MD08G1223600.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
28759764 .. 28765813
6050 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1223600.v1.1.491

Sequence Viewer

Length: 1188 bp
ATGACGATGGGTACTGATCAGACATGTAATGCTTTGCATGGGTTGAAGCCAGTGTTGTTAATGGTGGTAGTTCAGTTTGCATTTGCAGGAGTTAATGTTCTCTACAAACTGGCCGCTAACGACGGAATGAACTTAAGGATTCTTGTTGCATATCGCTTCATCTTTGCAACCGCCTTCATTCTTCCTATTGCTCTTTTCATTGAAAGGAAGAGCAGGCCAAAGCTCACATGGATGGTACTCTTGCAAGGATTTTTGTCTGGCTTGTTCGGTGGATCGTTATCACAAAATTTGTACATTGAAAGCTTAGCCTTAACATCGGCCACATTTGCTTCTGCCATAGTCCAACTCACCCCAGCCATTACTTTCATCTTGGCCATCACCTTCAGGCTGGAGAACTTGAGTTTGAGAAGCCCGGCAGGGAAGGCAAAGATGTTAGGAACATTAATGGGAATAGGTGGAGCAATGCTTCTGACCTTTTATAAGGGTGTGGAATTCAACATATGGTCCACGCATGTTGACCTTTTACACAGCCACTTGGCATCATCACCGCATACCGACTCTGGTAATCGACTATTGGGTTGTCTGCTAGCCTTGGGAAGCTGCTTTTGCTACGCTACATGGCTCATTATCCAGACTAAAATGAGTGCGACATACACTTGCTATTATTCAAGCACTGCTCTGATGTCAGCAATGGGGTCAATCCAGGCCGTTGGGTTTGCCCTCTGCAAGGAGAGGGAGTGGAGCCAATGGAAGCTAGGTTGGAATATTAGGCTTCTAACAGCGGCATACTCGGGAACTATGGCCACTGGGCTAAGTGTGACTTTTATTGCTTTGTGCATACGCATGAGAGGCCCTTTGTTCGTATCCGTTTTCAACCCTCTCATGTTGGTGCTCGTTGCCATTGTTGGGTCTTTGGTATTAGATGAGAAGCTACATCTTGGAAGCGTTTTGGGAGCAGTATTGATAGTGATTGGTTTATATGCGGTGCTGTGGGGCAAGGGCAAAGAAATAGAGAAGATGAGTAATTCAGTACCATCAACAAGCTTTCACCATCAGGATTCTGGCTCAATTGACATTGTGGTAATGTCTCCAGATAATAATAATAAAGGCAACAGCAACAACACTGAGAGCCTAACAAATAACAACGCGTCAAAGGCTACTAATTCTGCACTCAGCATGATTCGTTAA

Protein Analysis

396

Amino Acids

42.79

Weight (kDa)

9.3

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 17 - 158 2.3e-16 EamA-like transporter family
EamA PF00892 192 - 330 1.4e-12 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 480
AccII CGCG 1 cut(s) 1148
AciI CCGC 5 cut(s) 114, 171, 548, 782, 983
AclWI GGATC 1 cut(s) 280
AcoI YGGCCR 4 cut(s) 111, 318, 372, 801
AcsI RAATTY 2 cut(s) 286, 491
AcuI CTGAAG 1 cut(s) 367
AfaI GTAC 4 cut(s) 13, 237, 293, 1032
AfiI CCNNNNNNNGG 2 cut(s) 727, 906
AflII CTTAAG 1 cut(s) 133
AflIII ACRYGT 2 cut(s) 23, 1146
AgsI TTSAA 6 cut(s) 46, 203, 299, 496, 669, 874
AjnI CCWGG 1 cut(s) 702
AloI GAACNNNNNNTCC 2 cut(s) 81, 113
AluBI AGCT 6 cut(s) 223, 303, 600, 754, 931, 1044
AluI AGCT 6 cut(s) 223, 303, 600, 754, 931, 1044
Alw21I GWGCWC 1 cut(s) 894
Alw26I GTCTC 1 cut(s) 1092
AlwI GGATC 1 cut(s) 280
Ama87I CYCGRG 1 cut(s) 790
AoxI GGCC 7 cut(s) 111, 215, 318, 372, 705, 801, 850
ApeKI GCWGC 1 cut(s) 600
ApoI RAATTY 2 cut(s) 286, 491
AseI ATTAAT 1 cut(s) 443
AspS9I GGNCC 2 cut(s) 504, 851
AsuC2I CCSGG 1 cut(s) 413
AsuHPI GGTGA 4 cut(s) 340, 370, 537, 1040
AsuNHI GCTAGC 1 cut(s) 586
AvaI CYCGRG 1 cut(s) 790
AvaII GGWCC 1 cut(s) 504
BalI TGGCCA 2 cut(s) 374, 803
Bbv12I GWGCWC 1 cut(s) 894
BbvI GCAGC 1 cut(s) 587
BccI CCATC 4 cut(s) 226, 383, 1042, 1059
BceAI ACGGC 1 cut(s) 692
BciT130I CCWGG 1 cut(s) 704
BciVI GTATCC 1 cut(s) 874
BclI TGATCA 1 cut(s) 16
BcnI CCSGG 1 cut(s) 413
BcoDI GTCTC 1 cut(s) 1092
BfaI CTAG 2 cut(s) 587, 755
BfrI CTTAAG 1 cut(s) 133
BfuI GTATCC 1 cut(s) 874
BisI GCNGC 3 cut(s) 114, 601, 783
BlpI GCTNAGC 1 cut(s) 304
BlsI GCNGC 3 cut(s) 115, 602, 784
Bme1390I CCNGG 2 cut(s) 413, 704
Bme18I GGWCC 1 cut(s) 504
BmeT110I CYCGRG 1 cut(s) 790
BmgT120I GGNCC 2 cut(s) 504, 851
BmiI GGNNCC 1 cut(s) 743
BmrFI CCNGG 2 cut(s) 413, 704
BmrI ACTGGG 1 cut(s) 816
BmsI GCATC 1 cut(s) 548
BmtI GCTAGC 1 cut(s) 590
BmuI ACTGGG 1 cut(s) 816
BpmI CTGGAG 2 cut(s) 410, 1074
Bpu1102I GCTNAGC 1 cut(s) 304
BpuEI CTTGAG 1 cut(s) 418
BpuMI CCSGG 1 cut(s) 413
BsaBI GATNNNNATC 1 cut(s) 277
BsaJI CCNNGG 1 cut(s) 591
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 722, 752
Bsc4I CCNNNNNNNGG 2 cut(s) 727, 906
Bse1I ACTGG 3 cut(s) 50, 114, 811
Bse3DI GCAATG 2 cut(s) 468, 696
Bse8I GATNNNNATC 1 cut(s) 277
BseBI CCWGG 1 cut(s) 704
BseDI CCNNGG 1 cut(s) 591
BseGI GGATG 1 cut(s) 237
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 2 cut(s) 727, 906
BseMI GCAATG 2 cut(s) 468, 696
BseMII CTCAG 2 cut(s) 1116, 1186
BseNI ACTGG 3 cut(s) 50, 114, 811
BseXI GCAGC 1 cut(s) 587
BseYI CCCAGC 1 cut(s) 352
BsgI GTGCAG 1 cut(s) 1152
Bsh1236I CGCG 1 cut(s) 1148
BshFI GGCC 7 cut(s) 113, 217, 320, 374, 707, 803, 852
BsiHKAI GWGCWC 1 cut(s) 894
BsiHKCI CYCGRG 1 cut(s) 790
BsiSI CCGG 1 cut(s) 413
BslI CCNNNNNNNGG 2 cut(s) 727, 906
BsmAI GTCTC 1 cut(s) 1092
BsnI GGCC 7 cut(s) 113, 217, 320, 374, 707, 803, 852
BsoBI CYCGRG 1 cut(s) 790
Bsp1286I GDGCHC 1 cut(s) 894
Bsp1407I TGTACA 1 cut(s) 291
Bsp143I GATC 2 cut(s) 16, 272
Bsp1720I GCTNAGC 1 cut(s) 304
BspACI CCGC 5 cut(s) 114, 171, 548, 782, 983
BspANI GGCC 7 cut(s) 113, 217, 320, 374, 707, 803, 852
BspCNI CTCAG 2 cut(s) 1117, 1185
BspFNI CGCG 1 cut(s) 1148
BspLI GGNNCC 1 cut(s) 743
BspOI GCTAGC 1 cut(s) 590
BspPI GGATC 1 cut(s) 280
BspQI GCTCTTC 1 cut(s) 203
BspTI CTTAAG 1 cut(s) 133
BsrDI GCAATG 2 cut(s) 468, 696
BsrGI TGTACA 1 cut(s) 291
BsrI ACTGG 3 cut(s) 50, 114, 811
BssECI CCNNGG 1 cut(s) 591
BssMI GATC 2 cut(s) 16, 272
BssT1I CCWWGG 1 cut(s) 591
Bst2UI CCWGG 1 cut(s) 704
Bst6I CTCTTC 1 cut(s) 203
BstAFI CTTAAG 1 cut(s) 133
BstAUI TGTACA 1 cut(s) 291
BstC8I GCNNGC 2 cut(s) 215, 588
BstDEI CTNAG 4 cut(s) 304, 812, 1125, 1172
BstENI CCTNNNNNAGG 1 cut(s) 725
BstF5I GGATG 1 cut(s) 237
BstFNI CGCG 1 cut(s) 1148
BstKTI GATC 2 cut(s) 19, 275
BstMAI GTCTC 1 cut(s) 1092
BstMBI GATC 2 cut(s) 16, 272
BstMWI GCNNNNNNNGC 5 cut(s) 326, 422, 606, 849, 1154
BstNI CCWGG 1 cut(s) 704
BstNSI RCATGY 2 cut(s) 27, 515
BstSCI CCNGG 2 cut(s) 411, 702
BstUI CGCG 1 cut(s) 1148
BstV1I GCAGC 1 cut(s) 587
BstXI CCANNNNNNTGG 1 cut(s) 710
BsuI GTATCC 1 cut(s) 874
BsuRI GGCC 7 cut(s) 113, 217, 320, 374, 707, 803, 852
BtsCI GGATG 1 cut(s) 237
BtsI GCAGTG 1 cut(s) 672
BtsIMutI CAGTG 4 cut(s) 57, 672, 804, 1122
Cac8I GCNNGC 2 cut(s) 215, 588
Cfr13I GGNCC 2 cut(s) 504, 851
CseI GACGC 1 cut(s) 1137
Csp6I GTAC 4 cut(s) 12, 236, 292, 1031
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 8 cut(s) 24, 38, 228, 512, 618, 844, 883, 1177
CviQI GTAC 4 cut(s) 12, 236, 292, 1031
DdeI CTNAG 4 cut(s) 304, 812, 1125, 1172
DpnI GATC 2 cut(s) 18, 274
DpnII GATC 2 cut(s) 16, 272
EaeI YGGCCR 4 cut(s) 111, 318, 372, 801
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco130I CCWWGG 1 cut(s) 591
Eco47I GGWCC 1 cut(s) 504
Eco57I CTGAAG 1 cut(s) 367
Eco88I CYCGRG 1 cut(s) 790
EcoNI CCTNNNNNAGG 1 cut(s) 725
EcoO109I RGGNCCY 1 cut(s) 851
EcoRI GAATTC 1 cut(s) 491
EcoRII CCWGG 1 cut(s) 702
EcoT14I CCWWGG 1 cut(s) 591
ErhI CCWWGG 1 cut(s) 591
FaeI CATG 8 cut(s) 27, 41, 231, 515, 621, 847, 886, 1180
FalI AAGNNNNNCTT 2 cut(s) 805, 837
FatI CATG 8 cut(s) 23, 37, 227, 511, 617, 843, 882, 1176
FauNDI CATATG 1 cut(s) 500
FbaI TGATCA 1 cut(s) 16
Fnu4HI GCNGC 3 cut(s) 114, 601, 783
FokI GGATG 1 cut(s) 244
Fsp4HI GCNGC 3 cut(s) 114, 601, 783
FspBI CTAG 2 cut(s) 587, 755
GluI GCNGC 3 cut(s) 114, 601, 783
GsaI CCCAGC 1 cut(s) 356
GsuI CTGGAG 2 cut(s) 410, 1074
HaeIII GGCC 7 cut(s) 113, 217, 320, 374, 707, 803, 852
HapII CCGG 1 cut(s) 413
HgaI GACGC 1 cut(s) 1137
Hin1II CATG 8 cut(s) 27, 41, 231, 515, 621, 847, 886, 1180
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HindIII AAGCTT 2 cut(s) 301, 1042
HinfI GANTC 4 cut(s) 139, 557, 1058, 1180
HpaII CCGG 1 cut(s) 413
HphI GGTGA 4 cut(s) 340, 370, 537, 1040
Hpy166II GTNNAC 2 cut(s) 507, 517
Hpy188I TCNGA 3 cut(s) 21, 471, 681
Hpy188III TCNNGA 4 cut(s) 631, 792, 1055, 1091
Hpy8I GTNNAC 2 cut(s) 507, 517
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 3 cut(s) 184, 391, 415
HpyCH4V TGCA 9 cut(s) 37, 80, 86, 149, 167, 244, 726, 837, 1169
HpyF10VI GCNNNNNNNGC 5 cut(s) 326, 422, 606, 849, 1154
HpyF3I CTNAG 4 cut(s) 304, 812, 1125, 1172
Hsp92II CATG 8 cut(s) 27, 41, 231, 515, 621, 847, 886, 1180
Ksp22I TGATCA 1 cut(s) 16
Kzo9I GATC 2 cut(s) 16, 272
LguI GCTCTTC 1 cut(s) 203
LmnI GCTCC 3 cut(s) 458, 741, 953
Lsp1109I GCAGC 1 cut(s) 587
LweI GCATC 1 cut(s) 548
MaeI CTAG 2 cut(s) 587, 755
MaeIII GTNAC 1 cut(s) 817
MalI GATC 2 cut(s) 18, 274
MboI GATC 2 cut(s) 16, 272
MboII GAAGA 3 cut(s) 173, 220, 1027
MfeI CAATTG 1 cut(s) 1068
MhlI GDGCHC 1 cut(s) 894
MlsI TGGCCA 2 cut(s) 374, 803
MluCI AATT 5 cut(s) 286, 491, 1024, 1068, 1162
MluI ACGCGT 1 cut(s) 1146
MluNI TGGCCA 2 cut(s) 374, 803
MlyI GAGTC 1 cut(s) 551
MmeI TCCRAC 2 cut(s) 367, 740
MnlI CCTC 4 cut(s) 726, 731, 842, 888
Mox20I TGGCCA 2 cut(s) 374, 803
MscI TGGCCA 2 cut(s) 374, 803
MseI TTAA 6 cut(s) 59, 93, 134, 311, 443, 1186
MslI CAYNNNNRTG 3 cut(s) 230, 842, 887
Msp20I TGGCCA 2 cut(s) 374, 803
MspA1I CMGCKG 1 cut(s) 782
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 1 cut(s) 413
MspR9I CCNGG 2 cut(s) 413, 704
MunI CAATTG 1 cut(s) 1068
MvaI CCWGG 1 cut(s) 704
MvnI CGCG 1 cut(s) 1148
MwoI GCNNNNNNNGC 5 cut(s) 326, 422, 606, 849, 1154
NciI CCSGG 1 cut(s) 413
NdeI CATATG 1 cut(s) 500
NdeII GATC 2 cut(s) 16, 272
NheI GCTAGC 1 cut(s) 586
NlaIII CATG 8 cut(s) 27, 41, 231, 515, 621, 847, 886, 1180
NlaIV GGNNCC 1 cut(s) 743
NmuCI GTSAC 1 cut(s) 817
NspI RCATGY 2 cut(s) 27, 515
PciI ACATGT 1 cut(s) 23
PciSI GCTCTTC 1 cut(s) 203
PfeI GAWTC 3 cut(s) 139, 1058, 1180
PkrI GCNGC 3 cut(s) 115, 602, 784
PleI GAGTC 1 cut(s) 551
PpsI GAGTC 1 cut(s) 551
PscI ACATGT 1 cut(s) 23
PshBI ATTAAT 1 cut(s) 443
PsiI TTATAA 1 cut(s) 480
Psp6I CCWGG 1 cut(s) 702
PspFI CCCAGC 1 cut(s) 352
PspGI CCWGG 1 cut(s) 702
PspN4I GGNNCC 1 cut(s) 743
PspPI GGNCC 2 cut(s) 504, 851
RsaI GTAC 4 cut(s) 13, 237, 293, 1032
RsaNI GTAC 4 cut(s) 12, 236, 292, 1031
RseI CAYNNNNRTG 3 cut(s) 230, 842, 887
SapI GCTCTTC 1 cut(s) 203
SaqAI TTAA 6 cut(s) 59, 93, 134, 311, 443, 1186
SatI GCNGC 3 cut(s) 114, 601, 783
Sau3AI GATC 2 cut(s) 16, 272
Sau96I GGNCC 2 cut(s) 504, 851
SchI GAGTC 1 cut(s) 551
ScrFI CCNGG 2 cut(s) 413, 704
SduI GDGCHC 1 cut(s) 894
SfaNI GCATC 1 cut(s) 548
SinI GGWCC 1 cut(s) 504
SmiMI CAYNNNNRTG 3 cut(s) 230, 842, 887
SmlI CTYRAG 2 cut(s) 133, 397
SmoI CTYRAG 2 cut(s) 133, 397
Sse9I AATT 5 cut(s) 286, 491, 1024, 1068, 1162
SsiI CCGC 5 cut(s) 114, 171, 548, 782, 983
SspI AATATT 1 cut(s) 766
SspMI CTAG 2 cut(s) 587, 755
StyD4I CCNGG 2 cut(s) 411, 702
StyI CCWWGG 1 cut(s) 591
TaqI TCGA 1 cut(s) 568
TasI AATT 5 cut(s) 286, 491, 1024, 1068, 1162
TatI WGTACW 1 cut(s) 291
TauI GCSGC 2 cut(s) 116, 785
TfiI GAWTC 3 cut(s) 139, 1058, 1180
Tru1I TTAA 6 cut(s) 59, 93, 134, 311, 443, 1186
Tru9I TTAA 6 cut(s) 59, 93, 134, 311, 443, 1186
TscAI CASTG 4 cut(s) 57, 679, 811, 1129
TseFI GTSAC 1 cut(s) 817
TseI GCWGC 1 cut(s) 600
Tsp45I GTSAC 1 cut(s) 817
TspDTI ATGAA 5 cut(s) 143, 148, 166, 187, 355
TspGWI ACGGA 2 cut(s) 138, 856
TspRI CASTG 4 cut(s) 57, 679, 811, 1129
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 504
VspI ATTAAT 1 cut(s) 443
XagI CCTNNNNNAGG 1 cut(s) 725
XapI RAATTY 2 cut(s) 286, 491
XceI RCATGY 2 cut(s) 27, 515
XcmI CCANNNNNNNNNTGG 2 cut(s) 225, 1058
XspI CTAG 2 cut(s) 587, 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.