FvH4_5g30371

WAT1-related protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
21257943 .. 21261339
3397 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g30371.t1

Sequence Viewer

Length: 1164 bp
ATGGGGAGTGGTAGTTGTTTTAATGCTTTGCATGGGCTGAAGCCATTGATGCTAATGCTGGTGGTTCAGTTTACATCTGTTGGAGTGAACTTGTTCTACAAACTGGCCGCTAATGATGGAATGGACATCAGGCTTATTATTGCCTATCGCTTCACTTTTGCCACCGTTTTCCTTGCTCCTATTGCCTTCTTCGTTGAAAGAAAGAGCAGGCCAAAGCTCACTCGGGCGGTACTCCTCCAATCATTTTTTTCTGGCTTGTTTGGAGGAGCATTGTCACAAAATTTGTACATTGCAAGTTTATCGTTAACATCTCCAACATTTGCTTCCGCCATCACTCAACTCATCCCCGCCATTACTTTTGCTTTAGCCGTCTCCTTTGGGTTGGAGAGATTGAATTTAAGGAGCGTAGGAGGGATGGCAAAGGTGTTGGGAACATCAATGGGAATAGGTGGAGCAATGCTTATGACATTTTACAGAGGTGTGGCGATCGACTTATGGACCACCCATGTTGACCTTGTGCATGGTAGTGATCAGCAACAACCACACTTGGAAGCAGCAGCAGCAGCTTCGCATGATGAGTTTGCTCATCGAGTCTTGGGTTGTCTTCTGGCTCTCGCCAGCTCCTTTGGCTGGGCCTTGTGGCTAATTATTCAGGCTAAGATGGGTGAGAAATACCCTAGTTATTATTCAAGCGCAGCTCTACTGTCGTTTATGGCGGCAATCCAGTCCCTTGGTTTTGCTCTCTGCGTCGACAGGGACTGGAACCATTGGAAGTTAGGTTGGAATATTAGACTTCTAACAGTCCTATACCTGGGGATTGTGGGTACTGGAGTAAGTGTGACCTGTACTACACTTTGCATAAGCATGAGAGGGCCTCTGTATGCGTCAGTTTTCGGGCCTCTGGTTCTTGTTCTTGTTGCCCTGGTCGGCACTTTGGTGTTGGAAGAGAAGTTACACCTCGGAAGTGTGCTTGGAGCGGTGTTAATCATTGGTGGCTTATACGGTGTGCTGTGGGGAAAGAGCAAAGACATAAAGAAGATGAATCAATCGGTGCCAACAACAAGCAGCTTTGAGGATCAGGAATCTGTAGTTGAAATTGTCTCACTGCCTCCGGATAATAATAAAGGCAATAACAACATGAATGAGACGGTCGGTCACAAATAG

Protein Analysis

388

Amino Acids

41.75

Weight (kDa)

8.89

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 16 - 143 7.7e-15 EamA-like transporter family
EamA PF00892 199 - 337 1.3e-14 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1051
AccBSI CCGCTC 1 cut(s) 977
AccI GTMKAC 1 cut(s) 750
AccIII TCCGGA 1 cut(s) 1111
AciI CCGC 6 cut(s) 108, 227, 327, 348, 716, 977
AclWI GGATC 1 cut(s) 1083
AcoI YGGCCR 1 cut(s) 105
AcsI RAATTY 2 cut(s) 280, 394
AcuI CTGAAG 1 cut(s) 59
AfaI GTAC 4 cut(s) 231, 287, 826, 847
AfiI CCNNNNNNNGG 2 cut(s) 630, 811
AgsI TTSAA 4 cut(s) 197, 394, 690, 1094
AhdI GACNNNNNGTC 1 cut(s) 1152
AjnI CCWGG 2 cut(s) 810, 921
AjuI GAANNNNNNNTTGG 2 cut(s) 307, 339
AleI CACNNNNGTG 1 cut(s) 935
AluBI AGCT 5 cut(s) 217, 566, 621, 698, 1068
AluI AGCT 5 cut(s) 217, 566, 621, 698, 1068
Alw26I GTCTC 3 cut(s) 376, 1105, 1139
AlwI GGATC 1 cut(s) 1083
AlwNI CAGNNNCTG 1 cut(s) 759
Ama87I CYCGRG 1 cut(s) 222
Aor13HI TCCGGA 1 cut(s) 1111
AoxI GGCC 5 cut(s) 105, 209, 633, 872, 896
ApeKI GCWGC 6 cut(s) 554, 557, 560, 563, 695, 1065
ApoI RAATTY 2 cut(s) 280, 394
Asp700I GAANNNNTTC 1 cut(s) 92
AspLEI GCGC 1 cut(s) 695
AspS9I GGNCC 4 cut(s) 498, 633, 872, 896
AsuHPI GGTGA 1 cut(s) 677
AvaI CYCGRG 1 cut(s) 222
AvaII GGWCC 1 cut(s) 498
BaeI ACNNNNGTAYC 2 cut(s) 816, 849
BanI GGYRCC 1 cut(s) 1051
BarI GAAGNNNNNNTAC 2 cut(s) 936, 968
BbsI GAAGAC 1 cut(s) 596
BbvI GCAGC 6 cut(s) 566, 569, 572, 575, 707, 1077
BccI CCATC 4 cut(s) 110, 338, 409, 655
BceAI ACGGC 1 cut(s) 353
BcgI CGANNNNNNTGC 4 cut(s) 282, 316, 549, 583
BciT130I CCWGG 2 cut(s) 812, 923
BclI TGATCA 1 cut(s) 529
BcoDI GTCTC 3 cut(s) 376, 1105, 1139
BfaI CTAG 1 cut(s) 678
BfmI CTRYAG 1 cut(s) 1086
BisI GCNGC 8 cut(s) 108, 555, 558, 561, 564, 696, 717, 1066
BlsI GCNGC 8 cut(s) 109, 556, 559, 562, 565, 697, 718, 1067
Bme1390I CCNGG 2 cut(s) 812, 923
Bme18I GGWCC 1 cut(s) 498
BmeRI GACNNNNNGTC 1 cut(s) 1152
BmeT110I CYCGRG 1 cut(s) 222
BmgT120I GGNCC 4 cut(s) 498, 633, 872, 896
BmiI GGNNCC 2 cut(s) 764, 1053
BmrFI CCNGG 2 cut(s) 812, 923
BmsI GCATC 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 596
BplI GAGNNNNNCTC 2 cut(s) 859, 891
BpmI CTGGAG 1 cut(s) 849
BsaJI CCNNGG 4 cut(s) 730, 811, 921, 958
BsaWI WCCGGW 1 cut(s) 1111
BsaXI ACNNNNNCTCC 3 cut(s) 28, 822, 852
Bsc4I CCNNNNNNNGG 2 cut(s) 630, 811
Bse1I ACTGG 4 cut(s) 108, 724, 764, 832
Bse3DI GCAATG 2 cut(s) 288, 462
BseAI TCCGGA 1 cut(s) 1111
BseBI CCWGG 2 cut(s) 812, 923
BseDI CCNNGG 4 cut(s) 730, 811, 921, 958
BseGI GGATG 2 cut(s) 342, 420
BseLI CCNNNNNNNGG 2 cut(s) 630, 811
BseMI GCAATG 2 cut(s) 288, 462
BseNI ACTGG 4 cut(s) 108, 724, 764, 832
BseRI GAGGAG 2 cut(s) 224, 279
BseXI GCAGC 6 cut(s) 566, 569, 572, 575, 707, 1077
BseYI CCCAGC 1 cut(s) 630
Bsh1285I CGRYCG 2 cut(s) 489, 1152
BshFI GGCC 5 cut(s) 107, 211, 635, 874, 898
BshNI GGYRCC 1 cut(s) 1051
BsiEI CGRYCG 2 cut(s) 489, 1152
BsiHKCI CYCGRG 1 cut(s) 222
BsiSI CCGG 1 cut(s) 1112
BslFI GGGAC 2 cut(s) 712, 770
BslI CCNNNNNNNGG 2 cut(s) 630, 811
BsmAI GTCTC 3 cut(s) 376, 1105, 1139
BsmBI CGTCTC 2 cut(s) 376, 1139
BsmFI GGGAC 2 cut(s) 712, 770
BsnI GGCC 5 cut(s) 107, 211, 635, 874, 898
BsoBI CYCGRG 1 cut(s) 222
Bsp13I TCCGGA 1 cut(s) 1111
Bsp1407I TGTACA 1 cut(s) 285
Bsp143I GATC 3 cut(s) 486, 529, 1075
BspACI CCGC 6 cut(s) 108, 227, 327, 348, 716, 977
BspANI GGCC 5 cut(s) 107, 211, 635, 874, 898
BspEI TCCGGA 1 cut(s) 1111
BspLI GGNNCC 2 cut(s) 764, 1053
BspPI GGATC 1 cut(s) 1083
BspT107I GGYRCC 1 cut(s) 1051
BsrBI CCGCTC 1 cut(s) 977
BsrDI GCAATG 2 cut(s) 288, 462
BsrGI TGTACA 1 cut(s) 285
BsrI ACTGG 4 cut(s) 108, 724, 764, 832
BssECI CCNNGG 4 cut(s) 730, 811, 921, 958
BssMI GATC 3 cut(s) 486, 529, 1075
BssT1I CCWWGG 1 cut(s) 730
Bst2UI CCWGG 2 cut(s) 812, 923
Bst4CI ACNGT 5 cut(s) 166, 705, 802, 1004, 1150
Bst6I CTCTTC 1 cut(s) 939
BstAUI TGTACA 1 cut(s) 285
BstC8I GCNNGC 2 cut(s) 209, 619
BstDEI CTNAG 1 cut(s) 657
BstF5I GGATG 2 cut(s) 342, 420
BstHHI GCGC 1 cut(s) 695
BstKTI GATC 3 cut(s) 489, 532, 1078
BstMAI GTCTC 3 cut(s) 376, 1105, 1139
BstMBI GATC 3 cut(s) 486, 529, 1075
BstMCI CGRYCG 2 cut(s) 489, 1152
BstMWI GCNNNNNNNGC 5 cut(s) 49, 182, 560, 563, 627
BstNI CCWGG 2 cut(s) 812, 923
BstSCI CCNGG 2 cut(s) 810, 921
BstSFI CTRYAG 1 cut(s) 1086
BstV1I GCAGC 6 cut(s) 566, 569, 572, 575, 707, 1077
BstV2I GAAGAC 1 cut(s) 596
BstXI CCANNNNNNTGG 1 cut(s) 731
BsuRI GGCC 5 cut(s) 107, 211, 635, 874, 898
BtsCI GGATG 2 cut(s) 342, 420
BtsI GCAGTG 1 cut(s) 1103
BtsIMutI CAGTG 1 cut(s) 1103
Cac8I GCNNGC 2 cut(s) 209, 619
CaiI CAGNNNCTG 1 cut(s) 759
CfoI GCGC 1 cut(s) 695
Cfr13I GGNCC 4 cut(s) 498, 633, 872, 896
CseI GACGC 2 cut(s) 736, 873
Csp6I GTAC 4 cut(s) 230, 286, 825, 846
CspCI CAANNNNNGTGG 2 cut(s) 490, 525
CviAII CATG 6 cut(s) 32, 506, 521, 572, 865, 1138
CviQI GTAC 4 cut(s) 230, 286, 825, 846
DdeI CTNAG 1 cut(s) 657
DpnI GATC 3 cut(s) 488, 531, 1077
DpnII GATC 3 cut(s) 486, 529, 1075
DriI GACNNNNNGTC 1 cut(s) 1152
EaeI YGGCCR 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 939
Eam1105I GACNNNNNGTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 939
EciI GGCGGA 1 cut(s) 316
Eco130I CCWWGG 1 cut(s) 730
Eco47I GGWCC 1 cut(s) 498
Eco57I CTGAAG 1 cut(s) 59
Eco88I CYCGRG 1 cut(s) 222
EcoO109I RGGNCCY 1 cut(s) 872
EcoRII CCWGG 2 cut(s) 810, 921
EcoT14I CCWWGG 1 cut(s) 730
ErhI CCWWGG 1 cut(s) 730
Esp3I CGTCTC 2 cut(s) 376, 1139
FaeI CATG 6 cut(s) 35, 509, 524, 575, 868, 1141
FaqI GGGAC 2 cut(s) 712, 770
FatI CATG 6 cut(s) 31, 505, 520, 571, 864, 1137
FauI CCCGC 1 cut(s) 355
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 1 cut(s) 750
Fnu4HI GCNGC 8 cut(s) 108, 555, 558, 561, 564, 696, 717, 1066
FokI GGATG 2 cut(s) 329, 427
Fsp4HI GCNGC 8 cut(s) 108, 555, 558, 561, 564, 696, 717, 1066
FspBI CTAG 1 cut(s) 678
GlaI GCGC 1 cut(s) 694
GluI GCNGC 8 cut(s) 108, 555, 558, 561, 564, 696, 717, 1066
GsaI CCCAGC 1 cut(s) 634
GsuI CTGGAG 1 cut(s) 849
HaeIII GGCC 5 cut(s) 107, 211, 635, 874, 898
HapII CCGG 1 cut(s) 1112
HgaI GACGC 2 cut(s) 736, 873
HhaI GCGC 1 cut(s) 695
Hin1II CATG 6 cut(s) 35, 509, 524, 575, 868, 1141
Hin6I GCGC 1 cut(s) 693
HinP1I GCGC 1 cut(s) 693
HincII GTYRAC 3 cut(s) 306, 511, 751
HindII GTYRAC 3 cut(s) 306, 511, 751
HinfI GANTC 3 cut(s) 591, 1042, 1082
HpaI GTTAAC 1 cut(s) 306
HpaII CCGG 1 cut(s) 1112
HphI GGTGA 1 cut(s) 677
Hpy166II GTNNAC 5 cut(s) 72, 88, 306, 511, 751
Hpy188I TCNGA 1 cut(s) 962
Hpy188III TCNNGA 2 cut(s) 1079, 1112
Hpy8I GTNNAC 5 cut(s) 72, 88, 306, 511, 751
Hpy99I CGWCG 1 cut(s) 752
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 5 cut(s) 166, 705, 802, 1004, 1150
HpyCH4V TGCA 4 cut(s) 31, 293, 520, 858
HpyF10VI GCNNNNNNNGC 5 cut(s) 49, 182, 560, 563, 627
HpyF3I CTNAG 1 cut(s) 657
Hsp92II CATG 6 cut(s) 35, 509, 524, 575, 868, 1141
HspAI GCGC 1 cut(s) 693
Kpn2I TCCGGA 1 cut(s) 1111
Ksp22I TGATCA 1 cut(s) 529
KspAI GTTAAC 1 cut(s) 306
Kzo9I GATC 3 cut(s) 486, 529, 1075
LmnI GCTCC 6 cut(s) 181, 266, 402, 452, 626, 974
Lsp1109I GCAGC 6 cut(s) 566, 569, 572, 575, 707, 1077
LweI GCATC 1 cut(s) 39
MaeI CTAG 1 cut(s) 678
MaeIII GTNAC 4 cut(s) 273, 838, 951, 1154
MalI GATC 3 cut(s) 488, 531, 1077
MbiI CCGCTC 1 cut(s) 977
MboI GATC 3 cut(s) 486, 529, 1075
MboII GAAGA 4 cut(s) 181, 596, 956, 1048
MluCI AATT 4 cut(s) 280, 394, 645, 1095
MlyI GAGTC 1 cut(s) 600
MmeI TCCRAC 5 cut(s) 61, 338, 363, 761, 921
MroI TCCGGA 1 cut(s) 1111
MroXI GAANNNNTTC 1 cut(s) 92
MseI TTAA 4 cut(s) 21, 305, 398, 983
MslI CAYNNNNRTG 3 cut(s) 525, 863, 935
MspI CCGG 1 cut(s) 1112
MspR9I CCNGG 2 cut(s) 812, 923
MvaI CCWGG 2 cut(s) 812, 923
MwoI GCNNNNNNNGC 5 cut(s) 49, 182, 560, 563, 627
NdeII GATC 3 cut(s) 486, 529, 1075
NlaIII CATG 6 cut(s) 35, 509, 524, 575, 868, 1141
NlaIV GGNNCC 2 cut(s) 764, 1053
NmuCI GTSAC 3 cut(s) 273, 838, 1154
OliI CACNNNNGTG 1 cut(s) 935
PdmI GAANNNNTTC 1 cut(s) 92
PfeI GAWTC 2 cut(s) 1042, 1082
PkrI GCNGC 8 cut(s) 109, 556, 559, 562, 565, 697, 718, 1067
Ple19I CGATCG 1 cut(s) 489
PleI GAGTC 1 cut(s) 599
PpsI GAGTC 1 cut(s) 599
Psp6I CCWGG 2 cut(s) 810, 921
PspFI CCCAGC 1 cut(s) 630
PspGI CCWGG 2 cut(s) 810, 921
PspN4I GGNNCC 2 cut(s) 764, 1053
PspPI GGNCC 4 cut(s) 498, 633, 872, 896
PsrI GAACNNNNNNTAC 2 cut(s) 80, 112
PstNI CAGNNNCTG 1 cut(s) 759
PvuI CGATCG 1 cut(s) 489
RsaI GTAC 4 cut(s) 231, 287, 826, 847
RsaNI GTAC 4 cut(s) 230, 286, 825, 846
RseI CAYNNNNRTG 3 cut(s) 525, 863, 935
SalI GTCGAC 1 cut(s) 749
SaqAI TTAA 4 cut(s) 21, 305, 398, 983
SatI GCNGC 8 cut(s) 108, 555, 558, 561, 564, 696, 717, 1066
Sau3AI GATC 3 cut(s) 486, 529, 1075
Sau96I GGNCC 4 cut(s) 498, 633, 872, 896
SchI GAGTC 1 cut(s) 600
ScrFI CCNGG 2 cut(s) 812, 923
SfaNI GCATC 1 cut(s) 39
SfcI CTRYAG 1 cut(s) 1086
SinI GGWCC 1 cut(s) 498
SmiMI CAYNNNNRTG 3 cut(s) 525, 863, 935
Sse9I AATT 4 cut(s) 280, 394, 645, 1095
SsiI CCGC 6 cut(s) 108, 227, 327, 348, 716, 977
SspI AATATT 1 cut(s) 787
SspMI CTAG 1 cut(s) 678
StyD4I CCNGG 2 cut(s) 810, 921
StyI CCWWGG 1 cut(s) 730
TaaI ACNGT 5 cut(s) 166, 705, 802, 1004, 1150
TaqI TCGA 3 cut(s) 489, 589, 750
TaqII GACCGA 1 cut(s) 1142
TasI AATT 4 cut(s) 280, 394, 645, 1095
TatI WGTACW 2 cut(s) 285, 845
TauI GCSGC 2 cut(s) 110, 719
TfiI GAWTC 2 cut(s) 1042, 1082
Tru1I TTAA 4 cut(s) 21, 305, 398, 983
Tru9I TTAA 4 cut(s) 21, 305, 398, 983
TscAI CASTG 1 cut(s) 1110
TseFI GTSAC 3 cut(s) 273, 838, 1154
TseI GCWGC 6 cut(s) 554, 557, 560, 563, 695, 1065
Tsp45I GTSAC 3 cut(s) 273, 838, 1154
TspDTI ATGAA 2 cut(s) 1055, 1154
TspRI CASTG 1 cut(s) 1110
VpaK11BI GGWCC 1 cut(s) 498
XapI RAATTY 2 cut(s) 280, 394
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 1 cut(s) 92
XspI CTAG 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.