ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 389 |
| AclWI | GGATC | 1 cut(s) | 389 |
| AgsI | TTSAA | 2 cut(s) | 128, 443 |
| AluBI | AGCT | 2 cut(s) | 312, 337 |
| AluI | AGCT | 2 cut(s) | 312, 337 |
| Alw26I | GTCTC | 1 cut(s) | 176 |
| AlwI | GGATC | 1 cut(s) | 389 |
| AoxI | GGCC | 1 cut(s) | 97 |
| AspS9I | GGNCC | 1 cut(s) | 321 |
| AsuC2I | CCSGG | 1 cut(s) | 418 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| AvaII | GGWCC | 1 cut(s) | 321 |
| BciVI | GTATCC | 1 cut(s) | 224 |
| BcnI | CCSGG | 1 cut(s) | 418 |
| BcoDI | GTCTC | 1 cut(s) | 176 |
| BfmI | CTRYAG | 1 cut(s) | 190 |
| BfuI | GTATCC | 1 cut(s) | 224 |
| BlpI | GCTNAGC | 1 cut(s) | 29 |
| Bme1390I | CCNGG | 1 cut(s) | 418 |
| Bme18I | GGWCC | 1 cut(s) | 321 |
| BmgT120I | GGNCC | 1 cut(s) | 321 |
| BmiI | GGNNCC | 3 cut(s) | 20, 113, 147 |
| BmrFI | CCNGG | 1 cut(s) | 418 |
| BmrI | ACTGGG | 1 cut(s) | 156 |
| BmuI | ACTGGG | 1 cut(s) | 156 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 29 |
| BpuMI | CCSGG | 1 cut(s) | 418 |
| BsaJI | CCNNGG | 4 cut(s) | 100, 116, 324, 417 |
| Bse1I | ACTGG | 1 cut(s) | 162 |
| BseDI | CCNNGG | 4 cut(s) | 100, 116, 324, 417 |
| BseGI | GGATG | 1 cut(s) | 397 |
| BseMII | CTCAG | 3 cut(s) | 69, 299, 468 |
| BseNI | ACTGG | 1 cut(s) | 162 |
| BseRI | GAGGAG | 1 cut(s) | 341 |
| BshFI | GGCC | 1 cut(s) | 99 |
| BsiSI | CCGG | 1 cut(s) | 417 |
| BsmAI | GTCTC | 1 cut(s) | 176 |
| BsnI | GGCC | 1 cut(s) | 99 |
| Bsp143I | GATC | 2 cut(s) | 394, 445 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 29 |
| BspACI | CCGC | 1 cut(s) | 389 |
| BspANI | GGCC | 1 cut(s) | 99 |
| BspCNI | CTCAG | 3 cut(s) | 70, 300, 467 |
| BspLI | GGNNCC | 3 cut(s) | 20, 113, 147 |
| BspMAI | CTGCAG | 1 cut(s) | 194 |
| BspPI | GGATC | 1 cut(s) | 389 |
| BsrI | ACTGG | 1 cut(s) | 162 |
| BssECI | CCNNGG | 4 cut(s) | 100, 116, 324, 417 |
| BssMI | GATC | 2 cut(s) | 394, 445 |
| BssT1I | CCWWGG | 2 cut(s) | 100, 116 |
| Bst4CI | ACNGT | 2 cut(s) | 124, 472 |
| BstC8I | GCNNGC | 1 cut(s) | 314 |
| BstDEI | CTNAG | 5 cut(s) | 29, 78, 176, 308, 454 |
| BstF5I | GGATG | 1 cut(s) | 397 |
| BstKTI | GATC | 2 cut(s) | 397, 448 |
| BstMAI | GTCTC | 1 cut(s) | 176 |
| BstMBI | GATC | 2 cut(s) | 394, 445 |
| BstSCI | CCNGG | 1 cut(s) | 416 |
| BstSFI | CTRYAG | 1 cut(s) | 190 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 107 |
| BsuI | GTATCC | 1 cut(s) | 224 |
| BsuRI | GGCC | 1 cut(s) | 99 |
| BtsCI | GGATG | 1 cut(s) | 397 |
| BtsI | GCAGTG | 1 cut(s) | 187 |
| BtsIMutI | CAGTG | 2 cut(s) | 169, 187 |
| Cac8I | GCNNGC | 1 cut(s) | 314 |
| Cfr13I | GGNCC | 1 cut(s) | 321 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 212, 247 |
| CviJI | RGCY | 4 cut(s) | 77, 99, 312, 337 |
| CviKI_1 | RGCY | 4 cut(s) | 77, 99, 312, 337 |
| DdeI | CTNAG | 5 cut(s) | 29, 78, 176, 308, 454 |
| DpnI | GATC | 2 cut(s) | 396, 447 |
| DpnII | GATC | 2 cut(s) | 394, 445 |
| EciI | GGCGGA | 1 cut(s) | 404 |
| Eco130I | CCWWGG | 2 cut(s) | 100, 116 |
| Eco47I | GGWCC | 1 cut(s) | 321 |
| EcoT14I | CCWWGG | 2 cut(s) | 100, 116 |
| ErhI | CCWWGG | 2 cut(s) | 100, 116 |
| FaiI | YATR | 3 cut(s) | 366, 372, 426 |
| FokI | GGATG | 1 cut(s) | 404 |
| HaeIII | GGCC | 1 cut(s) | 99 |
| HapII | CCGG | 1 cut(s) | 417 |
| HinfI | GANTC | 1 cut(s) | 184 |
| HpaII | CCGG | 1 cut(s) | 417 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 2 cut(s) | 305, 414 |
| Hpy188I | TCNGA | 2 cut(s) | 218, 462 |
| Hpy8I | GTNNAC | 2 cut(s) | 305, 414 |
| HpyAV | CCTTC | 3 cut(s) | 33, 67, 89 |
| HpyCH4III | ACNGT | 2 cut(s) | 124, 472 |
| HpyCH4V | TGCA | 2 cut(s) | 192, 468 |
| HpyF3I | CTNAG | 5 cut(s) | 29, 78, 176, 308, 454 |
| Kzo9I | GATC | 2 cut(s) | 394, 445 |
| LpnPI | CCDG | 5 cut(s) | 75, 175, 178, 430, 441 |
| MaeIII | GTNAC | 2 cut(s) | 196, 449 |
| MalI | GATC | 2 cut(s) | 396, 447 |
| MboI | GATC | 2 cut(s) | 394, 445 |
| MboII | GAAGA | 2 cut(s) | 286, 455 |
| MluCI | AATT | 1 cut(s) | 367 |
| MlyI | GAGTC | 1 cut(s) | 178 |
| MmeI | TCCRAC | 1 cut(s) | 241 |
| MnlI | CCTC | 4 cut(s) | 161, 319, 322, 402 |
| MseI | TTAA | 2 cut(s) | 135, 264 |
| MslI | CAYNNNNRTG | 1 cut(s) | 369 |
| MspI | CCGG | 1 cut(s) | 417 |
| MspR9I | CCNGG | 1 cut(s) | 418 |
| NciI | CCSGG | 1 cut(s) | 418 |
| NdeII | GATC | 2 cut(s) | 394, 445 |
| NlaIV | GGNNCC | 3 cut(s) | 20, 113, 147 |
| NmuCI | GTSAC | 1 cut(s) | 449 |
| PleI | GAGTC | 1 cut(s) | 178 |
| PpsI | GAGTC | 1 cut(s) | 178 |
| PspN4I | GGNNCC | 3 cut(s) | 20, 113, 147 |
| PspPI | GGNCC | 1 cut(s) | 321 |
| PstI | CTGCAG | 1 cut(s) | 194 |
| RseI | CAYNNNNRTG | 1 cut(s) | 369 |
| SaqAI | TTAA | 2 cut(s) | 135, 264 |
| Sau3AI | GATC | 2 cut(s) | 394, 445 |
| Sau96I | GGNCC | 1 cut(s) | 321 |
| SchI | GAGTC | 1 cut(s) | 178 |
| ScrFI | CCNGG | 1 cut(s) | 418 |
| SetI | ASST | 6 cut(s) | 314, 333, 339, 407, 413, 460 |
| SfcI | CTRYAG | 1 cut(s) | 190 |
| SinI | GGWCC | 1 cut(s) | 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 369 |
| Sse9I | AATT | 1 cut(s) | 367 |
| SsiI | CCGC | 1 cut(s) | 389 |
| StyD4I | CCNGG | 1 cut(s) | 416 |
| StyI | CCWWGG | 2 cut(s) | 100, 116 |
| TaaI | ACNGT | 2 cut(s) | 124, 472 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TaqII | GACCGA | 1 cut(s) | 338 |
| TasI | AATT | 1 cut(s) | 367 |
| Tru1I | TTAA | 2 cut(s) | 135, 264 |
| Tru9I | TTAA | 2 cut(s) | 135, 264 |
| TscAI | CASTG | 2 cut(s) | 169, 194 |
| TseFI | GTSAC | 1 cut(s) | 449 |
| Tsp45I | GTSAC | 1 cut(s) | 449 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 2 cut(s) | 169, 194 |
| VpaK11BI | GGWCC | 1 cut(s) | 321 |