MD08G1224300.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
28914997 .. 28922569
7573 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1224300.v1.1.491

Sequence Viewer

Length: 1278 bp
ATGGCGATGGGTACTGGTAGGATATGTAATGCTCTGCATGGGTTGAAGCCAGTGTTGTTAATGGTGGTGGTTCAGTTTGCATTTGCAGGAGTTAATATTCTCTACAAACTGGCCGCTAACGATGGAATGAACTTAAGGATTCTTGTTGCATATCGCTTCATTTTTGGAACCGCCTTCCTTCTTCCTATTGCTCTTTTCATTGAAAGGAAGAACAGGCCAAAACTCACATGGATGGTACTCCTGCAAGGATTTTTGTCTGGCTTGTTCGGTGGATCGTTATCACAAAATTTGTACATTGAAAGCTTAGCCTTAACATCGGCCACATTTGCTTCTGCCATATCCCAACTCATCCCAGCTATTACCTTCATCTTGGCCATCACCTTCAGGCTGGAGAAATTGAATTTGAGAAGCCTAACAGGGAAGGCGAAGGTGTTGGGAACATTAATGGGAATAGGTGGAGCAATGCTTCTGGCCTTTTATGAGGGTGTGGAAATCAAAATATGGTCCACGCATGTTGACCTTTTACATACAAGTCAGCAACAACACAGCCACTTGGCATCATTACCGCATAGAGATTCTGGTGATCGACTATTGGGTTGTCTACTGGCCTTCGGAAGCTGTATTTGTAACGCTATATGGCTCATTATCCTGGTTTTCCAATTTCTACAGAGAAAGAGATGGAGAGACGATTGGGGGGGAAAGGAACAAGGTGGGTGTAGGGGAAAGACTAAAATGAGTGTGACATACCCTTGCTATTATTCAAGCACTGCTTTAATGTCAGCAATGGGGTCAATCCAGGCCGTTGGTTTTGCCCTCTGCATGGAGAGGGGGTGGAGCCAATGGATGCTAGGGTGGAACATTAGGCTTCTAACAGCGGCATACTCGGGAATTATGGTCACTGGGCTATGTGCTACATTTATTTCTTTGTGCATAAGCATGAGGGGCCCTTTGTTTGTATCTGTTTTCAACCCTCTTATGTTGGTGCTCATTGCCATCGTTGGGTCTTTGGTATTAGATGAGAAGTTGCATCTTGGAAGCGTTTTGGGAGCAGTGTTGATAGTGTGTGGCTTATATGCGGTGCTGTGGGGTAAGGGCAAAGAAATAGAGAAGATGAGTCATTTAGTACCGTCAACAAGCTTTCATCATCAGGATTCTGGCTCAATTGATATTGTGATAATGCCTCCAGATAACAATAAGGTCAACAGCAACAACATCGAGAGCCCTACAAATAACAATGCTTCAAAGGCTACTAGTTCTGCGGTCAGCATGATTCATTGA

Protein Analysis

426

Amino Acids

46.41

Weight (kDa)

9.36

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 17 - 157 2e-17 EamA-like transporter family
EamA PF00892 254 - 361 2.5e-06 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 601
AciI CCGC 6 cut(s) 114, 171, 566, 875, 1076, 1259
AclWI GGATC 1 cut(s) 280
AcoI YGGCCR 3 cut(s) 111, 318, 372
AcsI RAATTY 2 cut(s) 286, 400
AcuI CTGAAG 1 cut(s) 367
AfaI GTAC 4 cut(s) 13, 237, 293, 1125
AfiI CCNNNNNNNGG 2 cut(s) 820, 999
AflII CTTAAG 1 cut(s) 133
AgsI TTSAA 7 cut(s) 46, 203, 299, 400, 762, 967, 1242
AhlI ACTAGT 1 cut(s) 1250
AjnI CCWGG 2 cut(s) 648, 795
AluBI AGCT 4 cut(s) 303, 356, 618, 1137
AluI AGCT 4 cut(s) 303, 356, 618, 1137
Alw21I GWGCWC 1 cut(s) 987
Alw26I GTCTC 1 cut(s) 678
AlwI GGATC 1 cut(s) 280
Ama87I CYCGRG 1 cut(s) 883
AoxI GGCC 8 cut(s) 111, 215, 318, 372, 471, 606, 798, 943
ApaI GGGCCC 1 cut(s) 947
ApoI RAATTY 2 cut(s) 286, 400
AseI ATTAAT 1 cut(s) 443
AspS9I GGNCC 3 cut(s) 504, 943, 944
AsuHPI GGTGA 2 cut(s) 370, 593
AvaI CYCGRG 1 cut(s) 883
AvaII GGWCC 1 cut(s) 504
BaeGI GKGCMC 1 cut(s) 947
BalI TGGCCA 1 cut(s) 374
BanII GRGCYC 2 cut(s) 947, 1223
Bbv12I GWGCWC 1 cut(s) 987
BccI CCATC 5 cut(s) 116, 226, 383, 672, 1001
BceAI ACGGC 1 cut(s) 785
BcgI CGANNNNNNTGC 2 cut(s) 1195, 1229
BciT130I CCWGG 2 cut(s) 650, 797
BcoDI GTCTC 1 cut(s) 678
BcuI ACTAGT 1 cut(s) 1250
BfaI CTAG 2 cut(s) 848, 1251
BfmI CTRYAG 1 cut(s) 665
BfrI CTTAAG 1 cut(s) 133
BisI GCNGC 2 cut(s) 114, 876
BlpI GCTNAGC 1 cut(s) 304
BlsI GCNGC 2 cut(s) 115, 877
Bme1390I CCNGG 2 cut(s) 650, 797
Bme18I GGWCC 1 cut(s) 504
BmeT110I CYCGRG 1 cut(s) 883
BmgT120I GGNCC 3 cut(s) 504, 943, 944
BmiI GGNNCC 4 cut(s) 169, 836, 944, 945
BmrFI CCNGG 2 cut(s) 650, 797
BmrI ACTGGG 1 cut(s) 909
BmsI GCATC 3 cut(s) 566, 834, 1036
BmuI ACTGGG 1 cut(s) 909
BpmI CTGGAG 2 cut(s) 410, 1167
Bpu1102I GCTNAGC 1 cut(s) 304
BsaBI GATNNNNATC 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 815, 845
Bsc4I CCNNNNNNNGG 2 cut(s) 820, 999
Bse1I ACTGG 5 cut(s) 19, 50, 114, 609, 904
Bse3DI GCAATG 3 cut(s) 468, 789, 987
Bse8I GATNNNNATC 1 cut(s) 277
BseBI CCWGG 2 cut(s) 650, 797
BseGI GGATG 3 cut(s) 237, 348, 849
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 2 cut(s) 820, 999
BseMI GCAATG 3 cut(s) 468, 789, 987
BseNI ACTGG 5 cut(s) 19, 50, 114, 609, 904
BseSI GKGCMC 1 cut(s) 947
BseYI CCCAGC 1 cut(s) 352
BshFI GGCC 8 cut(s) 113, 217, 320, 374, 473, 608, 800, 945
BsiHKAI GWGCWC 1 cut(s) 987
BsiHKCI CYCGRG 1 cut(s) 883
BslI CCNNNNNNNGG 2 cut(s) 820, 999
BsmAI GTCTC 1 cut(s) 678
BsmBI CGTCTC 1 cut(s) 678
BsnI GGCC 8 cut(s) 113, 217, 320, 374, 473, 608, 800, 945
BsoBI CYCGRG 1 cut(s) 883
Bsp120I GGGCCC 1 cut(s) 943
Bsp1286I GDGCHC 3 cut(s) 947, 987, 1223
Bsp1407I TGTACA 1 cut(s) 291
Bsp143I GATC 2 cut(s) 272, 583
Bsp1720I GCTNAGC 1 cut(s) 304
BspACI CCGC 6 cut(s) 114, 171, 566, 875, 1076, 1259
BspANI GGCC 8 cut(s) 113, 217, 320, 374, 473, 608, 800, 945
BspLI GGNNCC 4 cut(s) 169, 836, 944, 945
BspPI GGATC 1 cut(s) 280
BspTI CTTAAG 1 cut(s) 133
BsrDI GCAATG 3 cut(s) 468, 789, 987
BsrGI TGTACA 1 cut(s) 291
BsrI ACTGG 5 cut(s) 19, 50, 114, 609, 904
BssMI GATC 2 cut(s) 272, 583
Bst2UI CCWGG 2 cut(s) 650, 797
Bst4CI ACNGT 1 cut(s) 1128
BstAFI CTTAAG 1 cut(s) 133
BstAUI TGTACA 1 cut(s) 291
BstDEI CTNAG 1 cut(s) 304
BstF5I GGATG 3 cut(s) 237, 348, 849
BstKTI GATC 2 cut(s) 275, 586
BstMAI GTCTC 1 cut(s) 678
BstMBI GATC 2 cut(s) 272, 583
BstMWI GCNNNNNNNGC 3 cut(s) 326, 942, 1244
BstNI CCWGG 2 cut(s) 650, 797
BstNSI RCATGY 1 cut(s) 515
BstSCI CCNGG 2 cut(s) 648, 795
BstSFI CTRYAG 1 cut(s) 665
BstSLI GKGCMC 1 cut(s) 947
BstXI CCANNNNNNTGG 1 cut(s) 803
BsuRI GGCC 8 cut(s) 113, 217, 320, 374, 473, 608, 800, 945
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 237, 348, 849
BtsI GCAGTG 2 cut(s) 765, 1056
BtsIMutI CAGTG 4 cut(s) 57, 765, 897, 1056
Cfr13I GGNCC 3 cut(s) 504, 943, 944
Csp6I GTAC 4 cut(s) 12, 236, 292, 1124
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 6 cut(s) 38, 228, 512, 820, 937, 1267
CviQI GTAC 4 cut(s) 12, 236, 292, 1124
DdeI CTNAG 1 cut(s) 304
DpnI GATC 2 cut(s) 274, 585
DpnII GATC 2 cut(s) 272, 583
EaeI YGGCCR 3 cut(s) 111, 318, 372
Eco24I GRGCYC 2 cut(s) 947, 1223
Eco47I GGWCC 1 cut(s) 504
Eco57I CTGAAG 1 cut(s) 367
Eco88I CYCGRG 1 cut(s) 883
EcoO109I RGGNCCY 2 cut(s) 943, 944
EcoRII CCWGG 2 cut(s) 648, 795
EcoT38I GRGCYC 2 cut(s) 947, 1223
Esp3I CGTCTC 1 cut(s) 678
FaeI CATG 6 cut(s) 41, 231, 515, 823, 940, 1270
FalI AAGNNNNNCTT 2 cut(s) 754, 786
FatI CATG 6 cut(s) 37, 227, 511, 819, 936, 1266
FblI GTMKAC 1 cut(s) 601
Fnu4HI GCNGC 2 cut(s) 114, 876
FokI GGATG 3 cut(s) 244, 335, 856
FriOI GRGCYC 2 cut(s) 947, 1223
Fsp4HI GCNGC 2 cut(s) 114, 876
FspBI CTAG 2 cut(s) 848, 1251
GluI GCNGC 2 cut(s) 114, 876
GsaI CCCAGC 1 cut(s) 356
GsuI CTGGAG 2 cut(s) 410, 1167
HaeIII GGCC 8 cut(s) 113, 217, 320, 374, 473, 608, 800, 945
Hin1II CATG 6 cut(s) 41, 231, 515, 823, 940, 1270
HincII GTYRAC 3 cut(s) 517, 1131, 1201
HindII GTYRAC 3 cut(s) 517, 1131, 1201
HindIII AAGCTT 2 cut(s) 301, 1135
HinfI GANTC 5 cut(s) 139, 575, 1114, 1151, 1270
HphI GGTGA 2 cut(s) 370, 593
Hpy166II GTNNAC 5 cut(s) 507, 517, 602, 1131, 1201
Hpy188I TCNGA 1 cut(s) 614
Hpy188III TCNNGA 4 cut(s) 885, 1148, 1184, 1216
Hpy8I GTNNAC 5 cut(s) 507, 517, 602, 1131, 1201
HpyAV CCTTC 7 cut(s) 184, 188, 373, 391, 415, 421, 619
HpyCH4III ACNGT 1 cut(s) 1128
HpyCH4V TGCA 8 cut(s) 37, 80, 86, 149, 244, 819, 930, 1027
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 942, 1244
HpyF3I CTNAG 1 cut(s) 304
Hsp92II CATG 6 cut(s) 41, 231, 515, 823, 940, 1270
Kzo9I GATC 2 cut(s) 272, 583
LmnI GCTCC 3 cut(s) 458, 834, 1046
LweI GCATC 3 cut(s) 566, 834, 1036
MaeI CTAG 2 cut(s) 848, 1251
MaeIII GTNAC 3 cut(s) 626, 739, 895
MalI GATC 2 cut(s) 274, 585
MboI GATC 2 cut(s) 272, 583
MboII GAAGA 3 cut(s) 173, 220, 1120
MfeI CAATTG 1 cut(s) 1161
MhlI GDGCHC 3 cut(s) 947, 987, 1223
MlsI TGGCCA 1 cut(s) 374
MluCI AATT 6 cut(s) 286, 395, 400, 659, 888, 1161
MluNI TGGCCA 1 cut(s) 374
MlyI GAGTC 1 cut(s) 1123
MnlI CCTC 6 cut(s) 475, 819, 824, 933, 981, 1191
Mox20I TGGCCA 1 cut(s) 374
MscI TGGCCA 1 cut(s) 374
MseI TTAA 6 cut(s) 59, 93, 134, 311, 443, 773
MslI CAYNNNNRTG 2 cut(s) 230, 935
Msp20I TGGCCA 1 cut(s) 374
MspA1I CMGCKG 1 cut(s) 875
MspCI CTTAAG 1 cut(s) 133
MspR9I CCNGG 2 cut(s) 650, 797
MunI CAATTG 1 cut(s) 1161
MvaI CCWGG 2 cut(s) 650, 797
MwoI GCNNNNNNNGC 3 cut(s) 326, 942, 1244
NdeII GATC 2 cut(s) 272, 583
NlaIII CATG 6 cut(s) 41, 231, 515, 823, 940, 1270
NlaIV GGNNCC 4 cut(s) 169, 836, 944, 945
NmuCI GTSAC 2 cut(s) 739, 895
NspI RCATGY 1 cut(s) 515
PfeI GAWTC 4 cut(s) 139, 575, 1151, 1270
PkrI GCNGC 2 cut(s) 115, 877
PleI GAGTC 1 cut(s) 1122
PpsI GAGTC 1 cut(s) 1122
PshBI ATTAAT 1 cut(s) 443
Psp6I CCWGG 2 cut(s) 648, 795
PspFI CCCAGC 1 cut(s) 352
PspGI CCWGG 2 cut(s) 648, 795
PspN4I GGNNCC 4 cut(s) 169, 836, 944, 945
PspOMI GGGCCC 1 cut(s) 943
PspPI GGNCC 3 cut(s) 504, 943, 944
RsaI GTAC 4 cut(s) 13, 237, 293, 1125
RsaNI GTAC 4 cut(s) 12, 236, 292, 1124
RseI CAYNNNNRTG 2 cut(s) 230, 935
SaqAI TTAA 6 cut(s) 59, 93, 134, 311, 443, 773
SatI GCNGC 2 cut(s) 114, 876
Sau3AI GATC 2 cut(s) 272, 583
Sau96I GGNCC 3 cut(s) 504, 943, 944
SchI GAGTC 1 cut(s) 1123
ScrFI CCNGG 2 cut(s) 650, 797
SduI GDGCHC 3 cut(s) 947, 987, 1223
SfaNI GCATC 3 cut(s) 566, 834, 1036
SfcI CTRYAG 1 cut(s) 665
SinI GGWCC 1 cut(s) 504
SmiMI CAYNNNNRTG 2 cut(s) 230, 935
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
SpeI ACTAGT 1 cut(s) 1250
Sse9I AATT 6 cut(s) 286, 395, 400, 659, 888, 1161
SsiI CCGC 6 cut(s) 114, 171, 566, 875, 1076, 1259
SspI AATATT 1 cut(s) 97
SspMI CTAG 2 cut(s) 848, 1251
StyD4I CCNGG 2 cut(s) 648, 795
TaaI ACNGT 1 cut(s) 1128
TaqI TCGA 2 cut(s) 586, 1215
TasI AATT 6 cut(s) 286, 395, 400, 659, 888, 1161
TatI WGTACW 1 cut(s) 291
TauI GCSGC 2 cut(s) 116, 878
TfiI GAWTC 4 cut(s) 139, 575, 1151, 1270
Tru1I TTAA 6 cut(s) 59, 93, 134, 311, 443, 773
Tru9I TTAA 6 cut(s) 59, 93, 134, 311, 443, 773
TscAI CASTG 4 cut(s) 57, 772, 904, 1056
TseFI GTSAC 2 cut(s) 739, 895
Tsp45I GTSAC 2 cut(s) 739, 895
TspDTI ATGAA 6 cut(s) 143, 148, 187, 355, 1130, 1262
TspRI CASTG 4 cut(s) 57, 772, 904, 1056
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 504
VspI ATTAAT 1 cut(s) 443
XapI RAATTY 2 cut(s) 286, 400
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 225
XmiI GTMKAC 1 cut(s) 601
XspI CTAG 2 cut(s) 848, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.