MD11G1290000.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
40972411 .. 40979560
7150 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1290000.v1.1.491

Sequence Viewer

Length: 1203 bp
ATGGCGATGGGTACTGGTCGGATATGTAATGCTCTGCATGGGTTGAAGCCAGTGTTGTTAATGGTGGTGGTTCAGTTTGCATTTGCAGGAGTTAATGTTCTCTACAAACTGGCCGCTAACGATGGAATGAACTTAAGTATTCTTGTTGCATATCGCTTCATTTTTGGAACCGCCTTCCTTCTTCCTATTGCTCTTTTCTTTGAAAGGAAGAACAGGCCAAAACTCAAATGGATGGTACTCCTGCAAGGATTTTTGTCTGGCTTGTTCGGTGGATCGTTATCACAAAATTTGTACATTGAAAGCTTAGCCTTAACATCGGCCACATTTGCTTCTGCCATAGCCCAACTCATCCCGGCTATTACTTTCATCTTGGCAATCACCTTCAGGCTGGAGAAGTTGAATTTGAGAAGCCTAACAGGGAAGGCAAAGGTGGTGGGAACATTGATGGGAATAGGTGGAGCAATGCTTCTGGCATTTTATGAGGGTGTGGAAATCAACATATGGTCCACGCATGTTGACCTTTTACATACTAGTCAGCAACAACACAGCCACTTGGCATCGTCACCGCATACAGATTCTGGTGATCGACTATTGGGTTGTCTACTGGCCTTCGGAAGCTGTATTTGTTACGCTATATGGCTCATTATCCTGACTAAAATGAGTGCGACATACCCTTGCTATTATTCAAGCACTGCTCTAATGTCAGCAATGGGGTCAATCCAGGCCGTTGGTTTTGCCCTCTGCAAGGAGAGTGAGTGGAGCCAATGGATGCTAGGTTGGAATATTAGGCTTCTAACAGTGGCATACTCGGGAATTATGGTCACTGGGCTAAGTGCTGCAATTATTGCTTTGTGCATAGGCATGAGAGGCCCTTTGTTTGTATCTGTTTTCAACCCTCTCATGTTGGTGCTCGTTGCCATCGTTGGGTCTTTGGTATTAGATGAGAAGTTGCATCTTGGAAGCGTTTTGGGAGCAGTGTTGATAGTGTGTGGCTTATATGCGGTGCTGTGGGGTAAGGGCAAAGAAATAGACAAGATGAGTAATTCAGTACCGTCAACAAGCTTTCATCATCAGGATTCTGGCTCAATTGACATTGTGATAATGCCTCCAGATAACAATAAAGGCAACAGCAACAACATTGAGAGCCTTACAAATAACAGTGCTTTAAAGGCTACTAGTTCTGCAGTCAGCATGATTCATTGA

Protein Analysis

401

Amino Acids

43.06

Weight (kDa)

8.85

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 17 - 157 9.7e-18 EamA-like transporter family
EamA PF00892 198 - 336 1.6e-09 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G25270 AT1G68170 AT1G68170
fragaria_vesca FvH4_5g30250 FvH4_5g30250 FvH4_5g30280 FvH4_5g30370 FvH4_5g30371 FvH4_7g27400 FvH4_7g27400 FvH4_7g27430
malus_domestica MD08G1223600.v1.1 MD08G1224100.v1.1 MD08G1224300.v1.1 MD08G1224400.v1.1 MD08G1224500.v1.1 MD11G1289900.v1.1 MD11G1290000.v1.1 MD15G1417300.v1.1 MD15G1417400.v1.1 MD15G1417500.v1.1 MD17G1230500.v1.1
prunus_persica Prupe.1G561200_v2.0.a1 Prupe.1G561300_v2.0.a1 Prupe.1G561400_v2.0.a1 Prupe.1G561500_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G041900_v2.0.a1 Prupe.7G042100_v2.0.a1
pyrus_communis pycom08g19530 pycom15g37030 pycom15g37040 pycom17g23340
rosa_chinensis RchiOBHm_Chr1g0374241 RchiOBHm_Chr7g0224261 RchiOBHm_Chr7g0224561 RchiOBHm_Chr7g0224591 RchiOBHm_Chr7g0224611 RchiOBHm_Chr7g0224641 RchiOBHm_Chr7g0224801 RchiOBHm_Chr7g0224831
rosa_laevigata RLG00000001850 RLG00000001853 RLG00000001869 RLG00000001876 RLG00000001880 RLG00000001884 RLG00000001909 RLG00000026752
rosa_multiflora Rmu_co8280549.1_g000001 Rmu_co8423019.1_g000001 Rmu_co8464247.1_g000001 Rmu_sc0000144.1_g000002 Rmu_sc0000144.1_g000055 Rmu_sc0007613.1_g000002 Rmu_sc0008008.1_g000015 Rmu_sc0010368.1_g000011 Rmu_sc0010368.1_g000019
rosa_roxburghii Rroxscaffold_3G00234350 Rroxscaffold_3G00234370 Rroxscaffold_3G00234560 Rroxscaffold_3G00234570 Rroxscaffold_3G00234590 Rroxscaffold_3G00234630 Rroxscaffold_4G00316910
rosa_rugosa Rorug01G0381800 Rorug07G0221700 Rorug07G0223900 Rorug07G0224000 Rorug07G0224100 Rorug07G0224200 Rorug07G0224500 Rorug07G0225900 Rorug07G0225900 Rorug07G0226100 Rorug07G0226100 Rorug07G0226200 Rorug07G0226300
rosa_samantha Rh1AG392800 Rh1BG356900 Rh1CG369900 Rh1DG387400 Rh7AG366800 Rh7AG377200 Rh7AG377300 Rh7AG378400 Rh7AG378600 Rh7AG378700 Rh7CG385300 Rh7CG395900 Rh7CG396000 Rh7CG397700 Rh7CG398000 Rh7CG398200 Rh7CG398300 Rh7DG360700 Rh7DG369900 Rh7DG370300 Rh7DG370500 Rh7DG370800 Rh7DG371600 Rh7DG371700
rosa_wichuraiana Rw1G034300 Rw7G031030 Rw7G031250 Rw7G031260 Rw7G031270 Rw7G031290 Rw7G031370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 601
AciI CCGC 4 cut(s) 114, 171, 566, 1001
AclWI GGATC 1 cut(s) 280
AcoI YGGCCR 2 cut(s) 111, 318
AcsI RAATTY 2 cut(s) 286, 400
AcuI CTGAAG 1 cut(s) 367
AfaI GTAC 4 cut(s) 13, 237, 293, 1050
AfiI CCNNNNNNNGG 2 cut(s) 745, 924
AflII CTTAAG 1 cut(s) 133
AgsI TTSAA 6 cut(s) 46, 203, 299, 400, 687, 892
AhlI ACTAGT 2 cut(s) 530, 1175
AjnI CCWGG 1 cut(s) 720
AloI GAACNNNNNNTCC 2 cut(s) 81, 113
AluBI AGCT 3 cut(s) 303, 618, 1062
AluI AGCT 3 cut(s) 303, 618, 1062
Alw21I GWGCWC 1 cut(s) 912
AlwI GGATC 1 cut(s) 280
AlwNI CAGNNNCTG 1 cut(s) 578
Ama87I CYCGRG 1 cut(s) 808
AoxI GGCC 6 cut(s) 111, 215, 318, 606, 723, 868
ApeKI GCWGC 1 cut(s) 836
ApoI RAATTY 2 cut(s) 286, 400
AspS9I GGNCC 2 cut(s) 504, 869
AsuC2I CCSGG 1 cut(s) 353
AsuHPI GGTGA 3 cut(s) 370, 555, 593
AvaI CYCGRG 1 cut(s) 808
AvaII GGWCC 1 cut(s) 504
Bbv12I GWGCWC 1 cut(s) 912
BbvI GCAGC 1 cut(s) 823
BccI CCATC 4 cut(s) 116, 226, 439, 926
BceAI ACGGC 1 cut(s) 710
BciT130I CCWGG 1 cut(s) 722
BcnI CCSGG 1 cut(s) 353
BcuI ACTAGT 2 cut(s) 530, 1175
BfaI CTAG 3 cut(s) 531, 773, 1176
BfmI CTRYAG 1 cut(s) 1182
BfrI CTTAAG 1 cut(s) 133
BisI GCNGC 2 cut(s) 114, 837
BlpI GCTNAGC 1 cut(s) 304
BlsI GCNGC 2 cut(s) 115, 838
Bme1390I CCNGG 2 cut(s) 353, 722
Bme18I GGWCC 1 cut(s) 504
BmeT110I CYCGRG 1 cut(s) 808
BmgT120I GGNCC 2 cut(s) 504, 869
BmiI GGNNCC 2 cut(s) 169, 761
BmrFI CCNGG 2 cut(s) 353, 722
BmrI ACTGGG 1 cut(s) 834
BmsI GCATC 3 cut(s) 566, 759, 961
BmuI ACTGGG 1 cut(s) 834
BpmI CTGGAG 2 cut(s) 410, 1092
Bpu1102I GCTNAGC 1 cut(s) 304
BpuMI CCSGG 1 cut(s) 353
BsaBI GATNNNNATC 1 cut(s) 277
BsaXI ACNNNNNCTCC 4 cut(s) 81, 111, 740, 770
Bsc4I CCNNNNNNNGG 2 cut(s) 745, 924
Bse1I ACTGG 5 cut(s) 19, 50, 114, 609, 829
Bse3DI GCAATG 2 cut(s) 468, 714
Bse8I GATNNNNATC 1 cut(s) 277
BseBI CCWGG 1 cut(s) 722
BseGI GGATG 3 cut(s) 237, 348, 774
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 2 cut(s) 745, 924
BseMI GCAATG 2 cut(s) 468, 714
BseNI ACTGG 5 cut(s) 19, 50, 114, 609, 829
BseXI GCAGC 1 cut(s) 823
BshFI GGCC 6 cut(s) 113, 217, 320, 608, 725, 870
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 1 cut(s) 808
BsiSI CCGG 1 cut(s) 353
BslI CCNNNNNNNGG 2 cut(s) 745, 924
BsnI GGCC 6 cut(s) 113, 217, 320, 608, 725, 870
BsoBI CYCGRG 1 cut(s) 808
Bsp1286I GDGCHC 1 cut(s) 912
Bsp1407I TGTACA 1 cut(s) 291
Bsp143I GATC 2 cut(s) 272, 583
Bsp1720I GCTNAGC 1 cut(s) 304
BspACI CCGC 4 cut(s) 114, 171, 566, 1001
BspANI GGCC 6 cut(s) 113, 217, 320, 608, 725, 870
BspLI GGNNCC 2 cut(s) 169, 761
BspMAI CTGCAG 1 cut(s) 1186
BspPI GGATC 1 cut(s) 280
BspTI CTTAAG 1 cut(s) 133
BsrDI GCAATG 2 cut(s) 468, 714
BsrGI TGTACA 1 cut(s) 291
BsrI ACTGG 5 cut(s) 19, 50, 114, 609, 829
BssMI GATC 2 cut(s) 272, 583
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 3 cut(s) 799, 1053, 1160
BstAFI CTTAAG 1 cut(s) 133
BstAPI GCANNNNNTGC 1 cut(s) 845
BstAUI TGTACA 1 cut(s) 291
BstDEI CTNAG 2 cut(s) 304, 830
BstENI CCTNNNNNAGG 1 cut(s) 743
BstF5I GGATG 3 cut(s) 237, 348, 774
BstKTI GATC 2 cut(s) 275, 586
BstMBI GATC 2 cut(s) 272, 583
BstMWI GCNNNNNNNGC 4 cut(s) 326, 845, 867, 1169
BstNI CCWGG 1 cut(s) 722
BstNSI RCATGY 1 cut(s) 515
BstSCI CCNGG 2 cut(s) 351, 720
BstSFI CTRYAG 1 cut(s) 1182
BstV1I GCAGC 1 cut(s) 823
BstXI CCANNNNNNTGG 1 cut(s) 728
BsuRI GGCC 6 cut(s) 113, 217, 320, 608, 725, 870
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 237, 348, 774
BtsI GCAGTG 2 cut(s) 690, 981
BtsIMutI CAGTG 6 cut(s) 57, 690, 804, 822, 981, 1165
CaiI CAGNNNCTG 1 cut(s) 578
Cfr13I GGNCC 2 cut(s) 504, 869
Csp6I GTAC 4 cut(s) 12, 236, 292, 1049
CspCI CAANNNNNGTGG 4 cut(s) 414, 449, 496, 531
CviAII CATG 5 cut(s) 38, 512, 862, 901, 1192
CviQI GTAC 4 cut(s) 12, 236, 292, 1049
DdeI CTNAG 2 cut(s) 304, 830
DpnI GATC 2 cut(s) 274, 585
DpnII GATC 2 cut(s) 272, 583
DraI TTTAAA 1 cut(s) 1167
EaeI YGGCCR 2 cut(s) 111, 318
Eco47I GGWCC 1 cut(s) 504
Eco57I CTGAAG 1 cut(s) 367
Eco88I CYCGRG 1 cut(s) 808
EcoNI CCTNNNNNAGG 1 cut(s) 743
EcoO109I RGGNCCY 1 cut(s) 869
EcoRII CCWGG 1 cut(s) 720
FaeI CATG 5 cut(s) 41, 515, 865, 904, 1195
FatI CATG 5 cut(s) 37, 511, 861, 900, 1191
FauNDI CATATG 1 cut(s) 500
FblI GTMKAC 1 cut(s) 601
Fnu4HI GCNGC 2 cut(s) 114, 837
FokI GGATG 3 cut(s) 244, 335, 781
Fsp4HI GCNGC 2 cut(s) 114, 837
FspBI CTAG 3 cut(s) 531, 773, 1176
GluI GCNGC 2 cut(s) 114, 837
GsuI CTGGAG 2 cut(s) 410, 1092
HaeIII GGCC 6 cut(s) 113, 217, 320, 608, 725, 870
HapII CCGG 1 cut(s) 353
Hin1II CATG 5 cut(s) 41, 515, 865, 904, 1195
HincII GTYRAC 2 cut(s) 517, 1056
HindII GTYRAC 2 cut(s) 517, 1056
HindIII AAGCTT 2 cut(s) 301, 1060
HinfI GANTC 3 cut(s) 575, 1076, 1195
HpaII CCGG 1 cut(s) 353
HphI GGTGA 3 cut(s) 370, 555, 593
Hpy166II GTNNAC 4 cut(s) 507, 517, 602, 1056
Hpy188I TCNGA 2 cut(s) 21, 614
Hpy188III TCNNGA 4 cut(s) 649, 810, 1073, 1109
Hpy8I GTNNAC 4 cut(s) 507, 517, 602, 1056
HpyAV CCTTC 5 cut(s) 184, 188, 391, 415, 619
HpyCH4III ACNGT 3 cut(s) 799, 1053, 1160
HpyF10VI GCNNNNNNNGC 4 cut(s) 326, 845, 867, 1169
HpyF3I CTNAG 2 cut(s) 304, 830
Hsp92II CATG 5 cut(s) 41, 515, 865, 904, 1195
Kzo9I GATC 2 cut(s) 272, 583
LmnI GCTCC 3 cut(s) 458, 759, 971
Lsp1109I GCAGC 1 cut(s) 823
LweI GCATC 3 cut(s) 566, 759, 961
MaeI CTAG 3 cut(s) 531, 773, 1176
MaeIII GTNAC 3 cut(s) 561, 626, 820
MalI GATC 2 cut(s) 274, 585
MboI GATC 2 cut(s) 272, 583
MboII GAAGA 2 cut(s) 173, 220
MfeI CAATTG 1 cut(s) 1086
MhlI GDGCHC 1 cut(s) 912
MluCI AATT 6 cut(s) 286, 400, 813, 840, 1042, 1086
MmeI TCCRAC 1 cut(s) 758
MnlI CCTC 5 cut(s) 475, 749, 860, 906, 1116
MseI TTAA 5 cut(s) 59, 93, 134, 311, 1166
MslI CAYNNNNRTG 2 cut(s) 860, 905
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 1 cut(s) 353
MspR9I CCNGG 2 cut(s) 353, 722
MunI CAATTG 1 cut(s) 1086
MvaI CCWGG 1 cut(s) 722
MwoI GCNNNNNNNGC 4 cut(s) 326, 845, 867, 1169
NciI CCSGG 1 cut(s) 353
NdeI CATATG 1 cut(s) 500
NdeII GATC 2 cut(s) 272, 583
NlaIII CATG 5 cut(s) 41, 515, 865, 904, 1195
NlaIV GGNNCC 2 cut(s) 169, 761
NmuCI GTSAC 2 cut(s) 561, 820
NspI RCATGY 1 cut(s) 515
PcsI WCGNNNNNNNCGW 1 cut(s) 918
PfeI GAWTC 3 cut(s) 575, 1076, 1195
PkrI GCNGC 2 cut(s) 115, 838
Psp6I CCWGG 1 cut(s) 720
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 2 cut(s) 169, 761
PspPI GGNCC 2 cut(s) 504, 869
PstI CTGCAG 1 cut(s) 1186
PstNI CAGNNNCTG 1 cut(s) 578
RsaI GTAC 4 cut(s) 13, 237, 293, 1050
RsaNI GTAC 4 cut(s) 12, 236, 292, 1049
RseI CAYNNNNRTG 2 cut(s) 860, 905
SaqAI TTAA 5 cut(s) 59, 93, 134, 311, 1166
SatI GCNGC 2 cut(s) 114, 837
Sau3AI GATC 2 cut(s) 272, 583
Sau96I GGNCC 2 cut(s) 504, 869
ScrFI CCNGG 2 cut(s) 353, 722
SduI GDGCHC 1 cut(s) 912
SetI ASST 8 cut(s) 305, 383, 432, 457, 522, 620, 778, 1064
SfaNI GCATC 3 cut(s) 566, 759, 961
SfcI CTRYAG 1 cut(s) 1182
SinI GGWCC 1 cut(s) 504
SmiMI CAYNNNNRTG 2 cut(s) 860, 905
SmlI CTYRAG 1 cut(s) 133
SmoI CTYRAG 1 cut(s) 133
SpeI ACTAGT 2 cut(s) 530, 1175
Sse9I AATT 6 cut(s) 286, 400, 813, 840, 1042, 1086
SsiI CCGC 4 cut(s) 114, 171, 566, 1001
SspI AATATT 1 cut(s) 784
SspMI CTAG 3 cut(s) 531, 773, 1176
StyD4I CCNGG 2 cut(s) 351, 720
TaaI ACNGT 3 cut(s) 799, 1053, 1160
TaqI TCGA 1 cut(s) 586
TasI AATT 6 cut(s) 286, 400, 813, 840, 1042, 1086
TatI WGTACW 1 cut(s) 291
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 3 cut(s) 575, 1076, 1195
Tru1I TTAA 5 cut(s) 59, 93, 134, 311, 1166
Tru9I TTAA 5 cut(s) 59, 93, 134, 311, 1166
TscAI CASTG 6 cut(s) 57, 697, 804, 829, 981, 1165
TseFI GTSAC 2 cut(s) 561, 820
TseI GCWGC 1 cut(s) 836
Tsp45I GTSAC 2 cut(s) 561, 820
TspDTI ATGAA 5 cut(s) 143, 148, 355, 1055, 1187
TspRI CASTG 6 cut(s) 57, 697, 804, 829, 981, 1165
Vha464I CTTAAG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 504
XagI CCTNNNNNAGG 1 cut(s) 743
XapI RAATTY 2 cut(s) 286, 400
XceI RCATGY 1 cut(s) 515
XcmI CCANNNNNNNNNTGG 1 cut(s) 225
XmiI GTMKAC 1 cut(s) 601
XspI CTAG 3 cut(s) 531, 773, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.