MD08G1224500.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
28943608 .. 28946284
2677 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1224500.v1.1.491

Sequence Viewer

Length: 1179 bp
ATGTGTTGTAGTACTAGTGCAGTGCAAGGGTTGAAGCCAGTGATGATGATGCTGGTGGTTCAGACGGCATATGTAGTGATGAATATATTTTACAAACTAGTAGCAGAGGTTGGAACGAATTTCACCATCCTTATTGCCTACCGTAACCTGTTTTCTGCAGCACTAATGCTTCCTCTTGCTCTTACATTTGAAAGGAAGAGCAGACCCAAACTTACATTAGATATCCTTGTTCATGGTTTTATCTCCGGATTATTGGGGGCAACATTGACACAAAACTTTTACATAGAGAGCTTAGCCTTAACATCAGCAACGTATGTTGTAGCCTGCAGCAATCTTGTTCCAGTCATCACCTTCATTATAGCACTATGTTTTAGAATTGAGAGGTTAGCACTTGGGACACATACAGGTAGGGCAAAAGTTGTGGGGACACTCTTTTGTATAGGAGGGACAATGCTCTTCACCTTCTACAAAGGCAAACATATTGGCATCTGGTCAACACACGTTAATCTTTTACGCAACTATTCACATGAAAACAGTCGCGTTGCTTCATTGCATAGACACACTCGCACTCAATCGTTGGGCTCGTTCTTGGCACTTTGCAGTAGCACCTCCTTTGCATCCTGGTTGATATTTCAGACGAAAATGACTAAGAAATACCCTTGCCAATACTCAAGTACGGCTCTGATGTCTGTCATGGCATCAATCCAGTCTGTGGCTTTTGCCCTTTGCAAGGAGAGGGATTGGAGTCAGTGGAAGTTGGGCTGGGATATCAAACTTTTTACTGCTGTGTATTCGGGAGTCGTTACTACTGGATTGGTACTGACTCTAACCGCATGGTGTGTACGAATGCGAGGGCCACTGTTTGTGTCAATTTTCAACCCACTTGGCCTTTTGCTGATAGCCCTAGCAGCGACTTTCTTGTTAAATGAAAAGTTATATTTAGGAAGCATATTAGGAGGGACTCTAATTGTGTGTGGATTATACATGGTGCTGTGGGGTAAAAGCAAGGAGATGAAGATGATGACTCAACAGACACAACAGCCACCGCTTGAAGATCAGTCCCATTCCATTGACATTGCATTAACATCTCCAGTTAACAGTGCTGCTACTTGCGATATCGATGATCTATCAATCTCAACTCCTCCGATAAATGGACTCAAAGAAAACGTTGAGCATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

393

Amino Acids

43.26

Weight (kDa)

9.21

Isoelectric Point (pI)

31.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 13 - 154 1.6e-10 EamA-like transporter family
EamA PF00892 193 - 331 2.2e-12 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 712
AccII CGCG 1 cut(s) 540
AccIII TCCGGA 1 cut(s) 245
AciI CCGC 2 cut(s) 831, 1046
AclI AACGTT 1 cut(s) 1167
AcsI RAATTY 1 cut(s) 118
AfaI GTAC 4 cut(s) 13, 676, 819, 843
AfiI CCNNNNNNNGG 3 cut(s) 712, 730, 1151
AflIII ACRYGT 1 cut(s) 499
AgsI TTSAA 4 cut(s) 34, 191, 877, 1052
AhlI ACTAGT 2 cut(s) 14, 97
AjnI CCWGG 1 cut(s) 620
AluBI AGCT 1 cut(s) 291
AluI AGCT 1 cut(s) 291
Aor13HI TCCGGA 1 cut(s) 245
AoxI GGCC 2 cut(s) 854, 886
ApeKI GCWGC 4 cut(s) 158, 327, 908, 1103
ApoI RAATTY 1 cut(s) 118
AspS9I GGNCC 1 cut(s) 854
AsuHPI GGTGA 3 cut(s) 115, 340, 451
BanII GRGCYC 1 cut(s) 584
BbvI GCAGC 4 cut(s) 170, 339, 920, 1090
BccI CCATC 1 cut(s) 134
BceAI ACGGC 2 cut(s) 81, 693
BciT130I CCWGG 1 cut(s) 622
BcuI ACTAGT 2 cut(s) 14, 97
BfaI CTAG 3 cut(s) 15, 98, 905
BfmI CTRYAG 2 cut(s) 156, 325
BisI GCNGC 4 cut(s) 159, 328, 909, 1104
BlpI GCTNAGC 1 cut(s) 292
BlsI GCNGC 4 cut(s) 160, 329, 910, 1105
BmcAI AGTACT 1 cut(s) 13
Bme1390I CCNGG 1 cut(s) 622
BmgT120I GGNCC 1 cut(s) 854
BmrFI CCNGG 1 cut(s) 622
BmsI GCATC 4 cut(s) 39, 495, 626, 707
BpmI CTGGAG 1 cut(s) 1074
Bpu1102I GCTNAGC 1 cut(s) 292
BpuEI CTTGAG 1 cut(s) 655
Bsa29I ATCGAT 1 cut(s) 1119
BsaWI WCCGGW 1 cut(s) 245
Bsc4I CCNNNNNNNGG 3 cut(s) 712, 730, 1151
Bse1I ACTGG 5 cut(s) 38, 341, 706, 814, 1091
Bse3DI GCAATG 2 cut(s) 548, 1074
BseAI TCCGGA 1 cut(s) 245
BseBI CCWGG 1 cut(s) 622
BseCI ATCGAT 1 cut(s) 1119
BseGI GGATG 2 cut(s) 126, 617
BseLI CCNNNNNNNGG 3 cut(s) 712, 730, 1151
BseMI GCAATG 2 cut(s) 548, 1074
BseNI ACTGG 5 cut(s) 38, 341, 706, 814, 1091
BseRI GAGGAG 1 cut(s) 1131
BseXI GCAGC 4 cut(s) 170, 339, 920, 1090
BseYI CCCAGC 1 cut(s) 762
BsgI GTGCAG 1 cut(s) 39
Bsh1236I CGCG 1 cut(s) 540
BshFI GGCC 2 cut(s) 856, 888
BshVI ATCGAT 1 cut(s) 1119
BsiSI CCGG 1 cut(s) 246
BslFI GGGAC 5 cut(s) 409, 439, 460, 973, 1045
BslI CCNNNNNNNGG 3 cut(s) 712, 730, 1151
BsmFI GGGAC 5 cut(s) 409, 439, 460, 973, 1045
BsmI GAATGC 1 cut(s) 852
BsnI GGCC 2 cut(s) 856, 888
Bsp1286I GDGCHC 1 cut(s) 584
Bsp13I TCCGGA 1 cut(s) 245
Bsp143I GATC 2 cut(s) 1054, 1123
Bsp1720I GCTNAGC 1 cut(s) 292
BspACI CCGC 2 cut(s) 831, 1046
BspANI GGCC 2 cut(s) 856, 888
BspDI ATCGAT 1 cut(s) 1119
BspEI TCCGGA 1 cut(s) 245
BspFNI CGCG 1 cut(s) 540
BspMAI CTGCAG 2 cut(s) 160, 329
BspQI GCTCTTC 2 cut(s) 191, 461
BsrDI GCAATG 2 cut(s) 548, 1074
BsrI ACTGG 5 cut(s) 38, 341, 706, 814, 1091
BssMI GATC 2 cut(s) 1054, 1123
Bst2UI CCWGG 1 cut(s) 622
Bst4CI ACNGT 4 cut(s) 143, 536, 861, 1100
Bst6I CTCTTC 2 cut(s) 191, 461
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 2 cut(s) 292, 648
BstENI CCTNNNNNAGG 1 cut(s) 728
BstF5I GGATG 2 cut(s) 126, 617
BstFNI CGCG 1 cut(s) 540
BstKTI GATC 2 cut(s) 1057, 1126
BstMBI GATC 2 cut(s) 1054, 1123
BstMWI GCNNNNNNNGC 1 cut(s) 908
BstNI CCWGG 1 cut(s) 622
BstSCI CCNGG 1 cut(s) 620
BstSFI CTRYAG 2 cut(s) 156, 325
BstUI CGCG 1 cut(s) 540
BstV1I GCAGC 4 cut(s) 170, 339, 920, 1090
Bsu15I ATCGAT 1 cut(s) 1119
BsuRI GGCC 2 cut(s) 856, 888
BsuTUI ATCGAT 1 cut(s) 1119
BtsCI GGATG 2 cut(s) 126, 617
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 5 cut(s) 27, 45, 755, 857, 1105
Cac8I GCNNGC 1 cut(s) 325
Cfr13I GGNCC 1 cut(s) 854
ClaI ATCGAT 1 cut(s) 1119
Csp6I GTAC 4 cut(s) 12, 675, 818, 842
CspCI CAANNNNNGTGG 2 cut(s) 402, 437
CviAII CATG 5 cut(s) 233, 527, 694, 834, 985
CviQI GTAC 4 cut(s) 12, 675, 818, 842
DdeI CTNAG 2 cut(s) 292, 648
DpnI GATC 2 cut(s) 1056, 1125
DpnII GATC 2 cut(s) 1054, 1123
Eam1104I CTCTTC 2 cut(s) 191, 461
EarI CTCTTC 2 cut(s) 191, 461
Eco24I GRGCYC 1 cut(s) 584
Eco32I GATATC 3 cut(s) 223, 769, 1117
EcoNI CCTNNNNNAGG 1 cut(s) 728
EcoRII CCWGG 1 cut(s) 620
EcoRV GATATC 3 cut(s) 223, 769, 1117
EcoT38I GRGCYC 1 cut(s) 584
FaeI CATG 5 cut(s) 236, 530, 697, 837, 988
FaqI GGGAC 5 cut(s) 409, 439, 460, 973, 1045
FatI CATG 5 cut(s) 232, 526, 693, 833, 984
FauNDI CATATG 1 cut(s) 70
Fnu4HI GCNGC 4 cut(s) 159, 328, 909, 1104
FokI GGATG 2 cut(s) 113, 604
FriOI GRGCYC 1 cut(s) 584
Fsp4HI GCNGC 4 cut(s) 159, 328, 909, 1104
FspBI CTAG 3 cut(s) 15, 98, 905
GluI GCNGC 4 cut(s) 159, 328, 909, 1104
GsaI CCCAGC 1 cut(s) 766
GsuI CTGGAG 1 cut(s) 1074
HaeIII GGCC 2 cut(s) 856, 888
HapII CCGG 1 cut(s) 246
Hin1II CATG 5 cut(s) 236, 530, 697, 837, 988
HincII GTYRAC 2 cut(s) 495, 1096
HindII GTYRAC 2 cut(s) 495, 1096
HinfI GANTC 6 cut(s) 745, 798, 823, 961, 1024, 1155
HpaI GTTAAC 1 cut(s) 1096
HpaII CCGG 1 cut(s) 246
HphI GGTGA 3 cut(s) 115, 340, 451
Hpy166II GTNNAC 3 cut(s) 495, 842, 1096
Hpy188I TCNGA 4 cut(s) 63, 636, 684, 1146
Hpy188III TCNNGA 2 cut(s) 246, 795
Hpy8I GTNNAC 3 cut(s) 495, 842, 1096
HpyAV CCTTC 2 cut(s) 361, 472
HpyCH4III ACNGT 4 cut(s) 143, 536, 861, 1100
HpyCH4IV ACGT 3 cut(s) 311, 501, 1167
HpyCH4V TGCA 9 cut(s) 20, 25, 158, 327, 553, 600, 617, 729, 1079
HpyF10VI GCNNNNNNNGC 1 cut(s) 908
HpyF3I CTNAG 2 cut(s) 292, 648
HpySE526I ACGT 3 cut(s) 311, 501, 1167
Hsp92II CATG 5 cut(s) 236, 530, 697, 837, 988
Kpn2I TCCGGA 1 cut(s) 245
KspAI GTTAAC 1 cut(s) 1096
Kzo9I GATC 2 cut(s) 1054, 1123
LguI GCTCTTC 2 cut(s) 191, 461
Lsp1109I GCAGC 4 cut(s) 170, 339, 920, 1090
LweI GCATC 4 cut(s) 39, 495, 626, 707
MaeI CTAG 3 cut(s) 15, 98, 905
MaeII ACGT 3 cut(s) 311, 501, 1167
MaeIII GTNAC 2 cut(s) 143, 802
MalI GATC 2 cut(s) 1056, 1125
MboI GATC 2 cut(s) 1054, 1123
MboII GAAGA 4 cut(s) 208, 448, 1027, 1064
MhlI GDGCHC 1 cut(s) 584
MluCI AATT 4 cut(s) 118, 375, 870, 966
MlyI GAGTC 6 cut(s) 754, 807, 817, 955, 1018, 1149
MmeI TCCRAC 1 cut(s) 91
MnlI CCTC 9 cut(s) 100, 183, 375, 437, 619, 729, 845, 950, 1152
MroI TCCGGA 1 cut(s) 245
MseI TTAA 6 cut(s) 299, 504, 923, 1082, 1095, 1177
MspI CCGG 1 cut(s) 246
MspR9I CCNGG 1 cut(s) 622
Mva1269I GAATGC 1 cut(s) 852
MvaI CCWGG 1 cut(s) 622
MvnI CGCG 1 cut(s) 540
MwoI GCNNNNNNNGC 1 cut(s) 908
NdeI CATATG 1 cut(s) 70
NdeII GATC 2 cut(s) 1054, 1123
NlaIII CATG 5 cut(s) 236, 530, 697, 837, 988
PciSI GCTCTTC 2 cut(s) 191, 461
PcsI WCGNNNNNNNCGW 1 cut(s) 581
PctI GAATGC 1 cut(s) 852
PflMI CCANNNNNTGG 1 cut(s) 712
PkrI GCNGC 4 cut(s) 160, 329, 910, 1105
PleI GAGTC 6 cut(s) 753, 806, 817, 955, 1018, 1149
PpsI GAGTC 6 cut(s) 753, 806, 817, 955, 1018, 1149
Psp1406I AACGTT 1 cut(s) 1167
Psp6I CCWGG 1 cut(s) 620
PspFI CCCAGC 1 cut(s) 762
PspGI CCWGG 1 cut(s) 620
PspPI GGNCC 1 cut(s) 854
PstI CTGCAG 2 cut(s) 160, 329
RsaI GTAC 4 cut(s) 13, 676, 819, 843
RsaNI GTAC 4 cut(s) 12, 675, 818, 842
SapI GCTCTTC 2 cut(s) 191, 461
SaqAI TTAA 6 cut(s) 299, 504, 923, 1082, 1095, 1177
SatI GCNGC 4 cut(s) 159, 328, 909, 1104
Sau3AI GATC 2 cut(s) 1054, 1123
Sau96I GGNCC 1 cut(s) 854
ScaI AGTACT 1 cut(s) 13
SchI GAGTC 6 cut(s) 754, 807, 817, 955, 1018, 1149
ScrFI CCNGG 1 cut(s) 622
SduI GDGCHC 1 cut(s) 584
SfaNI GCATC 4 cut(s) 39, 495, 626, 707
SfcI CTRYAG 2 cut(s) 156, 325
SmlI CTYRAG 1 cut(s) 670
SmoI CTYRAG 1 cut(s) 670
SpeI ACTAGT 2 cut(s) 14, 97
Sse9I AATT 4 cut(s) 118, 375, 870, 966
SsiI CCGC 2 cut(s) 831, 1046
SspMI CTAG 3 cut(s) 15, 98, 905
StyD4I CCNGG 1 cut(s) 620
TaaI ACNGT 4 cut(s) 143, 536, 861, 1100
TaiI ACGT 3 cut(s) 314, 504, 1170
TaqI TCGA 1 cut(s) 1119
TasI AATT 4 cut(s) 118, 375, 870, 966
TatI WGTACW 1 cut(s) 11
Tru1I TTAA 6 cut(s) 299, 504, 923, 1082, 1095, 1177
Tru9I TTAA 6 cut(s) 299, 504, 923, 1082, 1095, 1177
TscAI CASTG 5 cut(s) 27, 45, 755, 864, 1105
TseI GCWGC 4 cut(s) 158, 327, 908, 1103
TspDTI ATGAA 7 cut(s) 95, 221, 343, 537, 543, 942, 1028
TspRI CASTG 5 cut(s) 27, 45, 755, 864, 1105
Van91I CCANNNNNTGG 1 cut(s) 712
XagI CCTNNNNNAGG 1 cut(s) 728
XapI RAATTY 1 cut(s) 118
XspI CTAG 3 cut(s) 15, 98, 905
ZrmI AGTACT 1 cut(s) 13
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.