Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000300

Physical Location & Seq

Genomic Coordinates Reverse (-)

35683363 .. 35687270

Gene Structure 3908 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGCTTCCACACCTGGAATTCTTACTAACTGGCCATGGACACCTCTTGGGAGCTTTAAGTACTTGGTGTTAGCTCCTTGGGTGATTCACAGCACCTACTTGTTTATGTTTGGAGAAGAAGGCACAGATCTATTTTACATCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAATCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCACAGGAACAATCATTGACAAGGGCCTCGAATTCGAACAAGTTGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGTTGTTTTACATAGGCAGGTGCGTCCTGCCTAGGGCTCAAACTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTCGAGTACCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTTCTCTACTCTCGCTACCATTCTCATCACCATTCTTCCATTGTCACTGAGCCAATTACTTCTGTGGCTCACCCATTTGCAGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCATCACATCCTATTTTGTTTATATTACTTATATCGACCTCATGAACAACTTGGGACACTGCAACTTCGAGTTCATTCCGAACTGGATCTTCTCTCTTTTTCCTCCTCTTAAGTATCTCATTTATACTCCCTCGTACCACTCTTTGCATCACACTCAATTTCGTACCAATTACTCCCTCTTCATGCCAATCTATGACTACACATATGGTACCATGGACACGTCTAGTGATACTCTACATGAATCTTCACTCAGGAAAGAGGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTAAGTCCATCTACCGACTTCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACACACCTCAACATGGTACTTATGGTTGTTGTGGCCTGTAACATTAGGGTCTATGATGCTAACTCGGATATTTGACCGTTCGTTTGTTATTGAGAGACAGTGTTTTGATAAACAAAGACTACAAACTTGGGTTATTCCAAAATACAGTTTGCAGTACTTGGTCTCATGGCAAAATGAAGCTATAAACAGAGCGATTGAGGATGCCATACTTGAAGCTGAGAAAAAGGGTGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGGAGCTCAATAGTTATGGTGGTATATATGTCCAGAGGAATCCACAGCTGAAAATCAAGGTGGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCAAAAGGCGCTACCCAGGTTCTCCTGACAGGAAACCTCACAAAGGTTGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCTGGCTGAGTATTTGAAGCTCACCAAATCAGTAAATGCTACAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGATTTGGTTGGTGGGAGATGGATCCAATGAAAAAGAACAGTTGAGTGCACCCAACGGAACAATATTTGTTCCGTTCTCTCAATTCCCGCCAAAAAAGTTGCGAAAAGACTGTTACTATCACTGTACTCCAGCCATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGTGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCTGGGATAGTGCATGCATTGGAAGGTTGGAATGATCATGAGTGTGGTTACACCATGTCCGATATTGACAAAGTTTGGCAAGCTACTCTTCGACATGGCTTTCAGCCACTCATCCCCACCACTACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0008150 GO:0008152 GO:0012505 GO:0016020 GO:0016491 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00073 ko01110 map00073 map01110

Pfam Domains

Protein Families

FA_hydroxylase Wax2_C

Protein Analysis

619

Amino Acids

71.38

Weight (kDa)

7.38

Isoelectric Point (pI)

28.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FA_hydroxylase	PF04116	136 - 272	1.1e-20	Fatty acid hydroxylase
CER1-like_C	PF12076	450 - 612	3.4e-73	CER1-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000300)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02190 AT1G02190 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT1G02205 AT2G37700 AT2G37700 AT2G37700 AT2G37700
fragaria_vesca	FvH4_1g22160 FvH4_7g08560 FvH4_7g08560 FvH4_7g08560 FvH4_7g08570 FvH4_7g08570 FvH4_7g08590 FvH4_7g08590
malus_domestica	MD02G1226900.v1.1 MD07G1083700.v1.1 MD07G1083800.v1.1 MD07G1086200.v1.1 MD07G1086300.v1.1 MD07G1086700.v1.1 MD13G1075600.v1.1
prunus_persica	Prupe.2G112600_v2.0.a1 Prupe.2G112800_v2.0.a1 Prupe.2G113000_v2.0.a1 Prupe.2G113500_v2.0.a1 Prupe.2G113600_v2.0.a1
pyrus_communis	pycom02g19600 pycom02g19610 pycom07g06920 pycom07g06930
rosa_chinensis	RchiOBHm_Chr1g0343261 RchiOBHm_Chr1g0343301 RchiOBHm_Chr1g0343371 RchiOBHm_Chr1g0343431 RchiOBHm_Chr1g0343441 RchiOBHm_Chr1g0343521 RchiOBHm_Chr1g0343691 RchiOBHm_Chr1g0343791
rosa_laevigata	RLG00000028951 RLG00000028953 RLG00000028965 RLG00000028968 RLG00000028969 RLG00000028971 RLG00000028972 RLG00000028974 RLG00000029891
rosa_multiflora	Rmu_sc0000021.1_g000002 Rmu_sc0000335.1_g000046 Rmu_sc0000335.1_g000047 Rmu_sc0000335.1_g000058 Rmu_sc0000335.1_g000061 Rmu_sc0000335.1_g000106 Rmu_sc0000335.1_g000125 Rmu_sc0000544.1_g000010 Rmu_sc0003430.1_g000012 Rmu_sc0005796.1_g000004 Rmu_sc0028268.1_g000001 Rmu_ssc0000259.1_g000038
rosa_roxburghii	Rroxscaffold_2G00110090 Rroxscaffold_4G00310350 Rroxscaffold_4G00310610 Rroxscaffold_4G00310710 Rroxscaffold_4G00310740 Rroxscaffold_4G00310760 Rroxscaffold_4G00321110
rosa_rugosa	Rorug01G0080100 Rorug01G0080200 Rorug01G0166400 Rorug01G0166500 Rorug01G0166500 Rorug01G0166600 Rorug01G0166700 Rorug01G0166800 Rorug01G0168400 Rorug01G0168500 Rorug01G0168800 Rorug03G0241300 Rorug03G0241400 Rorug04G0001200 Rorug06G0031500 Rorug06G0073200 Rorug06G0264000
rosa_samantha	Rh1AG098100 Rh1AG181800 Rh1AG182100 Rh1AG182400 Rh1AG183000 Rh1AG183600 Rh1AG184300 Rh1AG185400 Rh1BG104000 Rh1BG150000 Rh1BG150400 Rh1BG152100 Rh1BG152300 Rh1CG168600 Rh1CG168900 Rh1CG169000 Rh1CG169700 Rh1CG170500 Rh1CG171200 Rh1DG182000 Rh1DG182300 Rh1DG184000 Rh1DG184200
rosa_wichuraiana	Rw0G012940 Rw1G007640 Rw1G007670 Rw1G011320 Rw1G015090 Rw1G015110 Rw1G015130 Rw1G015150 Rw1G015290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1196
AarI	CACCTGC	1 cut(s)	315
Acc36I	ACCTGC	1 cut(s)	315
Acc65I	GGTACC	1 cut(s)	812
AccB1I	GGYRCC	1 cut(s)	812
AciI	CCGC	1 cut(s)	1601
AclWI	GGATC	5 cut(s)	197, 698, 1530, 1543, 1648
AcoI	YGGCCR	1 cut(s)	32
AcsI	RAATTY	2 cut(s)	18, 251
AfaI	GTAC	8 cut(s)	62, 419, 740, 769, 814, 974, 1112, 1639
AfiI	CCNNNNNNNGG	3 cut(s)	340, 969, 1372
AflII	CTTAAG	1 cut(s)	713
AflIII	ACRYGT	1 cut(s)	822
AgsI	TTSAA	3 cut(s)	301, 1169, 1450
AjiI	CACGTC	1 cut(s)	825
AjnI	CCWGG	3 cut(s)	13, 1344, 1416
Alw21I	GWGCWC	4 cut(s)	445, 543, 1230, 1564
Alw26I	GTCTC	4 cut(s)	1045, 1123, 1211, 1668
Alw44I	GTGCAC	1 cut(s)	1560
AlwI	GGATC	5 cut(s)	197, 698, 1530, 1543, 1648
AoxI	GGCC	4 cut(s)	32, 244, 945, 989
ApaLI	GTGCAC	1 cut(s)	1560
ApeKI	GCWGC	1 cut(s)	394
ApoI	RAATTY	2 cut(s)	18, 251
ArsI	GACNNNNNNTTYG	2 cut(s)	1022, 1054
Asp700I	GAANNNNTTC	1 cut(s)	601
Asp718I	GGTACC	1 cut(s)	812
AspA2I	CCTAGG	1 cut(s)	338
AspLEI	GCGC	1 cut(s)	1340
AspS9I	GGNCC	2 cut(s)	244, 407
AsuHPI	GGTGA	8 cut(s)	94, 440, 476, 518, 861, 1232, 1447, 1720
AsuII	TTCGAA	1 cut(s)	255
AvaII	GGWCC	1 cut(s)	407
AvrII	CCTAGG	1 cut(s)	338
BaeGI	GKGCMC	1 cut(s)	1564
BalI	TGGCCA	1 cut(s)	34
BamHI	GGATCC	1 cut(s)	1535
BanI	GGYRCC	1 cut(s)	812
BanII	GRGCYC	2 cut(s)	346, 1230
Bbv12I	GWGCWC	4 cut(s)	445, 543, 1230, 1564
BbvI	GCAGC	1 cut(s)	381
BccI	CCATC	5 cut(s)	368, 614, 920, 1283, 1526
BciT130I	CCWGG	3 cut(s)	15, 1346, 1418
BclI	TGATCA	2 cut(s)	286, 1762
BcoDI	GTCTC	4 cut(s)	1045, 1123, 1211, 1668
BfaI	CTAG	2 cut(s)	339, 828
BfmI	CTRYAG	1 cut(s)	1473
BfoI	RGCGCY	1 cut(s)	1341
BfrI	CTTAAG	1 cut(s)	713
BfuAI	ACCTGC	1 cut(s)	315
BglII	AGATCT	1 cut(s)	127
BisI	GCNGC	1 cut(s)	395
BlnI	CCTAGG	1 cut(s)	338
BlpI	GCTNAGC	1 cut(s)	1300
BlsI	GCNGC	1 cut(s)	396
BmcAI	AGTACT	2 cut(s)	62, 1112
Bme1390I	CCNGG	3 cut(s)	15, 1346, 1418
Bme18I	GGWCC	1 cut(s)	407
BmgBI	CACGTC	1 cut(s)	825
BmgT120I	GGNCC	2 cut(s)	244, 407
BmiI	GGNNCC	2 cut(s)	814, 1537
BmrFI	CCNGG	3 cut(s)	15, 1346, 1418
BmsI	GCATC	5 cut(s)	159, 381, 760, 1002, 1147
BpmI	CTGGAG	1 cut(s)	1626
Bpu1102I	GCTNAGC	1 cut(s)	1300
Bpu14I	TTCGAA	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	1688
BsaBI	GATNNNNATC	1 cut(s)	188
BsaI	GGTCTC	2 cut(s)	1123, 1211
BsaJI	CCNNGG	7 cut(s)	35, 77, 338, 816, 942, 1344, 1700
BsaWI	WCCGGW	1 cut(s)	409
Bsc4I	CCNNNNNNNGG	3 cut(s)	340, 969, 1372
Bse1I	ACTGG	5 cut(s)	35, 434, 692, 933, 1697
Bse8I	GATNNNNATC	1 cut(s)	188
BseBI	CCWGG	3 cut(s)	15, 1346, 1418
BseDI	CCNNGG	7 cut(s)	35, 77, 338, 816, 942, 1344, 1700
BseGI	GGATG	8 cut(s)	138, 174, 289, 611, 1162, 1294, 1314, 1839
BseJI	GATNNNNATC	1 cut(s)	188
BseLI	CCNNNNNNNGG	3 cut(s)	340, 969, 1372
BseMII	CTCAG	4 cut(s)	495, 868, 1164, 1431
BseNI	ACTGG	5 cut(s)	35, 434, 692, 933, 1697
BseRI	GAGGAG	2 cut(s)	699, 1238
BseSI	GKGCMC	1 cut(s)	1564
BseXI	GCAGC	1 cut(s)	381
BseYI	CCCAGC	1 cut(s)	1730
Bsh1285I	CGRYCG	1 cut(s)	414
BshFI	GGCC	4 cut(s)	34, 246, 947, 991
BshNI	GGYRCC	1 cut(s)	812
BsiEI	CGRYCG	1 cut(s)	414
BsiHKAI	GWGCWC	4 cut(s)	445, 543, 1230, 1564
BsiSI	CCGG	1 cut(s)	410
BslFI	GGGAC	1 cut(s)	672
BslI	CCNNNNNNNGG	3 cut(s)	340, 969, 1372
BsmAI	GTCTC	4 cut(s)	1045, 1123, 1211, 1668
BsmFI	GGGAC	1 cut(s)	672
BsmI	GAATGC	1 cut(s)	1326
BsnI	GGCC	4 cut(s)	34, 246, 947, 991
Bso31I	GGTCTC	2 cut(s)	1123, 1211
Bsp119I	TTCGAA	1 cut(s)	255
Bsp1286I	GDGCHC	5 cut(s)	346, 445, 543, 1230, 1564
Bsp143I	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
Bsp1720I	GCTNAGC	1 cut(s)	1300
Bsp19I	CCATGG	2 cut(s)	35, 816
BspACI	CCGC	1 cut(s)	1601
BspANI	GGCC	4 cut(s)	34, 246, 947, 991
BspCNI	CTCAG	4 cut(s)	496, 867, 1165, 1432
BspHI	TCATGA	4 cut(s)	384, 645, 1492, 1765
BspLI	GGNNCC	2 cut(s)	814, 1537
BspMI	ACCTGC	1 cut(s)	315
BspPI	GGATC	5 cut(s)	197, 698, 1530, 1543, 1648
BspQI	GCTCTTC	1 cut(s)	566
BspT104I	TTCGAA	1 cut(s)	255
BspT107I	GGYRCC	1 cut(s)	812
BspTI	CTTAAG	1 cut(s)	713
BspTNI	GGTCTC	2 cut(s)	1123, 1211
BsrI	ACTGG	5 cut(s)	35, 434, 692, 933, 1697
BssECI	CCNNGG	7 cut(s)	35, 77, 338, 816, 942, 1344, 1700
BssMI	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
BssT1I	CCWWGG	6 cut(s)	35, 77, 338, 816, 942, 1700
Bst2UI	CCWGG	3 cut(s)	15, 1346, 1418
Bst4CI	ACNGT	6 cut(s)	1034, 1056, 1103, 1554, 1625, 1637
Bst6I	CTCTTC	3 cut(s)	566, 788, 1821
BstAFI	CTTAAG	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	255
BstC8I	GCNNGC	3 cut(s)	1437, 1743, 1809
BstDEI	CTNAG	6 cut(s)	504, 854, 906, 1173, 1300, 1440
BstDSI	CCRYGG	2 cut(s)	35, 816
BstENI	CCTNNNNNAGG	1 cut(s)	1370
BstF5I	GGATG	8 cut(s)	138, 174, 289, 611, 1162, 1294, 1314, 1839
BstH2I	RGCGCY	1 cut(s)	1341
BstHHI	GCGC	1 cut(s)	1340
BstKTI	GATC	8 cut(s)	130, 192, 289, 594, 693, 1538, 1656, 1765
BstMAI	GTCTC	4 cut(s)	1045, 1123, 1211, 1668
BstMBI	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
BstMCI	CGRYCG	1 cut(s)	414
BstMWI	GCNNNNNNNGC	1 cut(s)	944
BstNI	CCWGG	3 cut(s)	15, 1346, 1418
BstNSI	RCATGY	1 cut(s)	1745
BstSCI	CCNGG	3 cut(s)	13, 1344, 1416
BstSFI	CTRYAG	1 cut(s)	1473
BstSLI	GKGCMC	1 cut(s)	1564
BstV1I	GCAGC	1 cut(s)	381
BstX2I	RGATCY	5 cut(s)	127, 189, 690, 1535, 1653
BstYI	RGATCY	5 cut(s)	127, 189, 690, 1535, 1653
BsuRI	GGCC	4 cut(s)	34, 246, 947, 991
BtgI	CCRYGG	2 cut(s)	35, 816
BtrI	CACGTC	1 cut(s)	825
BtsCI	GGATG	8 cut(s)	138, 174, 289, 611, 1162, 1294, 1314, 1839
BtsI	GCAGTG	1 cut(s)	661
BtsIMutI	CAGTG	5 cut(s)	501, 661, 926, 1061, 1633
BveI	ACCTGC	1 cut(s)	315
Cac8I	GCNNGC	3 cut(s)	1437, 1743, 1809
CciI	TCATGA	4 cut(s)	384, 645, 1492, 1765
CfoI	GCGC	1 cut(s)	1340
Cfr13I	GGNCC	2 cut(s)	244, 407
CseI	GACGC	1 cut(s)	319
Csp6I	GTAC	8 cut(s)	61, 418, 739, 768, 813, 973, 1111, 1638
CviQI	GTAC	8 cut(s)	61, 418, 739, 768, 813, 973, 1111, 1638
DdeI	CTNAG	6 cut(s)	504, 854, 906, 1173, 1300, 1440
DpnI	GATC	8 cut(s)	129, 191, 288, 593, 692, 1537, 1655, 1764
DpnII	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
EaeI	YGGCCR	1 cut(s)	32
Eam1104I	CTCTTC	3 cut(s)	566, 788, 1821
EarI	CTCTTC	3 cut(s)	566, 788, 1821
Ecl136II	GAGCTC	1 cut(s)	1228
Eco130I	CCWWGG	6 cut(s)	35, 77, 338, 816, 942, 1700
Eco24I	GRGCYC	2 cut(s)	346, 1230
Eco31I	GGTCTC	2 cut(s)	1123, 1211
Eco32I	GATATC	1 cut(s)	1414
Eco47I	GGWCC	1 cut(s)	407
Eco53kI	GAGCTC	1 cut(s)	1228
EcoICRI	GAGCTC	1 cut(s)	1228
EcoNI	CCTNNNNNAGG	1 cut(s)	1370
EcoO109I	RGGNCCY	1 cut(s)	244
EcoRI	GAATTC	2 cut(s)	18, 251
EcoRII	CCWGG	3 cut(s)	13, 1344, 1416
EcoRV	GATATC	1 cut(s)	1414
EcoT14I	CCWWGG	6 cut(s)	35, 77, 338, 816, 942, 1700
EcoT22I	ATGCAT	1 cut(s)	1747
EcoT38I	GRGCYC	2 cut(s)	346, 1230
ErhI	CCWWGG	6 cut(s)	35, 77, 338, 816, 942, 1700
FalI	AAGNNNNNCTT	2 cut(s)	1800, 1832
FaqI	GGGAC	1 cut(s)	672
FauI	CCCGC	1 cut(s)	1608
FauNDI	CATATG	1 cut(s)	808
FbaI	TGATCA	2 cut(s)	286, 1762
Fnu4HI	GCNGC	1 cut(s)	395
FokI	GGATG	8 cut(s)	125, 181, 296, 598, 1169, 1301, 1301, 1826
FriOI	GRGCYC	2 cut(s)	346, 1230
Fsp4HI	GCNGC	1 cut(s)	395
FspBI	CTAG	2 cut(s)	339, 828
GlaI	GCGC	1 cut(s)	1339
GluI	GCNGC	1 cut(s)	395
GsaI	CCCAGC	1 cut(s)	1734
GsuI	CTGGAG	1 cut(s)	1626
HaeII	RGCGCY	1 cut(s)	1341
HaeIII	GGCC	4 cut(s)	34, 246, 947, 991
HapII	CCGG	1 cut(s)	410
HgaI	GACGC	1 cut(s)	319
HhaI	GCGC	1 cut(s)	1340
Hin6I	GCGC	1 cut(s)	1338
HinP1I	GCGC	1 cut(s)	1338
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HinfI	GANTC	4 cut(s)	85, 845, 866, 1261
HpaII	CCGG	1 cut(s)	410
HphI	GGTGA	8 cut(s)	94, 440, 476, 518, 861, 1232, 1447, 1720
Hpy166II	GTNNAC	3 cut(s)	265, 1562, 1678
Hpy188I	TCNGA	5 cut(s)	183, 596, 684, 1023, 1789
Hpy188III	TCNNGA	8 cut(s)	385, 646, 856, 1255, 1354, 1493, 1667, 1766
Hpy8I	GTNNAC	3 cut(s)	265, 1562, 1678
HpyAV	CCTTC	2 cut(s)	113, 1745
HpyCH4III	ACNGT	6 cut(s)	1034, 1056, 1103, 1554, 1625, 1637
HpyCH4IV	ACGT	1 cut(s)	824
HpyCH4V	TGCA	7 cut(s)	536, 666, 751, 1108, 1562, 1741, 1745
HpyF10VI	GCNNNNNNNGC	1 cut(s)	944
HpyF3I	CTNAG	6 cut(s)	504, 854, 906, 1173, 1300, 1440
HpySE526I	ACGT	1 cut(s)	824
HspAI	GCGC	1 cut(s)	1338
KpnI	GGTACC	1 cut(s)	816
Ksp22I	TGATCA	2 cut(s)	286, 1762
Kzo9I	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
LguI	GCTCTTC	1 cut(s)	566
LmnI	GCTCC	4 cut(s)	51, 79, 177, 1225
Lsp1109I	GCAGC	1 cut(s)	381
LweI	GCATC	5 cut(s)	159, 381, 760, 1002, 1147
MaeI	CTAG	2 cut(s)	339, 828
MaeII	ACGT	1 cut(s)	824
MaeIII	GTNAC	6 cut(s)	432, 499, 994, 1423, 1625, 1775
MalI	GATC	8 cut(s)	129, 191, 288, 593, 692, 1537, 1655, 1764
MboI	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
MboII	GAAGA	8 cut(s)	128, 483, 553, 685, 775, 840, 1663, 1808
MflI	RGATCY	5 cut(s)	127, 189, 690, 1535, 1653
MhlI	GDGCHC	5 cut(s)	346, 445, 543, 1230, 1564
MlsI	TGGCCA	1 cut(s)	34
MluCI	AATT	7 cut(s)	18, 251, 360, 510, 761, 772, 1595
MluNI	TGGCCA	1 cut(s)	34
MmeI	TCCRAC	1 cut(s)	1736
Mox20I	TGGCCA	1 cut(s)	34
Mph1103I	ATGCAT	1 cut(s)	1747
MroXI	GAANNNNTTC	1 cut(s)	601
MscI	TGGCCA	1 cut(s)	34
MseI	TTAA	6 cut(s)	57, 714, 896, 1212, 1320, 1858
MslI	CAYNNNNRTG	2 cut(s)	389, 1770
Msp20I	TGGCCA	1 cut(s)	34
MspA1I	CMGCKG	2 cut(s)	1270, 1435
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	1 cut(s)	410
MspR9I	CCNGG	3 cut(s)	15, 1346, 1418
Mva1269I	GAATGC	1 cut(s)	1326
MvaI	CCWGG	3 cut(s)	15, 1346, 1418
MwoI	GCNNNNNNNGC	1 cut(s)	944
NcoI	CCATGG	2 cut(s)	35, 816
NdeI	CATATG	1 cut(s)	808
NdeII	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
NlaIV	GGNNCC	2 cut(s)	814, 1537
NmuCI	GTSAC	1 cut(s)	499
NsiI	ATGCAT	1 cut(s)	1747
NspI	RCATGY	1 cut(s)	1745
NspV	TTCGAA	1 cut(s)	255
PaeI	GCATGC	1 cut(s)	1745
PagI	TCATGA	4 cut(s)	384, 645, 1492, 1765
PaqCI	CACCTGC	1 cut(s)	315
PciSI	GCTCTTC	1 cut(s)	566
PctI	GAATGC	1 cut(s)	1326
PdmI	GAANNNNTTC	1 cut(s)	601
PfeI	GAWTC	4 cut(s)	85, 845, 866, 1261
PkrI	GCNGC	1 cut(s)	396
PsiI	TTATAA	1 cut(s)	1196
Psp124BI	GAGCTC	1 cut(s)	1230
Psp6I	CCWGG	3 cut(s)	13, 1344, 1416
PspFI	CCCAGC	1 cut(s)	1730
PspGI	CCWGG	3 cut(s)	13, 1344, 1416
PspN4I	GGNNCC	2 cut(s)	814, 1537
PspPI	GGNCC	2 cut(s)	244, 407
PsuI	RGATCY	5 cut(s)	127, 189, 690, 1535, 1653
PvuII	CAGCTG	2 cut(s)	1270, 1435
RsaI	GTAC	8 cut(s)	62, 419, 740, 769, 814, 974, 1112, 1639
RsaNI	GTAC	8 cut(s)	61, 418, 739, 768, 813, 973, 1111, 1638
RseI	CAYNNNNRTG	2 cut(s)	389, 1770
SacI	GAGCTC	1 cut(s)	1230
SapI	GCTCTTC	1 cut(s)	566
SaqAI	TTAA	6 cut(s)	57, 714, 896, 1212, 1320, 1858
SatI	GCNGC	1 cut(s)	395
Sau3AI	GATC	8 cut(s)	127, 189, 286, 591, 690, 1535, 1653, 1762
Sau96I	GGNCC	2 cut(s)	244, 407
ScaI	AGTACT	2 cut(s)	62, 1112
ScrFI	CCNGG	3 cut(s)	15, 1346, 1418
SduI	GDGCHC	5 cut(s)	346, 445, 543, 1230, 1564
SfaNI	GCATC	5 cut(s)	159, 381, 760, 1002, 1147
SfcI	CTRYAG	1 cut(s)	1473
SfuI	TTCGAA	1 cut(s)	255
SinI	GGWCC	1 cut(s)	407
SmiMI	CAYNNNNRTG	2 cut(s)	389, 1770
SmlI	CTYRAG	2 cut(s)	713, 1667
SmoI	CTYRAG	2 cut(s)	713, 1667
SphI	GCATGC	1 cut(s)	1745
Sse9I	AATT	7 cut(s)	18, 251, 360, 510, 761, 772, 1595
SsiI	CCGC	1 cut(s)	1601
SspI	AATATT	1 cut(s)	1578
SspMI	CTAG	2 cut(s)	339, 828
SstI	GAGCTC	1 cut(s)	1230
StyD4I	CCNGG	3 cut(s)	13, 1344, 1416
StyI	CCWWGG	6 cut(s)	35, 77, 338, 816, 942, 1700
TaaI	ACNGT	6 cut(s)	1034, 1056, 1103, 1554, 1625, 1637
TaiI	ACGT	1 cut(s)	827
TaqI	TCGA	6 cut(s)	249, 255, 414, 639, 672, 1819
TasI	AATT	7 cut(s)	18, 251, 360, 510, 761, 772, 1595
TatI	WGTACW	3 cut(s)	60, 1110, 1637
TfiI	GAWTC	4 cut(s)	85, 845, 866, 1261
Tru1I	TTAA	6 cut(s)	57, 714, 896, 1212, 1320, 1858
Tru9I	TTAA	6 cut(s)	57, 714, 896, 1212, 1320, 1858
TscAI	CASTG	5 cut(s)	508, 668, 933, 1061, 1640
TseFI	GTSAC	1 cut(s)	499
TseI	GCWGC	1 cut(s)	394
Tsp45I	GTSAC	1 cut(s)	499
TspGWI	ACGGA	2 cut(s)	1575, 1584
TspRI	CASTG	5 cut(s)	508, 668, 933, 1061, 1640
Vha464I	CTTAAG	1 cut(s)	713
VneI	GTGCAC	1 cut(s)	1560
VpaK11BI	GGWCC	1 cut(s)	407
XagI	CCTNNNNNAGG	1 cut(s)	1370
XapI	RAATTY	2 cut(s)	18, 251
XceI	RCATGY	1 cut(s)	1745
XcmI	CCANNNNNNNNNTGG	1 cut(s)	159
XmaJI	CCTAGG	1 cut(s)	338
XmnI	GAANNNNTTC	1 cut(s)	601
XspI	CTAG	2 cut(s)	339, 828
ZrmI	AGTACT	2 cut(s)	62, 1112
Zsp2I	ATGCAT	1 cut(s)	1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.