MD17G1230500.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
27841134 .. 27843350
2217 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1230500.v1.1.491

Sequence Viewer

Length: 1191 bp
ATGGGGCAGAAACAGATGTGTTGTAGTACCAGTATAGTACAAGGGTTGAAGCCAGTGCTGATGATGTTGGTGGTTCAGACGGCATATACAGGGATGAATATATTTTACAAACTGGTAGCGGAAGTTGGCATGAGTTTAACTGTTCTCGTTGCCTACCGTAACATGTTTTCTGCAGCCCTTATGCTTCCTCTTGCTCTTATATGTGAAAGGAAGAGCAGGCCCAAACTTACCTTAGATATACTGCTTCAAGGTTTTCTCTCCGGATTATTGGGGGCAACAATGGCACAAAATTTTTACATAGAGAGCTTAGCCTTAACATCAACAACATATGTTGCAGCCTGCAATAATCTTGTTCCAGTAATCACCCTCATTATAGCAGTATGTTTTAGGCTGGAGAGCTTAGCACTTGGAACACATGCAGGAAGGGCAAAGGTTGTGGGGACACTAGTGTGTATAGGAGGGACCATGCTCTTCACGTTCTACAAAGGAAAACCTATTGCCATGTGGTCAACACACTTTAACCTTTTACGTAACTGTTTGCATGAAAGCAGCCACGTGGCATCACTGCATAAAAACACTCACACTCAGTTGTTGGGCTCCTTTCTAGCACTCTGCAGTAGCACCTCATTTGCGTGTTGGTTGATATTTCAGACGAAAATGACGAAGAGATACCCTTGCCATTACTCAAGCACAGCTCTAATGTCTCTCATGGCATCAATTCAGTCTGTAGTATTTGCGCTTTGCAAGGAGAGGGATTGGAATCAATGGAAGTTGGGTTGGGATATCAGACTTCTTGCTGCTCTGTATACGGGAGTGGTCACGACTGGACTCGTAGTGACTCTAACTGCATGGTGCGTACGAATGCGAGGGCCGTTGTTTGTGTCAGTTTTCAACCCACTTTGCCTTTTGCTGATAGCCTTTGCTGCGCCTTTGTTGCTGAATGAAAAATTATACCTAGGAAGCATATTAGGAGGGCTTCTAGTTGTATGTGGATTATACACGGTGCTTTGGGGTAAAAGCAAGGAAATGAAGATGATGACTCAATTGCCACAACCACCACTTCAAGATCAGCACTCCCATTCCATTGACATGGCAACATCTTCAGTTCACACTACTACTTGCGATAGCAATGCACAACCAATGTCAAATGCTCCAATGAACAATGGACTCAAAGAAAACATTGAGCATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

397

Amino Acids

43.57

Weight (kDa)

9.13

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 18 - 159 4.7e-12 EamA-like transporter family
EamA PF00892 198 - 336 1.1e-12 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 806
AccIII TCCGGA 1 cut(s) 260
AciI CCGC 1 cut(s) 119
AcsI RAATTY 1 cut(s) 289
AcuI CTGAAG 1 cut(s) 1086
AcvI CACGTG 1 cut(s) 556
AfaI GTAC 3 cut(s) 28, 39, 858
AflIII ACRYGT 1 cut(s) 162
AgsI TTSAA 4 cut(s) 49, 248, 892, 1064
AhlI ACTAGT 1 cut(s) 445
AleI CACNNNNGTG 1 cut(s) 448
AluBI AGCT 3 cut(s) 306, 399, 695
AluI AGCT 3 cut(s) 306, 399, 695
Alw26I GTCTC 1 cut(s) 708
Aor13HI TCCGGA 1 cut(s) 260
AoxI GGCC 2 cut(s) 218, 869
ApeKI GCWGC 5 cut(s) 173, 335, 549, 797, 923
ApoI RAATTY 1 cut(s) 289
AspA2I CCTAGG 1 cut(s) 955
AspLEI GCGC 2 cut(s) 739, 928
AspS9I GGNCC 3 cut(s) 219, 462, 869
AsuHPI GGTGA 1 cut(s) 355
AvaII GGWCC 1 cut(s) 462
AvrII CCTAGG 1 cut(s) 955
BanII GRGCYC 1 cut(s) 599
BbrPI CACGTG 1 cut(s) 556
BbvI GCAGC 5 cut(s) 185, 347, 561, 784, 910
BceAI ACGGC 2 cut(s) 96, 856
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BcoDI GTCTC 1 cut(s) 708
BcuI ACTAGT 1 cut(s) 445
BfaI CTAG 4 cut(s) 446, 605, 956, 980
BfmI CTRYAG 3 cut(s) 171, 613, 726
BisI GCNGC 5 cut(s) 174, 336, 550, 798, 924
BlnI CCTAGG 1 cut(s) 955
BlpI GCTNAGC 2 cut(s) 307, 400
BlsI GCNGC 5 cut(s) 175, 337, 551, 799, 925
Bme18I GGWCC 1 cut(s) 462
BmgT120I GGNCC 3 cut(s) 219, 462, 869
BmiI GGNNCC 2 cut(s) 463, 598
BmsI GCATC 2 cut(s) 569, 722
BpmI CTGGAG 1 cut(s) 413
Bpu1102I GCTNAGC 2 cut(s) 307, 400
BpuEI CTTGAG 1 cut(s) 670
BsaAI YACGTR 2 cut(s) 530, 556
BsaBI GATNNNNATC 1 cut(s) 759
BsaJI CCNNGG 1 cut(s) 955
BsaWI WCCGGW 1 cut(s) 260
Bse1I ACTGG 5 cut(s) 30, 53, 117, 356, 829
Bse3DI GCAATG 1 cut(s) 1135
Bse8I GATNNNNATC 1 cut(s) 759
BseAI TCCGGA 1 cut(s) 260
BseDI CCNNGG 1 cut(s) 955
BseGI GGATG 1 cut(s) 99
BseJI GATNNNNATC 1 cut(s) 759
BseMI GCAATG 1 cut(s) 1135
BseMII CTCAG 1 cut(s) 599
BseNI ACTGG 5 cut(s) 30, 53, 117, 356, 829
BseXI GCAGC 5 cut(s) 185, 347, 561, 784, 910
BshFI GGCC 2 cut(s) 220, 871
BsiSI CCGG 1 cut(s) 261
BsiWI CGTACG 1 cut(s) 856
BslFI GGGAC 2 cut(s) 454, 475
BsmAI GTCTC 1 cut(s) 708
BsmFI GGGAC 2 cut(s) 454, 475
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 2 cut(s) 220, 871
Bsp1286I GDGCHC 1 cut(s) 599
Bsp13I TCCGGA 1 cut(s) 260
Bsp143I GATC 1 cut(s) 1066
Bsp1720I GCTNAGC 2 cut(s) 307, 400
BspACI CCGC 1 cut(s) 119
BspANI GGCC 2 cut(s) 220, 871
BspCNI CTCAG 1 cut(s) 598
BspEI TCCGGA 1 cut(s) 260
BspLI GGNNCC 2 cut(s) 463, 598
BspMAI CTGCAG 2 cut(s) 175, 617
BspQI GCTCTTC 2 cut(s) 206, 476
BsrDI GCAATG 1 cut(s) 1135
BsrI ACTGG 5 cut(s) 30, 53, 117, 356, 829
BssECI CCNNGG 1 cut(s) 955
BssMI GATC 1 cut(s) 1066
BssNAI GTATAC 1 cut(s) 807
BssT1I CCWWGG 1 cut(s) 955
Bst1107I GTATAC 1 cut(s) 807
Bst4CI ACNGT 4 cut(s) 142, 158, 536, 1003
Bst6I CTCTTC 3 cut(s) 206, 476, 659
BstBAI YACGTR 2 cut(s) 530, 556
BstC8I GCNNGC 2 cut(s) 218, 340
BstDEI CTNAG 4 cut(s) 232, 307, 400, 585
BstF5I GGATG 1 cut(s) 99
BstHHI GCGC 2 cut(s) 739, 928
BstKTI GATC 1 cut(s) 1069
BstMAI GTCTC 1 cut(s) 708
BstMBI GATC 1 cut(s) 1066
BstMWI GCNNNNNNNGC 4 cut(s) 281, 425, 923, 934
BstNSI RCATGY 2 cut(s) 166, 419
BstSFI CTRYAG 3 cut(s) 171, 613, 726
BstSNI TACGTA 1 cut(s) 530
BstV1I GCAGC 5 cut(s) 185, 347, 561, 784, 910
BstXI CCANNNNNNTGG 1 cut(s) 1090
BstZ17I GTATAC 1 cut(s) 807
BsuRI GGCC 2 cut(s) 220, 871
BtsCI GGATG 1 cut(s) 99
BtsI GCAGTG 1 cut(s) 563
BtsIMutI CAGTG 2 cut(s) 60, 563
Cac8I GCNNGC 2 cut(s) 218, 340
CfoI GCGC 2 cut(s) 739, 928
Cfr13I GGNCC 3 cut(s) 219, 462, 869
Csp6I GTAC 3 cut(s) 27, 38, 857
CspCI CAANNNNNGTGG 2 cut(s) 417, 452
CviAII CATG 9 cut(s) 130, 163, 416, 466, 502, 542, 709, 849, 1090
CviQI GTAC 3 cut(s) 27, 38, 857
DdeI CTNAG 4 cut(s) 232, 307, 400, 585
DpnI GATC 1 cut(s) 1068
DpnII GATC 1 cut(s) 1066
Eam1104I CTCTTC 3 cut(s) 206, 476, 659
EarI CTCTTC 3 cut(s) 206, 476, 659
Eco105I TACGTA 1 cut(s) 530
Eco130I CCWWGG 1 cut(s) 955
Eco24I GRGCYC 1 cut(s) 599
Eco32I GATATC 1 cut(s) 784
Eco47I GGWCC 1 cut(s) 462
Eco57I CTGAAG 1 cut(s) 1086
Eco72I CACGTG 1 cut(s) 556
EcoRV GATATC 1 cut(s) 784
EcoT14I CCWWGG 1 cut(s) 955
EcoT38I GRGCYC 1 cut(s) 599
ErhI CCWWGG 1 cut(s) 955
FaeI CATG 9 cut(s) 133, 166, 419, 469, 505, 545, 712, 852, 1093
FaqI GGGAC 2 cut(s) 454, 475
FatI CATG 9 cut(s) 129, 162, 415, 465, 501, 541, 708, 848, 1089
FauNDI CATATG 1 cut(s) 328
FblI GTMKAC 1 cut(s) 806
Fnu4HI GCNGC 5 cut(s) 174, 336, 550, 798, 924
FokI GGATG 1 cut(s) 106
FriOI GRGCYC 1 cut(s) 599
Fsp4HI GCNGC 5 cut(s) 174, 336, 550, 798, 924
FspBI CTAG 4 cut(s) 446, 605, 956, 980
GlaI GCGC 2 cut(s) 738, 927
GluI GCNGC 5 cut(s) 174, 336, 550, 798, 924
GsuI CTGGAG 1 cut(s) 413
HaeIII GGCC 2 cut(s) 220, 871
HapII CCGG 1 cut(s) 261
HhaI GCGC 2 cut(s) 739, 928
Hin1II CATG 9 cut(s) 133, 166, 419, 469, 505, 545, 712, 852, 1093
Hin6I GCGC 2 cut(s) 737, 926
HinP1I GCGC 2 cut(s) 737, 926
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HinfI GANTC 5 cut(s) 760, 828, 838, 1039, 1167
HpaII CCGG 1 cut(s) 261
HphI GGTGA 1 cut(s) 355
Hpy166II GTNNAC 3 cut(s) 510, 807, 1108
Hpy188I TCNGA 3 cut(s) 78, 651, 788
Hpy188III TCNNGA 3 cut(s) 261, 820, 1064
Hpy8I GTNNAC 3 cut(s) 510, 807, 1108
HpyAV CCTTC 1 cut(s) 417
HpyCH4III ACNGT 4 cut(s) 142, 158, 536, 1003
HpyCH4IV ACGT 3 cut(s) 476, 529, 555
HpyF10VI GCNNNNNNNGC 4 cut(s) 281, 425, 923, 934
HpyF3I CTNAG 4 cut(s) 232, 307, 400, 585
HpySE526I ACGT 3 cut(s) 476, 529, 555
Hsp92II CATG 9 cut(s) 133, 166, 419, 469, 505, 545, 712, 852, 1093
HspAI GCGC 2 cut(s) 737, 926
Kpn2I TCCGGA 1 cut(s) 260
Kzo9I GATC 1 cut(s) 1066
LguI GCTCTTC 2 cut(s) 206, 476
LmnI GCTCC 2 cut(s) 602, 1156
Lsp1109I GCAGC 5 cut(s) 185, 347, 561, 784, 910
LweI GCATC 2 cut(s) 569, 722
MaeI CTAG 4 cut(s) 446, 605, 956, 980
MaeII ACGT 3 cut(s) 476, 529, 555
MaeIII GTNAC 4 cut(s) 158, 530, 817, 835
MalI GATC 1 cut(s) 1068
MboI GATC 1 cut(s) 1066
MboII GAAGA 5 cut(s) 223, 463, 676, 1042, 1092
MfeI CAATTG 1 cut(s) 1043
MhlI GDGCHC 1 cut(s) 599
MluCI AATT 4 cut(s) 289, 717, 947, 1043
MlyI GAGTC 4 cut(s) 822, 832, 1033, 1161
MnlI CCTC 7 cut(s) 198, 377, 452, 634, 744, 860, 965
MroI TCCGGA 1 cut(s) 260
MseI TTAA 4 cut(s) 137, 314, 519, 1189
MslI CAYNNNNRTG 3 cut(s) 448, 631, 1088
MspI CCGG 1 cut(s) 261
MunI CAATTG 1 cut(s) 1043
Mva1269I GAATGC 1 cut(s) 867
MwoI GCNNNNNNNGC 4 cut(s) 281, 425, 923, 934
NdeI CATATG 1 cut(s) 328
NdeII GATC 1 cut(s) 1066
NlaIII CATG 9 cut(s) 133, 166, 419, 469, 505, 545, 712, 852, 1093
NlaIV GGNNCC 2 cut(s) 463, 598
NmuCI GTSAC 2 cut(s) 817, 835
NspI RCATGY 2 cut(s) 166, 419
OliI CACNNNNGTG 1 cut(s) 448
PciI ACATGT 1 cut(s) 162
PciSI GCTCTTC 2 cut(s) 206, 476
PcsI WCGNNNNNNNCGW 1 cut(s) 659
PctI GAATGC 1 cut(s) 867
PfeI GAWTC 1 cut(s) 760
Pfl23II CGTACG 1 cut(s) 856
PkrI GCNGC 5 cut(s) 175, 337, 551, 799, 925
PleI GAGTC 4 cut(s) 822, 832, 1033, 1161
PmaCI CACGTG 1 cut(s) 556
PmlI CACGTG 1 cut(s) 556
PpsI GAGTC 4 cut(s) 822, 832, 1033, 1161
Ppu21I YACGTR 2 cut(s) 530, 556
PscI ACATGT 1 cut(s) 162
PspCI CACGTG 1 cut(s) 556
PspLI CGTACG 1 cut(s) 856
PspN4I GGNNCC 2 cut(s) 463, 598
PspPI GGNCC 3 cut(s) 219, 462, 869
PstI CTGCAG 2 cut(s) 175, 617
RsaI GTAC 3 cut(s) 28, 39, 858
RsaNI GTAC 3 cut(s) 27, 38, 857
RseI CAYNNNNRTG 3 cut(s) 448, 631, 1088
SapI GCTCTTC 2 cut(s) 206, 476
SaqAI TTAA 4 cut(s) 137, 314, 519, 1189
SatI GCNGC 5 cut(s) 174, 336, 550, 798, 924
Sau3AI GATC 1 cut(s) 1066
Sau96I GGNCC 3 cut(s) 219, 462, 869
SchI GAGTC 4 cut(s) 822, 832, 1033, 1161
SduI GDGCHC 1 cut(s) 599
SfaNI GCATC 2 cut(s) 569, 722
SfcI CTRYAG 3 cut(s) 171, 613, 726
SinI GGWCC 1 cut(s) 462
SmiMI CAYNNNNRTG 3 cut(s) 448, 631, 1088
SmlI CTYRAG 1 cut(s) 685
SmoI CTYRAG 1 cut(s) 685
SnaBI TACGTA 1 cut(s) 530
SpeI ACTAGT 1 cut(s) 445
Sse9I AATT 4 cut(s) 289, 717, 947, 1043
SsiI CCGC 1 cut(s) 119
SspMI CTAG 4 cut(s) 446, 605, 956, 980
StyI CCWWGG 1 cut(s) 955
TaaI ACNGT 4 cut(s) 142, 158, 536, 1003
TaiI ACGT 3 cut(s) 479, 532, 558
TasI AATT 4 cut(s) 289, 717, 947, 1043
TatI WGTACW 1 cut(s) 37
TfiI GAWTC 1 cut(s) 760
Tru1I TTAA 4 cut(s) 137, 314, 519, 1189
Tru9I TTAA 4 cut(s) 137, 314, 519, 1189
TscAI CASTG 2 cut(s) 60, 570
TseFI GTSAC 2 cut(s) 817, 835
TseI GCWGC 5 cut(s) 173, 335, 549, 797, 923
Tsp45I GTSAC 2 cut(s) 817, 835
TspDTI ATGAA 5 cut(s) 110, 558, 957, 1043, 1172
TspRI CASTG 2 cut(s) 60, 570
VpaK11BI GGWCC 1 cut(s) 462
XapI RAATTY 1 cut(s) 289
XceI RCATGY 2 cut(s) 166, 419
XmaJI CCTAGG 1 cut(s) 955
XmiI GTMKAC 1 cut(s) 806
XspI CTAG 4 cut(s) 446, 605, 956, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.