ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 123, 335 |
| AfaI | GTAC | 3 cut(s) | 88, 108, 219 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 15, 138 |
| AgsI | TTSAA | 4 cut(s) | 178, 186, 269, 350 |
| AjiI | CACGTC | 1 cut(s) | 328 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 1 cut(s) | 272 |
| AluI | AGCT | 1 cut(s) | 272 |
| AlwI | GGATC | 2 cut(s) | 123, 335 |
| Ama87I | CYCGRG | 1 cut(s) | 162 |
| AoxI | GGCC | 2 cut(s) | 6, 59 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 35, 67 |
| AspS9I | GGNCC | 1 cut(s) | 59 |
| AsuC2I | CCSGG | 2 cut(s) | 163, 164 |
| AvaI | CYCGRG | 1 cut(s) | 162 |
| BbsI | GAAGAC | 1 cut(s) | 26 |
| BccI | CCATC | 1 cut(s) | 20 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BcnI | CCSGG | 2 cut(s) | 163, 164 |
| BfaI | CTAG | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 3 cut(s) | 134, 163, 164 |
| BmeT110I | CYCGRG | 1 cut(s) | 162 |
| BmgBI | CACGTC | 1 cut(s) | 328 |
| BmgT120I | GGNCC | 1 cut(s) | 59 |
| BmrFI | CCNGG | 3 cut(s) | 134, 163, 164 |
| BpiI | GAAGAC | 1 cut(s) | 26 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 206, 238 |
| BpuMI | CCSGG | 2 cut(s) | 163, 164 |
| BsaJI | CCNNGG | 2 cut(s) | 132, 162 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 15, 138 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 2 cut(s) | 132, 162 |
| BseGI | GGATG | 2 cut(s) | 31, 158 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 15, 138 |
| BseRI | GAGGAG | 2 cut(s) | 253, 256 |
| BshFI | GGCC | 2 cut(s) | 8, 61 |
| BsiHKCI | CYCGRG | 1 cut(s) | 162 |
| BsiSI | CCGG | 1 cut(s) | 163 |
| BslFI | GGGAC | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 15, 138 |
| BsmFI | GGGAC | 1 cut(s) | 105 |
| BsnI | GGCC | 2 cut(s) | 8, 61 |
| BsoBI | CYCGRG | 1 cut(s) | 162 |
| Bsp143I | GATC | 4 cut(s) | 115, 193, 286, 340 |
| BspANI | GGCC | 2 cut(s) | 8, 61 |
| BspPI | GGATC | 2 cut(s) | 123, 335 |
| BssECI | CCNNGG | 2 cut(s) | 132, 162 |
| BssMI | GATC | 4 cut(s) | 115, 193, 286, 340 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 1 cut(s) | 355 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstEII | GGTNACC | 1 cut(s) | 166 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 13 |
| BstF5I | GGATG | 2 cut(s) | 31, 158 |
| BstKTI | GATC | 4 cut(s) | 118, 196, 289, 343 |
| BstMBI | GATC | 4 cut(s) | 115, 193, 286, 340 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstPI | GGTNACC | 1 cut(s) | 166 |
| BstSCI | CCNGG | 3 cut(s) | 132, 161, 162 |
| BstV2I | GAAGAC | 1 cut(s) | 26 |
| BsuRI | GGCC | 2 cut(s) | 8, 61 |
| BtrI | CACGTC | 1 cut(s) | 328 |
| BtsCI | GGATG | 2 cut(s) | 31, 158 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| Cfr13I | GGNCC | 1 cut(s) | 59 |
| Cfr9I | CCCGGG | 1 cut(s) | 162 |
| Csp6I | GTAC | 3 cut(s) | 87, 107, 218 |
| CviAII | CATG | 2 cut(s) | 63, 124 |
| CviJI | RGCY | 4 cut(s) | 8, 61, 128, 272 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 61, 128, 272 |
| CviQI | GTAC | 3 cut(s) | 87, 107, 218 |
| DpnI | GATC | 4 cut(s) | 117, 195, 288, 342 |
| DpnII | GATC | 4 cut(s) | 115, 193, 286, 340 |
| Eco147I | AGGCCT | 1 cut(s) | 8 |
| Eco88I | CYCGRG | 1 cut(s) | 162 |
| Eco91I | GGTNACC | 1 cut(s) | 166 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 13 |
| EcoO65I | GGTNACC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| FaeI | CATG | 2 cut(s) | 66, 127 |
| FaiI | YATR | 2 cut(s) | 64, 125 |
| FaqI | GGGAC | 1 cut(s) | 105 |
| FatI | CATG | 2 cut(s) | 62, 123 |
| FokI | GGATG | 2 cut(s) | 38, 145 |
| FspBI | CTAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 2 cut(s) | 8, 61 |
| HapII | CCGG | 1 cut(s) | 163 |
| Hin1II | CATG | 2 cut(s) | 66, 127 |
| HinfI | GANTC | 1 cut(s) | 205 |
| HpaII | CCGG | 1 cut(s) | 163 |
| Hpy166II | GTNNAC | 1 cut(s) | 87 |
| Hpy188I | TCNGA | 3 cut(s) | 156, 193, 204 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 113, 290 |
| Hpy8I | GTNNAC | 1 cut(s) | 87 |
| HpyAV | CCTTC | 2 cut(s) | 19, 192 |
| HpyCH4III | ACNGT | 1 cut(s) | 355 |
| HpyCH4IV | ACGT | 1 cut(s) | 327 |
| HpySE526I | ACGT | 1 cut(s) | 327 |
| Hsp92II | CATG | 2 cut(s) | 66, 127 |
| Kzo9I | GATC | 4 cut(s) | 115, 193, 286, 340 |
| LpnPI | CCDG | 6 cut(s) | 80, 98, 119, 146, 176, 313 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MaeII | ACGT | 1 cut(s) | 327 |
| MaeIII | GTNAC | 4 cut(s) | 41, 166, 279, 335 |
| MalI | GATC | 4 cut(s) | 117, 195, 288, 342 |
| MboI | GATC | 4 cut(s) | 115, 193, 286, 340 |
| MboII | GAAGA | 2 cut(s) | 26, 191 |
| MmeI | TCCRAC | 2 cut(s) | 179, 299 |
| MnlI | CCTC | 7 cut(s) | 9, 69, 208, 231, 234, 237, 325 |
| MspI | CCGG | 1 cut(s) | 163 |
| MspR9I | CCNGG | 3 cut(s) | 134, 163, 164 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| NciI | CCSGG | 2 cut(s) | 163, 164 |
| NdeII | GATC | 4 cut(s) | 115, 193, 286, 340 |
| NlaIII | CATG | 2 cut(s) | 66, 127 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| PceI | AGGCCT | 1 cut(s) | 8 |
| PfeI | GAWTC | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspEI | GGTNACC | 1 cut(s) | 166 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| PspPI | GGNCC | 1 cut(s) | 59 |
| RsaI | GTAC | 3 cut(s) | 88, 108, 219 |
| RsaNI | GTAC | 3 cut(s) | 87, 107, 218 |
| Sau3AI | GATC | 4 cut(s) | 115, 193, 286, 340 |
| Sau96I | GGNCC | 1 cut(s) | 59 |
| ScrFI | CCNGG | 3 cut(s) | 134, 163, 164 |
| SetI | ASST | 8 cut(s) | 20, 48, 108, 184, 219, 274, 319, 330 |
| SmaI | CCCGGG | 1 cut(s) | 164 |
| SseBI | AGGCCT | 1 cut(s) | 8 |
| SspMI | CTAG | 1 cut(s) | 228 |
| StuI | AGGCCT | 1 cut(s) | 8 |
| StyD4I | CCNGG | 3 cut(s) | 132, 161, 162 |
| TaaI | ACNGT | 1 cut(s) | 355 |
| TaiI | ACGT | 1 cut(s) | 330 |
| TfiI | GAWTC | 1 cut(s) | 205 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 1 cut(s) | 112 |
| TspGWI | ACGGA | 1 cut(s) | 158 |
| TspMI | CCCGGG | 1 cut(s) | 162 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 13 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 69 |
| XmaI | CCCGGG | 1 cut(s) | 162 |
| XspI | CTAG | 1 cut(s) | 228 |