Rh7CG385300

WAT1-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
48639646 .. 48641646
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG385300.1

Sequence Viewer

Length: 1227 bp
ATGGGGCAGCAGGGTGGTATTGAGATTTCTAGCAGTCCTAGTAGTGTAGTAGATGGCTTAATGAAGCCGGTGATATCGATGGTGATCGTTCAAATTTCATATGCAGCAATGAATATATTTTGCAAACTTGCAGCAAACGCTGGAATGAATCTCAATATTCTCGTTGCCTACCGTCTCATGTTATCCTCTGCCTTTATCGTTCCTCTTGCTCTTATACTCGAAAGGAACAGCAGGCCCAAACTTACTCTAGTCGTACTCTTTCAAGCTTTTCTCTGCGGTTTGTTTGGGGGAACATTGTCACAAAATCTATTCGTAGAGGCACTGGTCTTGACATCTTCGACATTTGTTGCAGCCAGTGCAAATCTGATTCCGGCGGTCACCTTCATCATGGCCATCTGTTTCAGGTTGGAGAAGTTGACACTAGGAAGCCATGCAGGGAAGGCAAAGCTTGTGGGGACAGTGATGGGTATCGGTGGTGCTATGATCTTTACCTTCGTCAAAGGACCAGAGTTCTCCATCTGGTCAACTCACATTGACCTTCTTCGAGGTCACCAGGCGGCAGCACCATCACCGTCAACGTCCTCCTCCCACAGAAGCACCGGTAGTTACTTGCTGGGCTGCTTCTTGGCTCTCGGATGCACCGTTTCCTTTGCAATGTGGCTCATACTTCAGGCAAAAATGAGCAAGAGATATCCATGCCATTACTCGAGTACGGCTCTAATGTCGGTCATGGGATCGATTCAGTCGGTAGTTTTTGCACTCTGCGTGGAGAGGGATTGGAGCCAGTGGAAATTGGGTTGGAACATCAAGCTTCTTGCAGCTGCATATTCGGGAATTGTGACTTCGGGGATGGCGGTGGTTCTTGTCTCATGGTGTGTACGCAAGAGAGGTCCATTGTTCGTGTCAATTTTCACTCCGCTCTGCTTGGTGATTGTGGCCATTGCTAGTTCTTTGTTGCTCAATGAAAAGTTAAGCCTAGGAAGCGTATTAGGAGGGATTGTAATTGTATTGGGGCTATATATGGTGCTCTGGGGAAAGAGCAGGGAGATGAAGACAATTGATAATGTGAACAGTGATCAAGAACAACCAACCGCAGCAGCAGTACTACGATCTTCAACGAGACTCCAAGATTCCCAATTCATTGAAATTTTTGCAACAACTCAAGCACCGGACACTAATACCTCCGGTGACAATAACAGCAACACAAATGTTGTGTCTAGTAGTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

408

Amino Acids

43.65

Weight (kDa)

9.24

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 23 - 163 1.5e-11 EamA-like transporter family
EamA PF00892 205 - 343 6e-14 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 919
AciI CCGC 6 cut(s) 276, 374, 557, 854, 917, 1092
AclWI GGATC 1 cut(s) 742
AcoI YGGCCR 2 cut(s) 390, 936
AcsI RAATTY 2 cut(s) 93, 1146
AcuI CTGAAG 1 cut(s) 653
AfaI GTAC 4 cut(s) 255, 712, 879, 1104
AgeI ACCGGT 1 cut(s) 599
AgsI TTSAA 4 cut(s) 92, 263, 1116, 1145
AjnI CCWGG 1 cut(s) 552
AluBI AGCT 4 cut(s) 266, 448, 811, 821
AluI AGCT 4 cut(s) 266, 448, 811, 821
Alw21I GWGCWC 1 cut(s) 1029
Alw26I GTCTC 3 cut(s) 179, 871, 1114
AlwI GGATC 1 cut(s) 742
Ama87I CYCGRG 1 cut(s) 706
AoxI GGCC 3 cut(s) 233, 390, 936
ApoI RAATTY 2 cut(s) 93, 1146
ArsI GACNNNNNNTTYG 1 cut(s) 1199
AsiGI ACCGGT 1 cut(s) 599
AspA2I CCTAGG 1 cut(s) 976
AspS9I GGNCC 3 cut(s) 234, 503, 890
AsuHPI GGTGA 7 cut(s) 82, 94, 370, 542, 561, 940, 1199
AvaI CYCGRG 1 cut(s) 706
AvaII GGWCC 2 cut(s) 503, 890
AvrII CCTAGG 1 cut(s) 976
BalI TGGCCA 2 cut(s) 392, 938
BbsI GAAGAC 1 cut(s) 1058
Bbv12I GWGCWC 1 cut(s) 1029
BccI CCATC 7 cut(s) 47, 73, 401, 457, 524, 574, 844
BceAI ACGGC 1 cut(s) 729
BciT130I CCWGG 1 cut(s) 554
BclI TGATCA 1 cut(s) 1075
BcoDI GTCTC 3 cut(s) 179, 871, 1114
BfaI CTAG 7 cut(s) 30, 39, 248, 422, 945, 977, 1218
BlnI CCTAGG 1 cut(s) 976
BmcAI AGTACT 1 cut(s) 1104
Bme1390I CCNGG 1 cut(s) 554
Bme18I GGWCC 2 cut(s) 503, 890
BmeT110I CYCGRG 1 cut(s) 706
BmgT120I GGNCC 3 cut(s) 234, 503, 890
BmiI GGNNCC 1 cut(s) 782
BmrFI CCNGG 1 cut(s) 554
BmsI GCATC 1 cut(s) 626
BpiI GAAGAC 1 cut(s) 1058
BplI GAGNNNNNCTC 2 cut(s) 700, 732
BpuEI CTTGAG 1 cut(s) 1146
Bsa29I ATCGAT 2 cut(s) 77, 737
BsaBI GATNNNNATC 2 cut(s) 83, 467
BsaJI CCNNGG 1 cut(s) 976
BsaWI WCCGGW 3 cut(s) 599, 1168, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 984, 1014
Bse118I RCCGGY 2 cut(s) 67, 599
Bse1I ACTGG 3 cut(s) 327, 354, 784
Bse3DI GCAATG 3 cut(s) 114, 660, 939
Bse8I GATNNNNATC 2 cut(s) 83, 467
BseBI CCWGG 1 cut(s) 554
BseCI ATCGAT 2 cut(s) 77, 737
BseDI CCNNGG 1 cut(s) 976
BseGI GGATG 2 cut(s) 641, 855
BseJI GATNNNNATC 2 cut(s) 83, 467
BseMI GCAATG 3 cut(s) 114, 660, 939
BseNI ACTGG 3 cut(s) 327, 354, 784
BseRI GAGGAG 1 cut(s) 574
BseYI CCCAGC 1 cut(s) 613
BshFI GGCC 3 cut(s) 235, 392, 938
BshTI ACCGGT 1 cut(s) 599
BshVI ATCGAT 2 cut(s) 77, 737
BsiHKAI GWGCWC 1 cut(s) 1029
BsiHKCI CYCGRG 1 cut(s) 706
BsiSI CCGG 5 cut(s) 68, 371, 600, 1169, 1185
BslFI GGGAC 1 cut(s) 469
BsmAI GTCTC 3 cut(s) 179, 871, 1114
BsmBI CGTCTC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 469
BsnI GGCC 3 cut(s) 235, 392, 938
BsoBI CYCGRG 1 cut(s) 706
Bsp1286I GDGCHC 1 cut(s) 1029
Bsp143I GATC 5 cut(s) 84, 483, 734, 1075, 1109
BspACI CCGC 6 cut(s) 276, 374, 557, 854, 917, 1092
BspANI GGCC 3 cut(s) 235, 392, 938
BspDI ATCGAT 2 cut(s) 77, 737
BspLI GGNNCC 1 cut(s) 782
BspPI GGATC 1 cut(s) 742
BsrBI CCGCTC 1 cut(s) 919
BsrDI GCAATG 3 cut(s) 114, 660, 939
BsrFI RCCGGY 2 cut(s) 67, 599
BsrI ACTGG 3 cut(s) 327, 354, 784
BssAI RCCGGY 2 cut(s) 67, 599
BssECI CCNNGG 1 cut(s) 976
BssMI GATC 5 cut(s) 84, 483, 734, 1075, 1109
BssT1I CCWWGG 1 cut(s) 976
Bst2UI CCWGG 1 cut(s) 554
Bst4CI ACNGT 5 cut(s) 173, 460, 573, 643, 1073
BstAPI GCANNNNNTGC 1 cut(s) 356
BstC8I GCNNGC 1 cut(s) 233
BstEII GGTNACC 2 cut(s) 376, 548
BstF5I GGATG 2 cut(s) 641, 855
BstKTI GATC 5 cut(s) 87, 486, 737, 1078, 1112
BstMAI GTCTC 3 cut(s) 179, 871, 1114
BstMBI GATC 5 cut(s) 84, 483, 734, 1075, 1109
BstMWI GCNNNNNNNGC 4 cut(s) 137, 356, 440, 981
BstNI CCWGG 1 cut(s) 554
BstPI GGTNACC 2 cut(s) 376, 548
BstSCI CCNGG 1 cut(s) 552
BstV2I GAAGAC 1 cut(s) 1058
Bsu15I ATCGAT 2 cut(s) 77, 737
BsuRI GGCC 3 cut(s) 235, 392, 938
BsuTUI ATCGAT 2 cut(s) 77, 737
BtsCI GGATG 2 cut(s) 641, 855
BtsIMutI CAGTG 5 cut(s) 320, 361, 465, 791, 1078
Cac8I GCNNGC 1 cut(s) 233
Cfr10I RCCGGY 2 cut(s) 67, 599
Cfr13I GGNCC 3 cut(s) 234, 503, 890
ClaI ATCGAT 2 cut(s) 77, 737
Csp6I GTAC 4 cut(s) 254, 711, 878, 1103
CspAI ACCGGT 1 cut(s) 599
CspCI CAANNNNNGTGG 2 cut(s) 432, 467
CviAII CATG 6 cut(s) 178, 388, 431, 696, 730, 870
CviQI GTAC 4 cut(s) 254, 711, 878, 1103
DpnI GATC 5 cut(s) 86, 485, 736, 1077, 1111
DpnII GATC 5 cut(s) 84, 483, 734, 1075, 1109
EaeI YGGCCR 2 cut(s) 390, 936
Eco130I CCWWGG 1 cut(s) 976
Eco32I GATATC 2 cut(s) 75, 692
Eco47I GGWCC 2 cut(s) 503, 890
Eco57I CTGAAG 1 cut(s) 653
Eco88I CYCGRG 1 cut(s) 706
Eco91I GGTNACC 2 cut(s) 376, 548
EcoO65I GGTNACC 2 cut(s) 376, 548
EcoRII CCWGG 1 cut(s) 552
EcoRV GATATC 2 cut(s) 75, 692
EcoT14I CCWWGG 1 cut(s) 976
ErhI CCWWGG 1 cut(s) 976
Esp3I CGTCTC 1 cut(s) 179
FaeI CATG 6 cut(s) 181, 391, 434, 699, 733, 873
FaqI GGGAC 1 cut(s) 469
FatI CATG 6 cut(s) 177, 387, 430, 695, 729, 869
FauNDI CATATG 1 cut(s) 100
FbaI TGATCA 1 cut(s) 1075
FokI GGATG 2 cut(s) 648, 862
FspBI CTAG 7 cut(s) 30, 39, 248, 422, 945, 977, 1218
GsaI CCCAGC 1 cut(s) 617
HaeIII GGCC 3 cut(s) 235, 392, 938
HapII CCGG 5 cut(s) 68, 371, 600, 1169, 1185
Hin1II CATG 6 cut(s) 181, 391, 434, 699, 733, 873
HincII GTYRAC 3 cut(s) 417, 525, 576
HindII GTYRAC 3 cut(s) 417, 525, 576
HindIII AAGCTT 3 cut(s) 264, 446, 809
HinfI GANTC 5 cut(s) 148, 367, 739, 1122, 1130
HpaII CCGG 5 cut(s) 68, 371, 600, 1169, 1185
HphI GGTGA 7 cut(s) 82, 94, 370, 542, 561, 940, 1199
Hpy166II GTNNAC 5 cut(s) 417, 525, 576, 878, 1069
Hpy188I TCNGA 2 cut(s) 366, 635
Hpy188III TCNNGA 3 cut(s) 328, 831, 1079
Hpy8I GTNNAC 5 cut(s) 417, 525, 576, 878, 1069
HpyAV CCTTC 4 cut(s) 391, 433, 502, 548
HpyCH4III ACNGT 5 cut(s) 173, 460, 573, 643, 1073
HpyCH4IV ACGT 1 cut(s) 578
HpyF10VI GCNNNNNNNGC 4 cut(s) 137, 356, 440, 981
HpySE526I ACGT 1 cut(s) 578
Hsp92II CATG 6 cut(s) 181, 391, 434, 699, 733, 873
Ksp22I TGATCA 1 cut(s) 1075
Kzo9I GATC 5 cut(s) 84, 483, 734, 1075, 1109
LmnI GCTCC 1 cut(s) 780
LweI GCATC 1 cut(s) 626
MaeI CTAG 7 cut(s) 30, 39, 248, 422, 945, 977, 1218
MaeII ACGT 1 cut(s) 578
MaeIII GTNAC 6 cut(s) 297, 376, 548, 605, 838, 1187
MalI GATC 5 cut(s) 86, 485, 736, 1077, 1111
MbiI CCGCTC 1 cut(s) 919
MboI GATC 5 cut(s) 84, 483, 734, 1075, 1109
MboII GAAGA 4 cut(s) 327, 533, 1063, 1104
MfeI CAATTG 1 cut(s) 1056
MhlI GDGCHC 1 cut(s) 1029
MlsI TGGCCA 2 cut(s) 392, 938
MluCI AATT 8 cut(s) 93, 791, 834, 906, 1002, 1056, 1136, 1146
MluNI TGGCCA 2 cut(s) 392, 938
MlyI GAGTC 1 cut(s) 1116
MmeI TCCRAC 2 cut(s) 387, 779
Mox20I TGGCCA 2 cut(s) 392, 938
MscI TGGCCA 2 cut(s) 392, 938
MseI TTAA 2 cut(s) 59, 971
Msp20I TGGCCA 2 cut(s) 392, 938
MspA1I CMGCKG 1 cut(s) 821
MspI CCGG 5 cut(s) 68, 371, 600, 1169, 1185
MspR9I CCNGG 1 cut(s) 554
MunI CAATTG 1 cut(s) 1056
MvaI CCWGG 1 cut(s) 554
MwoI GCNNNNNNNGC 4 cut(s) 137, 356, 440, 981
NdeI CATATG 1 cut(s) 100
NdeII GATC 5 cut(s) 84, 483, 734, 1075, 1109
NlaIII CATG 6 cut(s) 181, 391, 434, 699, 733, 873
NlaIV GGNNCC 1 cut(s) 782
NmuCI GTSAC 5 cut(s) 297, 376, 548, 838, 1187
PaeR7I CTCGAG 1 cut(s) 706
PcsI WCGNNNNNNNCGW 1 cut(s) 639
PfeI GAWTC 4 cut(s) 148, 367, 739, 1130
PinAI ACCGGT 1 cut(s) 599
PleI GAGTC 1 cut(s) 1116
PpsI GAGTC 1 cut(s) 1116
Psp6I CCWGG 1 cut(s) 552
PspEI GGTNACC 2 cut(s) 376, 548
PspFI CCCAGC 1 cut(s) 613
PspGI CCWGG 1 cut(s) 552
PspN4I GGNNCC 1 cut(s) 782
PspPI GGNCC 3 cut(s) 234, 503, 890
PspXI VCTCGAGB 1 cut(s) 706
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 4 cut(s) 255, 712, 879, 1104
RsaNI GTAC 4 cut(s) 254, 711, 878, 1103
SaqAI TTAA 2 cut(s) 59, 971
Sau3AI GATC 5 cut(s) 84, 483, 734, 1075, 1109
Sau96I GGNCC 3 cut(s) 234, 503, 890
ScaI AGTACT 1 cut(s) 1104
SchI GAGTC 1 cut(s) 1116
ScrFI CCNGG 1 cut(s) 554
SduI GDGCHC 1 cut(s) 1029
SfaNI GCATC 1 cut(s) 626
Sfr274I CTCGAG 1 cut(s) 706
SinI GGWCC 2 cut(s) 503, 890
SlaI CTCGAG 1 cut(s) 706
SmlI CTYRAG 2 cut(s) 706, 1161
SmoI CTYRAG 2 cut(s) 706, 1161
Sse9I AATT 8 cut(s) 93, 791, 834, 906, 1002, 1056, 1136, 1146
SsiI CCGC 6 cut(s) 276, 374, 557, 854, 917, 1092
SspI AATATT 1 cut(s) 157
SspMI CTAG 7 cut(s) 30, 39, 248, 422, 945, 977, 1218
StyD4I CCNGG 1 cut(s) 552
StyI CCWWGG 1 cut(s) 976
TaaI ACNGT 5 cut(s) 173, 460, 573, 643, 1073
TaiI ACGT 1 cut(s) 581
TaqI TCGA 6 cut(s) 77, 219, 338, 544, 707, 737
TaqII GACCGA 1 cut(s) 715
TasI AATT 8 cut(s) 93, 791, 834, 906, 1002, 1056, 1136, 1146
TatI WGTACW 1 cut(s) 1102
TauI GCSGC 1 cut(s) 560
TfiI GAWTC 4 cut(s) 148, 367, 739, 1130
Tru1I TTAA 2 cut(s) 59, 971
Tru9I TTAA 2 cut(s) 59, 971
TscAI CASTG 5 cut(s) 327, 361, 465, 791, 1078
TseFI GTSAC 5 cut(s) 297, 376, 548, 838, 1187
Tsp45I GTSAC 5 cut(s) 297, 376, 548, 838, 1187
TspDTI ATGAA 8 cut(s) 77, 87, 125, 161, 373, 978, 1064, 1129
TspRI CASTG 5 cut(s) 327, 361, 465, 791, 1078
VpaK11BI GGWCC 2 cut(s) 503, 890
XapI RAATTY 2 cut(s) 93, 1146
XhoI CTCGAG 1 cut(s) 706
XmaJI CCTAGG 1 cut(s) 976
XspI CTAG 7 cut(s) 30, 39, 248, 422, 945, 977, 1218
ZrmI AGTACT 1 cut(s) 1104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.