCAGTAATGATGAGCCAAATACATTGCCAACATGA

Protein Analysis

396

Amino Acids

43.3

Weight (kDa)

8.47

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 16 - 157 4.6e-15 EamA-like transporter family
EamA PF00892 198 - 336 1.4e-11 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 477, 1100
Acc16I TGCGCA 1 cut(s) 860
AccB7I CCANNNNNTGG 1 cut(s) 550
AccBSI CCGCTC 1 cut(s) 408
AciI CCGC 4 cut(s) 111, 168, 255, 408
AclWI GGATC 2 cut(s) 277, 979
AcoI YGGCCR 1 cut(s) 369
AcuI CTGAAG 1 cut(s) 62
AfaI GTAC 1 cut(s) 237
AfiI CCNNNNNNNGG 2 cut(s) 550, 1008
AflII CTTAAG 1 cut(s) 400
AgsI TTSAA 4 cut(s) 296, 687, 892, 1091
AhlI ACTAGT 1 cut(s) 131
AjnI CCWGG 1 cut(s) 224
AleI CACNNNNGTG 1 cut(s) 528
AluBI AGCT 6 cut(s) 19, 343, 618, 695, 884, 1059
AluI AGCT 6 cut(s) 19, 343, 618, 695, 884, 1059
Alw26I GTCTC 2 cut(s) 385, 1110
AlwI GGATC 2 cut(s) 277, 979
AoxI GGCC 4 cut(s) 37, 212, 369, 868
ApeKI GCWGC 4 cut(s) 74, 329, 554, 615
AspLEI GCGC 1 cut(s) 861
AspS9I GGNCC 3 cut(s) 213, 501, 869
AvaII GGWCC 1 cut(s) 501
BbvI GCAGC 4 cut(s) 86, 316, 566, 627
BccI CCATC 4 cut(s) 113, 223, 436, 1130
BceAI ACGGC 3 cut(s) 52, 356, 986
BcgI CGANNNNNNTGC 2 cut(s) 604, 638
BciT130I CCWGG 1 cut(s) 226
BcoDI GTCTC 2 cut(s) 385, 1110
BcuI ACTAGT 1 cut(s) 131
BfaI CTAG 2 cut(s) 132, 845
BfrI CTTAAG 1 cut(s) 400
BisI GCNGC 6 cut(s) 75, 111, 256, 330, 555, 616
BlsI GCNGC 6 cut(s) 76, 112, 257, 331, 556, 617
BmcAI AGTACT 1 cut(s) 237
Bme1390I CCNGG 1 cut(s) 226
Bme18I GGWCC 1 cut(s) 501
BmgT120I GGNCC 3 cut(s) 213, 501, 869
BmrFI CCNGG 1 cut(s) 226
BmsI GCATC 2 cut(s) 254, 961
Bpu10I CCTNAGC 1 cut(s) 69
BsaBI GATNNNNATC 1 cut(s) 759
BsaI GGTCTC 1 cut(s) 1110
Bsc4I CCNNNNNNNGG 2 cut(s) 550, 1008
Bse1I ACTGG 4 cut(s) 47, 399, 564, 829
Bse3DI GCAATG 3 cut(s) 31, 465, 1175
Bse8I GATNNNNATC 1 cut(s) 759
BseBI CCWGG 1 cut(s) 226
BseGI GGATG 2 cut(s) 234, 946
BseJI GATNNNNATC 1 cut(s) 759
BseLI CCNNNNNNNGG 2 cut(s) 550, 1008
BseMI GCAATG 3 cut(s) 31, 465, 1175
BseMII CTCAG 2 cut(s) 83, 353
BseNI ACTGG 4 cut(s) 47, 399, 564, 829
BseRI GAGGAG 4 cut(s) 171, 426, 468, 1079
BseXI GCAGC 4 cut(s) 86, 316, 566, 627
BshFI GGCC 4 cut(s) 39, 214, 371, 870
BsiSI CCGG 1 cut(s) 84
BslI CCNNNNNNNGG 2 cut(s) 550, 1008
BsmAI GTCTC 2 cut(s) 385, 1110
BsmI GAATGC 1 cut(s) 632
BsnI GGCC 4 cut(s) 39, 214, 371, 870
Bso31I GGTCTC 1 cut(s) 1110
Bsp143I GATC 3 cut(s) 269, 583, 971
BspACI CCGC 4 cut(s) 111, 168, 255, 408
BspANI GGCC 4 cut(s) 39, 214, 371, 870
BspCNI CTCAG 2 cut(s) 82, 352
BspPI GGATC 2 cut(s) 277, 979
BspTI CTTAAG 1 cut(s) 400
BspTNI GGTCTC 1 cut(s) 1110
BsrBI CCGCTC 1 cut(s) 408
BsrDI GCAATG 3 cut(s) 31, 465, 1175
BsrI ACTGG 4 cut(s) 47, 399, 564, 829
BssMI GATC 3 cut(s) 269, 583, 971
Bst2UI CCWGG 1 cut(s) 226
Bst4CI ACNGT 2 cut(s) 723, 799
Bst6I CTCTTC 3 cut(s) 164, 606, 903
BstAFI CTTAAG 1 cut(s) 400
BstAPI GCANNNNNTGC 1 cut(s) 1048
BstC8I GCNNGC 1 cut(s) 212
BstDEI CTNAG 2 cut(s) 69, 339
BstF5I GGATG 2 cut(s) 234, 946
BstHHI GCGC 1 cut(s) 861
BstKTI GATC 3 cut(s) 272, 586, 974
BstMAI GTCTC 2 cut(s) 385, 1110
BstMBI GATC 3 cut(s) 269, 583, 971
BstMWI GCNNNNNNNGC 4 cut(s) 74, 80, 867, 1048
BstNI CCWGG 1 cut(s) 226
BstNSI RCATGY 1 cut(s) 289
BstSCI CCNGG 1 cut(s) 224
BstV1I GCAGC 4 cut(s) 86, 316, 566, 627
BsuRI GGCC 4 cut(s) 39, 214, 371, 870
BtsCI GGATG 2 cut(s) 234, 946
BtsIMutI CAGTG 1 cut(s) 54
Cac8I GCNNGC 1 cut(s) 212
CfoI GCGC 1 cut(s) 861
Cfr13I GGNCC 3 cut(s) 213, 501, 869
CseI GACGC 1 cut(s) 1048
Csp6I GTAC 1 cut(s) 236
CviAII CATG 7 cut(s) 124, 286, 509, 587, 745, 862, 1185
CviQI GTAC 1 cut(s) 236
DdeI CTNAG 2 cut(s) 69, 339
DpnI GATC 3 cut(s) 271, 585, 973
DpnII GATC 3 cut(s) 269, 583, 971
EaeI YGGCCR 1 cut(s) 369
Eam1104I CTCTTC 3 cut(s) 164, 606, 903
EarI CTCTTC 3 cut(s) 164, 606, 903
Eco31I GGTCTC 1 cut(s) 1110
Eco47I GGWCC 1 cut(s) 501
Eco57I CTGAAG 1 cut(s) 62
EcoRII CCWGG 1 cut(s) 224
EcoT22I ATGCAT 1 cut(s) 634
FaeI CATG 7 cut(s) 127, 289, 512, 590, 748, 865, 1188
FatI CATG 7 cut(s) 123, 285, 508, 586, 744, 861, 1184
Fnu4HI GCNGC 6 cut(s) 75, 111, 256, 330, 555, 616
FokI GGATG 2 cut(s) 241, 953
Fsp4HI GCNGC 6 cut(s) 75, 111, 256, 330, 555, 616
FspAI RTGCGCAY 1 cut(s) 860
FspBI CTAG 2 cut(s) 132, 845
FspI TGCGCA 1 cut(s) 860
GlaI GCGC 1 cut(s) 860
GluI GCNGC 6 cut(s) 75, 111, 256, 330, 555, 616
HaeIII GGCC 4 cut(s) 39, 214, 371, 870
HapII CCGG 1 cut(s) 84
HgaI GACGC 1 cut(s) 1048
HhaI GCGC 1 cut(s) 861
Hin1II CATG 7 cut(s) 127, 289, 512, 590, 748, 865, 1188
Hin6I GCGC 1 cut(s) 859
HinP1I GCGC 1 cut(s) 859
HincII GTYRAC 3 cut(s) 91, 222, 514
HindII GTYRAC 3 cut(s) 91, 222, 514
HindIII AAGCTT 1 cut(s) 1057
HinfI GANTC 5 cut(s) 87, 346, 760, 789, 1082
HpaI GTTAAC 2 cut(s) 222, 514
HpaII CCGG 1 cut(s) 84
Hpy166II GTNNAC 4 cut(s) 91, 222, 504, 514
Hpy188I TCNGA 2 cut(s) 33, 574
Hpy188III TCNNGA 1 cut(s) 793
Hpy8I GTNNAC 4 cut(s) 91, 222, 504, 514
HpyAV CCTTC 2 cut(s) 88, 370
HpyCH4III ACNGT 2 cut(s) 723, 799
HpyCH4V TGCA 9 cut(s) 24, 289, 523, 632, 737, 744, 803, 952, 1079
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 80, 867, 1048
HpyF3I CTNAG 2 cut(s) 69, 339
Hsp92II CATG 7 cut(s) 127, 289, 512, 590, 748, 865, 1188
HspAI GCGC 1 cut(s) 859
KspAI GTTAAC 2 cut(s) 222, 514
Kzo9I GATC 3 cut(s) 269, 583, 971
LmnI GCTCC 2 cut(s) 405, 455
Lsp1109I GCAGC 4 cut(s) 86, 316, 566, 627
LweI GCATC 2 cut(s) 254, 961
MaeI CTAG 2 cut(s) 132, 845
MaeIII GTNAC 1 cut(s) 702
MalI GATC 3 cut(s) 271, 585, 973
MbiI CCGCTC 1 cut(s) 408
MboI GATC 3 cut(s) 269, 583, 971
MboII GAAGA 3 cut(s) 151, 593, 890
MluCI AATT 2 cut(s) 290, 770
MlyI GAGTC 2 cut(s) 96, 783
MmeI TCCRAC 2 cut(s) 366, 758
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 4 cut(s) 56, 221, 401, 513
MslI CAYNNNNRTG 3 cut(s) 250, 528, 1031
MspA1I CMGCKG 1 cut(s) 343
MspCI CTTAAG 1 cut(s) 400
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 1 cut(s) 226
Mva1269I GAATGC 1 cut(s) 632
MvaI CCWGG 1 cut(s) 226
MwoI GCNNNNNNNGC 4 cut(s) 74, 80, 867, 1048
NdeII GATC 3 cut(s) 269, 583, 971
NlaIII CATG 7 cut(s) 127, 289, 512, 590, 748, 865, 1188
NmuCI GTSAC 1 cut(s) 702
NsbI TGCGCA 1 cut(s) 860
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 1 cut(s) 289
OliI CACNNNNGTG 1 cut(s) 528
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 369
PctI GAATGC 1 cut(s) 632
PfeI GAWTC 3 cut(s) 346, 760, 1082
PflMI CCANNNNNTGG 1 cut(s) 550
PkrI GCNGC 6 cut(s) 76, 112, 257, 331, 556, 617
PleI GAGTC 2 cut(s) 95, 783
PpsI GAGTC 2 cut(s) 95, 783
PsiI TTATAA 2 cut(s) 477, 1100
Psp6I CCWGG 1 cut(s) 224
PspGI CCWGG 1 cut(s) 224
PspPI GGNCC 3 cut(s) 213, 501, 869
PvuII CAGCTG 1 cut(s) 343
RsaI GTAC 1 cut(s) 237
RsaNI GTAC 1 cut(s) 236
RseI CAYNNNNRTG 3 cut(s) 250, 528, 1031
SaqAI TTAA 4 cut(s) 56, 221, 401, 513
SatI GCNGC 6 cut(s) 75, 111, 256, 330, 555, 616
Sau3AI GATC 3 cut(s) 269, 583, 971
Sau96I GGNCC 3 cut(s) 213, 501, 869
ScaI AGTACT 1 cut(s) 237
SchI GAGTC 2 cut(s) 96, 783
ScrFI CCNGG 1 cut(s) 226
SfaNI GCATC 2 cut(s) 254, 961
SinI GGWCC 1 cut(s) 501
SmiMI CAYNNNNRTG 3 cut(s) 250, 528, 1031
SmlI CTYRAG 1 cut(s) 400
SmoI CTYRAG 1 cut(s) 400
SpeI ACTAGT 1 cut(s) 131
Sse9I AATT 2 cut(s) 290, 770
SsiI CCGC 4 cut(s) 111, 168, 255, 408
SspI AATATT 1 cut(s) 496
SspMI CTAG 2 cut(s) 132, 845
StyD4I CCNGG 1 cut(s) 224
TaaI ACNGT 2 cut(s) 723, 799
TaqI TCGA 2 cut(s) 716, 1062
TasI AATT 2 cut(s) 290, 770
TatI WGTACW 1 cut(s) 235
TauI GCSGC 2 cut(s) 113, 258
TfiI GAWTC 3 cut(s) 346, 760, 1082
Tru1I TTAA 4 cut(s) 56, 221, 401, 513
Tru9I TTAA 4 cut(s) 56, 221, 401, 513
TscAI CASTG 1 cut(s) 54
TseFI GTSAC 1 cut(s) 702
TseI GCWGC 4 cut(s) 74, 329, 554, 615
Tsp45I GTSAC 1 cut(s) 702
TspDTI ATGAA 3 cut(s) 140, 163, 878
TspRI CASTG 1 cut(s) 54
Van91I CCANNNNNTGG 1 cut(s) 550
Vha464I CTTAAG 1 cut(s) 400
VpaK11BI GGWCC 1 cut(s) 501
XceI RCATGY 1 cut(s) 289
XspI CTAG 2 cut(s) 132, 845
ZrmI AGTACT 1 cut(s) 237
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.