Prupe.7G041900_v2.0.a1

WAT1-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000337
Physical Location & Seq
Forward (+)
7784050 .. 7786869
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G041900.3

Sequence Viewer

Length: 1038 bp
ATGAAATCAATACTAGTATTGATTTTTGTACAACTCTTATTCACAGTAATGAACCTTCTCTACATGGTGGCTACTGGAGATGGTGTAAATCTGACAGTTCTGGTAGCCTACCGGATGTGTTTTGGTGCGGCCGTGATGGACTGCATAACAAAACTAACATGGATGACACTCTTGAAAGGTTTTTTCTGCCGGCTATTTGGGGGTTCGTTGTCAACAAACTTATACATTGAGAGCCTGTCTTTAACATCACCAACATATACAGTTGCTATGTTAAATCTGGTGCCGGTCATCACCTTTATCCTAGCGGTAATTTTCAGGTTAGAGAAATTGTCCCTACAAACTACTACCGGTAAAGTTAAAATTATTGGAATAGTTATGGGCATAGGAGGAGCTATGGTGTTCAACCTCTACAGAGGCAAAGAGATCAACATGTGGTCAACGCATGTTGATCTTCTGCATACTCATGGGGAGCCACACACGGCATCACACAAAAGTCCTCAAGGTCTTTTGTGGGGGTGCATGCTATCATTGGGTGGTTGCGTCTCGTACGCATTATGGTTTTTAGTTCAGGAAAATCAGATAAAGAATTTCCCCTATCCTTACTCAAGCACAGCTCTAACGTCCCTGATGGCATCAATTCAATCCGTAATTTTTGCCTTCTGCGTGGAGAGGGACTGGAAGCAATGGAAGTTGGTACTTATGGCTTCATATTCGGGAATCTTAATCTCAGGACTTGCTCTGATCCTAATGACATGGGGTGTAAAGAAGGAAGGGCCATTCTTTGTTTCGGTTTTTCAGCCTGTGCTGCTTGTGATGGTTGCACTTGCAGGCTCTTTCCTTCTTGATGAGAAGTTACATATGGGAAGCATACTAGGAGGGCTGCTTATTGTGGTTGGACTATACGCCATATTGTGGGCTAGTAGTAAGGATAAATCTGATTCTCAACCCACATCCACGGAGGAGATGTTCATTCACTCAAGTATTGCACATACCGAAGCACATGCTGAAATAGACGACGGGGATTCACCGTCATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EamA

Protein Analysis

346

Amino Acids

37.95

Weight (kDa)

6.74

Isoelectric Point (pI)

32.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 912
AciI CCGC 2 cut(s) 128, 305
AclWI GGATC 1 cut(s) 736
AcoI YGGCCR 1 cut(s) 129
AcsI RAATTY 1 cut(s) 586
AfaI GTAC 3 cut(s) 30, 548, 696
AfiI CCNNNNNNNGG 1 cut(s) 912
AflIII ACRYGT 1 cut(s) 429
AgeI ACCGGT 1 cut(s) 347
AgsI TTSAA 3 cut(s) 175, 403, 641
AhlI ACTAGT 1 cut(s) 13
AloI GAACNNNNNNTCC 2 cut(s) 950, 982
AluBI AGCT 2 cut(s) 392, 614
AluI AGCT 2 cut(s) 392, 614
Alw26I GTCTC 1 cut(s) 547
AlwI GGATC 1 cut(s) 736
AoxI GGCC 2 cut(s) 129, 773
ApeKI GCWGC 2 cut(s) 805, 880
ApoI RAATTY 1 cut(s) 586
AsiGI ACCGGT 1 cut(s) 347
AspS9I GGNCC 1 cut(s) 773
AsuHPI GGTGA 3 cut(s) 240, 283, 1017
BanI GGYRCC 1 cut(s) 280
BarI GAAGNNNNNNTAC 2 cut(s) 39, 71
BbvI GCAGC 2 cut(s) 792, 867
BccI CCATC 4 cut(s) 74, 130, 622, 808
BceAI ACGGC 2 cut(s) 116, 495
BcgI CGANNNNNNTGC 2 cut(s) 983, 1017
BcoDI GTCTC 1 cut(s) 547
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 4 cut(s) 14, 302, 872, 918
BfmI CTRYAG 1 cut(s) 409
BisI GCNGC 3 cut(s) 129, 806, 881
BlsI GCNGC 3 cut(s) 130, 807, 882
BmgT120I GGNCC 1 cut(s) 773
BmiI GGNNCC 2 cut(s) 282, 471
BmsI GCATC 2 cut(s) 491, 641
BpmI CTGGAG 1 cut(s) 96
BpuEI CTTGAG 3 cut(s) 483, 589, 961
BsaJI CCNNGG 1 cut(s) 954
BsaWI WCCGGW 2 cut(s) 111, 347
BsaXI ACNNNNNCTCC 6 cut(s) 69, 99, 381, 411, 950, 980
Bsc4I CCNNNNNNNGG 1 cut(s) 912
Bse118I RCCGGY 3 cut(s) 189, 283, 347
Bse1I ACTGG 2 cut(s) 79, 680
Bse3DI GCAATG 1 cut(s) 689
BseDI CCNNGG 1 cut(s) 954
BseGI GGATG 3 cut(s) 120, 168, 950
BseLI CCNNNNNNNGG 1 cut(s) 912
BseMI GCAATG 1 cut(s) 689
BseMII CTCAG 1 cut(s) 741
BseNI ACTGG 2 cut(s) 79, 680
BseRI GAGGAG 2 cut(s) 402, 974
BseX3I CGGCCG 1 cut(s) 129
BseXI GCAGC 2 cut(s) 792, 867
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 2 cut(s) 131, 775
BshNI GGYRCC 1 cut(s) 280
BshTI ACCGGT 1 cut(s) 347
BsiEI CGRYCG 1 cut(s) 132
BsiSI CCGG 4 cut(s) 112, 190, 284, 348
BsiWI CGTACG 1 cut(s) 546
BslFI GGGAC 3 cut(s) 316, 607, 686
BslI CCNNNNNNNGG 1 cut(s) 912
BsmAI GTCTC 1 cut(s) 547
BsmBI CGTCTC 1 cut(s) 547
BsmFI GGGAC 3 cut(s) 316, 607, 686
BsnI GGCC 2 cut(s) 131, 775
Bsp1407I TGTACA 1 cut(s) 28
Bsp143I GATC 3 cut(s) 423, 448, 741
BspACI CCGC 2 cut(s) 128, 305
BspANI GGCC 2 cut(s) 131, 775
BspCNI CTCAG 1 cut(s) 740
BspLI GGNNCC 2 cut(s) 282, 471
BspPI GGATC 1 cut(s) 736
BspT107I GGYRCC 1 cut(s) 280
BsrDI GCAATG 1 cut(s) 689
BsrFI RCCGGY 3 cut(s) 189, 283, 347
BsrGI TGTACA 1 cut(s) 28
BsrI ACTGG 2 cut(s) 79, 680
BssAI RCCGGY 3 cut(s) 189, 283, 347
BssECI CCNNGG 1 cut(s) 954
BssMI GATC 3 cut(s) 423, 448, 741
Bst4CI ACNGT 4 cut(s) 46, 97, 262, 1029
BstAUI TGTACA 1 cut(s) 28
BstC8I GCNNGC 3 cut(s) 191, 521, 829
BstDEI CTNAG 1 cut(s) 727
BstDSI CCRYGG 1 cut(s) 954
BstF5I GGATG 3 cut(s) 120, 168, 950
BstKTI GATC 3 cut(s) 426, 451, 744
BstMAI GTCTC 1 cut(s) 547
BstMBI GATC 3 cut(s) 423, 448, 741
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 1 cut(s) 805
BstNSI RCATGY 4 cut(s) 433, 446, 523, 1004
BstSFI CTRYAG 1 cut(s) 409
BstV1I GCAGC 2 cut(s) 792, 867
BstZI CGGCCG 1 cut(s) 129
BsuRI GGCC 2 cut(s) 131, 775
BtgI CCRYGG 1 cut(s) 954
BtsCI GGATG 3 cut(s) 120, 168, 950
Cac8I GCNNGC 3 cut(s) 191, 521, 829
Cfr10I RCCGGY 3 cut(s) 189, 283, 347
Cfr13I GGNCC 1 cut(s) 773
CseI GACGC 1 cut(s) 529
Csp6I GTAC 3 cut(s) 29, 547, 695
CspAI ACCGGT 1 cut(s) 347
CviAII CATG 8 cut(s) 64, 159, 430, 443, 464, 520, 753, 1001
CviQI GTAC 3 cut(s) 29, 547, 695
DdeI CTNAG 1 cut(s) 727
DpnI GATC 3 cut(s) 425, 450, 743
DpnII GATC 3 cut(s) 423, 448, 741
EaeI YGGCCR 1 cut(s) 129
EagI CGGCCG 1 cut(s) 129
EclXI CGGCCG 1 cut(s) 129
Eco52I CGGCCG 1 cut(s) 129
Esp3I CGTCTC 1 cut(s) 547
FaeI CATG 8 cut(s) 67, 162, 433, 446, 467, 523, 756, 1004
FaqI GGGAC 3 cut(s) 316, 607, 686
FatI CATG 8 cut(s) 63, 158, 429, 442, 463, 519, 752, 1000
FauNDI CATATG 1 cut(s) 858
Fnu4HI GCNGC 3 cut(s) 129, 806, 881
FokI GGATG 3 cut(s) 127, 175, 937
Fsp4HI GCNGC 3 cut(s) 129, 806, 881
FspBI CTAG 4 cut(s) 14, 302, 872, 918
GluI GCNGC 3 cut(s) 129, 806, 881
GsuI CTGGAG 1 cut(s) 96
HaeIII GGCC 2 cut(s) 131, 775
HapII CCGG 4 cut(s) 112, 190, 284, 348
HgaI GACGC 1 cut(s) 529
Hin1II CATG 8 cut(s) 67, 162, 433, 446, 467, 523, 756, 1004
HincII GTYRAC 2 cut(s) 213, 438
HindII GTYRAC 2 cut(s) 213, 438
HinfI GANTC 3 cut(s) 717, 938, 1022
HpaII CCGG 4 cut(s) 112, 190, 284, 348
HphI GGTGA 3 cut(s) 240, 283, 1017
Hpy166II GTNNAC 2 cut(s) 213, 438
Hpy188I TCNGA 4 cut(s) 93, 579, 741, 937
Hpy188III TCNNGA 5 cut(s) 172, 569, 714, 729, 842
Hpy8I GTNNAC 2 cut(s) 213, 438
Hpy99I CGWCG 1 cut(s) 1019
HpyAV CCTTC 5 cut(s) 65, 667, 760, 764, 848
HpyCH4III ACNGT 4 cut(s) 46, 97, 262, 1029
HpyCH4IV ACGT 1 cut(s) 620
HpyCH4V TGCA 6 cut(s) 144, 457, 519, 821, 827, 986
HpyF10VI GCNNNNNNNGC 1 cut(s) 805
HpyF3I CTNAG 1 cut(s) 727
HpySE526I ACGT 1 cut(s) 620
Hsp92II CATG 8 cut(s) 67, 162, 433, 446, 467, 523, 756, 1004
KroI GCCGGC 1 cut(s) 189
KroNI GCCGGC 1 cut(s) 191
Kzo9I GATC 3 cut(s) 423, 448, 741
LmnI GCTCC 2 cut(s) 389, 469
Lsp1109I GCAGC 2 cut(s) 792, 867
LweI GCATC 2 cut(s) 491, 641
MaeI CTAG 4 cut(s) 14, 302, 872, 918
MaeII ACGT 1 cut(s) 620
MaeIII GTNAC 1 cut(s) 852
MalI GATC 3 cut(s) 425, 450, 743
MboI GATC 3 cut(s) 423, 448, 741
MboII GAAGA 1 cut(s) 443
MluCI AATT 6 cut(s) 309, 326, 360, 586, 636, 648
MmeI TCCRAC 1 cut(s) 874
MnlI CCTC 7 cut(s) 380, 407, 416, 507, 663, 869, 952
MroNI GCCGGC 1 cut(s) 189
MseI TTAA 4 cut(s) 242, 272, 357, 722
MslI CAYNNNNRTG 2 cut(s) 47, 462
MspI CCGG 4 cut(s) 112, 190, 284, 348
MwoI GCNNNNNNNGC 1 cut(s) 805
NaeI GCCGGC 1 cut(s) 191
NdeI CATATG 1 cut(s) 858
NdeII GATC 3 cut(s) 423, 448, 741
NgoMIV GCCGGC 1 cut(s) 189
NlaIII CATG 8 cut(s) 67, 162, 433, 446, 467, 523, 756, 1004
NlaIV GGNNCC 2 cut(s) 282, 471
NspI RCATGY 4 cut(s) 433, 446, 523, 1004
PaeI GCATGC 1 cut(s) 523
PciI ACATGT 1 cut(s) 429
PdiI GCCGGC 1 cut(s) 191
PfeI GAWTC 3 cut(s) 717, 938, 1022
Pfl23II CGTACG 1 cut(s) 546
PflMI CCANNNNNTGG 1 cut(s) 912
PinAI ACCGGT 1 cut(s) 347
PkrI GCNGC 3 cut(s) 130, 807, 882
PscI ACATGT 1 cut(s) 429
PspLI CGTACG 1 cut(s) 546
PspN4I GGNNCC 2 cut(s) 282, 471
PspPI GGNCC 1 cut(s) 773
PsrI GAACNNNNNNTAC 2 cut(s) 44, 76
RsaI GTAC 3 cut(s) 30, 548, 696
RsaNI GTAC 3 cut(s) 29, 547, 695
RseI CAYNNNNRTG 2 cut(s) 47, 462
SaqAI TTAA 4 cut(s) 242, 272, 357, 722
SatI GCNGC 3 cut(s) 129, 806, 881
Sau3AI GATC 3 cut(s) 423, 448, 741
Sau96I GGNCC 1 cut(s) 773
SetI ASST 9 cut(s) 57, 181, 296, 320, 394, 408, 505, 616, 623
SfaNI GCATC 2 cut(s) 491, 641
SfcI CTRYAG 1 cut(s) 409
SmiMI CAYNNNNRTG 2 cut(s) 47, 462
SmlI CTYRAG 3 cut(s) 498, 604, 976
SmoI CTYRAG 3 cut(s) 498, 604, 976
SpeI ACTAGT 1 cut(s) 13
SphI GCATGC 1 cut(s) 523
Sse9I AATT 6 cut(s) 309, 326, 360, 586, 636, 648
SsiI CCGC 2 cut(s) 128, 305
SspMI CTAG 4 cut(s) 14, 302, 872, 918
TaaI ACNGT 4 cut(s) 46, 97, 262, 1029
TaiI ACGT 1 cut(s) 623
TasI AATT 6 cut(s) 309, 326, 360, 586, 636, 648
TatI WGTACW 1 cut(s) 28
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 3 cut(s) 717, 938, 1022
Tru1I TTAA 4 cut(s) 242, 272, 357, 722
Tru9I TTAA 4 cut(s) 242, 272, 357, 722
TseI GCWGC 2 cut(s) 805, 880
TspDTI ATGAA 4 cut(s) 17, 65, 696, 958
TspGWI ACGGA 2 cut(s) 634, 971
Van91I CCANNNNNTGG 1 cut(s) 912
XapI RAATTY 1 cut(s) 586
XceI RCATGY 4 cut(s) 433, 446, 523, 1004
XspI CTAG 4 cut(s) 14, 302, 872, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.