Rh5DG127400

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000619
Physical Location & Seq
Reverse (-)
11892134 .. 11894746
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG127400.1

Sequence Viewer

Length: 2005 bp
ATGACTGCTCCAGAGTTTCCGACCATTGGGTTAATTAGATCTAGAGTGGAGTGGGTTGCGGAGTGTTCCCAACCGGAGACTCAGTCAGAGGTACCAATGGAGGTTGAAGATGGCAGTAGGGACTCAGGGAGTTCAGAAGAGTCAGCCTCCAAGCGGAGGTGCTTGGCAGACAGACGACGGTCGGCGGTCATGGGGGATGAGGTTCAACTGACGGAGGTACCCATTGTGGAATGCACGGATTTCACGGCGGCCTTGAATTCGACGACCGCTGGCACGCCGGCAGTATTTGTGTCAGCTTTGAATGCTATACCTGCTGCACGAGCGCAACATTCAACTCCGACATTCTTGGGAGTCGTCAACAGTGTTGACAGCAAAGGGGTGGATTTGGCCGCTGTGGGTACAGCTGAAGTTAACTACAAGCAGGGTGGGCCCATTGCTGGGGTAATTACTTCAATGGCACCGACGCAGAAAGCTAAGATAAAAAATCAAGTGGGGAGTCAGAAGCGGGCCGTTCTGAACTCCGGGCTAGACAGGCCTCTTGAACGGGATTCATCCATGCATACAGAGGGGATGTCGTCTGAGCAAGGGGAGGGGTTGTCTTGTGAGCATGGGATGAATTCATTAAAAATGGGTGATACGTACATGTATGGGGAGGGGCTGTTTTGTGAGCATGGGATGAGTTCATTACAGTTGGGGGTTACGTGCATGCATGGGAAGGGGTTGGCTTGTGAGCATGGGATGTGTTCATTAAAGTTGGGTGGTACGTGCATGCATGGGAAGGAGTTGGCTTGTGAGCATGGGTTGAATTCTTTAAAGATGGGTGATACATACATGCATGAGGTTGAGGTGTCTGTTGAGCATGGGATGAGTTCAAAAAGAGTGAATAGTTCATGCATGCATGGGAAAGAAGTGGCTAGTGCGTCTGGGAAAAGTTTAAATAGTTTAAAGGGGGGCGACACATGCCTACATGAGGTGGGGCTGTCTAGTGAGCATGGGAAAAGTTTGAAGATTCATGGGGAAGGTTTACCGCATGCGCATGGGAATAAATTAAGCAAAGTGGGGGACACTCACACAAGCTTGCATGGGGAGGGGCTGTCGCGTGCGCTGGGGAACTCCTTTACAAAAAAAGGTGCAAGACAGATGGCTGGGATGCAAGAGATGTTACAATTTTGTGAGTTAGAGGAGATGAAGTTTTTGGGTCCAAAGTTTACATGGACAGGAATTAGAGGAGGGCAGGAGATTAAAATTCGGTTGGATAAGTTTGTGGGTACTATTAGCTGGAAGAATCTGTTTGTGGCTTCTTCTGTACGTCATCTTAATCCCACTACATCTGATCACTTGCCTATCCTTTTAGAGGTCAGAGAGAAAAGGAAGCGGAAAAAAAGGAGAAAAAAAAGGTTCAAATTTGAAGAGTTTTGGCTTAGGGAAGAGTCTTGCAGAGATGTTGTCAAGCAAGGATGGACTAATGCAGCTGGACCTGATCCCTTCCTCAACATTTGGAATAAAATAAAGAACACAAGAAGGGAACTTGAAACCTGGAGCGTCGAACTATTTGCGAAGGTGAAGCAAGAAATTGAAATGATAAGAGCTCAGCTTGCCTTTTTTTATGATTCCTCTTTAGGTGTGGCGGGGGATGTGGATAGGTCAACATTGGAAGCTAGGCTGAATGAGTTGTTACGGCGGGAACAAGACTTCTGGAAACAGCGTGCAAAAGCCTTTTGGTTGTCTGATGGTGATCTAAATACAAGGTTTTTCCACCAAAGGGTCCGTAACAGAAGGAAGAAGAACTGGATTTCAGGCTTATATAATGATGAAGGTATTTGGTGTACGGATGACAATGACTTGGAAAATATTGTCCTTTCTTACTTTCATGAGTTGTTCTCCTCTTCACTCCCGGATAATTTCCAGAATGTTCTAGAAGCCCTTCCTCAGGTCATTTCTGATGCTGACAATGGGGAACTGACGAAGGAGCTTGGAGAGGGGGAAATCTACGCAGCCATTAAGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

668

Amino Acids

74.03

Weight (kDa)

6.64

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000619)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29861 FvH4_3g26084 FvH4_3g32551 FvH4_4g08193 FvH4_4g12950 FvH4_6g29733
rosa_chinensis RchiOBHm_Chr3g0488921
rosa_multiflora Rmu_co8238041.1_g000001 Rmu_co8265215.1_g000001 Rmu_co8486357.1_g000002 Rmu_sc0000389.1_g000016 Rmu_sc0000580.1_g000123 Rmu_sc0000789.1_g000005 Rmu_sc0001043.1_g000006 Rmu_sc0001208.1_g000001 Rmu_sc0001323.1_g000011 Rmu_sc0001636.1_g000001 Rmu_sc0001911.1_g000023 Rmu_sc0001940.1_g000010 Rmu_sc0002531.1_g000047 Rmu_sc0002715.1_g000007 Rmu_sc0002833.1_g000024 Rmu_sc0003859.1_g000046 Rmu_sc0003894.1_g000008 Rmu_sc0004744.1_g000008 Rmu_sc0004924.1_g000016 Rmu_sc0004991.1_g000004 Rmu_sc0005149.1_g000010 Rmu_sc0005149.1_g000011 Rmu_sc0005489.1_g000007 Rmu_sc0005592.1_g000030 Rmu_sc0005813.1_g000010 Rmu_sc0005813.1_g000011 Rmu_sc0005861.1_g000009 Rmu_sc0005949.1_g000016 Rmu_sc0006824.1_g000021 Rmu_sc0007069.1_g000025 Rmu_sc0008002.1_g000008 Rmu_sc0008148.1_g000008 Rmu_sc0008280.1_g000001 Rmu_sc0008317.1_g000010 Rmu_sc0011615.1_g000002 Rmu_sc0013925.1_g000004 Rmu_sc0014130.1_g000003 Rmu_sc0014510.1_g000008 Rmu_sc0016640.1_g000001 Rmu_sc0018068.1_g000002 Rmu_sc0021371.1_g000006 Rmu_sc0028652.1_g000007 Rmu_sc0032187.1_g000002 Rmu_sc0034241.1_g000001 Rmu_ssc0000127.1_g000003
rosa_roxburghii Rroxscaffold_6G00403950
rosa_rugosa Rorug01G0081700 Rorug02G0544000 Rorug05G0089900 Rorug05G0284500 Rorug05G0452400 Rorug07G0003400 Rorug07G0003400 Rorug07G0129200 Rorug07G0210600
rosa_samantha Rh1AG193900 Rh1AG194000 Rh1DG063400 Rh1DG204700 Rh2AG364300 Rh3BG140200 Rh3CG366000 Rh4DG342600 Rh5AG347700 Rh5BG437300 Rh5CG459900 Rh5DG127400 Rh5DG412800 Rh6BG381500 Rh7CG520500 Rh7DG241900 Rh7DG336000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1035
Acc36I ACCTGC 1 cut(s) 319
Acc65I GGTACC 2 cut(s) 91, 217
AccB1I GGYRCC 3 cut(s) 91, 217, 457
AccII CGCG 1 cut(s) 1099
AclWI GGATC 1 cut(s) 1475
AcoI YGGCCR 1 cut(s) 387
AcsI RAATTY 5 cut(s) 256, 616, 805, 1245, 1403
AcuI CTGAAG 1 cut(s) 426
AfaI GTAC 8 cut(s) 93, 219, 400, 641, 763, 1270, 1308, 1828
AfiI CCNNNNNNNGG 9 cut(s) 26, 153, 156, 437, 438, 970, 1354, 1762, 1930
AflIII ACRYGT 1 cut(s) 642
AjnI CCWGG 1 cut(s) 1535
Alw21I GWGCWC 1 cut(s) 1591
Alw26I GTCTC 1 cut(s) 71
AlwI GGATC 1 cut(s) 1475
AoxI GGCC 5 cut(s) 249, 387, 428, 507, 533
ApaI GGGCCC 1 cut(s) 432
ApeKI GCWGC 3 cut(s) 314, 1469, 1994
ApoI RAATTY 5 cut(s) 256, 616, 805, 1245, 1403
Asp700I GAANNNNTTC 1 cut(s) 1923
Asp718I GGTACC 2 cut(s) 91, 217
AspLEI GCGC 3 cut(s) 325, 1036, 1105
AspS9I GGNCC 6 cut(s) 428, 429, 507, 1199, 1475, 1765
AsuC2I CCSGG 2 cut(s) 523, 1895
AsuHPI GGTGA 4 cut(s) 644, 833, 1573, 1745
AvaII GGWCC 3 cut(s) 1199, 1475, 1765
AxyI CCTNAGG 1 cut(s) 1929
BaeGI GKGCMC 1 cut(s) 432
BaeI ACNNNNGTAYC 2 cut(s) 201, 234
BanI GGYRCC 3 cut(s) 91, 217, 457
BanII GRGCYC 2 cut(s) 432, 1591
BauI CACGAG 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 1591
BbvI GCAGC 2 cut(s) 301, 1481
BccI CCATC 5 cut(s) 104, 811, 1135, 1452, 1724
BceAI ACGGC 3 cut(s) 261, 494, 1694
BcgI CGANNNNNNTGC 2 cut(s) 1535, 1569
BciT130I CCWGG 1 cut(s) 1537
BclI TGATCA 1 cut(s) 1333
BcnI CCSGG 2 cut(s) 523, 1895
BcoDI GTCTC 1 cut(s) 71
BfaI CTAG 6 cut(s) 42, 527, 915, 984, 1659, 1916
BfuAI ACCTGC 1 cut(s) 319
BglII AGATCT 1 cut(s) 38
BisI GCNGC 5 cut(s) 249, 315, 390, 1470, 1995
BlpI GCTNAGC 1 cut(s) 1590
BlsI GCNGC 5 cut(s) 250, 316, 391, 1471, 1996
Bme1390I CCNGG 3 cut(s) 523, 1537, 1895
Bme18I GGWCC 3 cut(s) 1199, 1475, 1765
BmgT120I GGNCC 6 cut(s) 428, 429, 507, 1199, 1475, 1765
BmiI GGNNCC 6 cut(s) 93, 219, 430, 459, 1200, 1766
BmrFI CCNGG 3 cut(s) 523, 1537, 1895
BmsI GCATC 2 cut(s) 1140, 1933
BoxI GACNNNNGTC 1 cut(s) 178
BplI GAGNNNNNCTC 4 cut(s) 131, 163, 1865, 1897
BpmI CTGGAG 1 cut(s) 1558
Bpu10I CCTNAGC 1 cut(s) 1421
Bpu1102I GCTNAGC 1 cut(s) 1590
BpuMI CCSGG 2 cut(s) 523, 1895
BsaAI YACGTR 3 cut(s) 639, 702, 765
BsaBI GATNNNNATC 1 cut(s) 1734
BsaWI WCCGGW 1 cut(s) 73
Bsc4I CCNNNNNNNGG 9 cut(s) 26, 153, 156, 437, 438, 970, 1354, 1762, 1930
Bse118I RCCGGY 1 cut(s) 277
Bse1I ACTGG 1 cut(s) 1793
Bse21I CCTNAGG 1 cut(s) 1929
Bse3DI GCAATG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 1734
BseBI CCWGG 1 cut(s) 1537
BseJI GATNNNNATC 1 cut(s) 1734
BseLI CCNNNNNNNGG 9 cut(s) 26, 153, 156, 437, 438, 970, 1354, 1762, 1930
BseMI GCAATG 1 cut(s) 432
BseMII CTCAG 5 cut(s) 95, 138, 570, 1604, 1943
BseNI ACTGG 1 cut(s) 1793
BseRI GAGGAG 3 cut(s) 1196, 1242, 1873
BseSI GKGCMC 1 cut(s) 432
BseXI GCAGC 2 cut(s) 301, 1481
BseYI CCCAGC 3 cut(s) 437, 1105, 1145
BsgI GTGCAG 1 cut(s) 300
Bsh1236I CGCG 1 cut(s) 1099
Bsh1285I CGRYCG 2 cut(s) 182, 267
BshFI GGCC 5 cut(s) 251, 389, 430, 509, 535
BshNI GGYRCC 3 cut(s) 91, 217, 457
BsiEI CGRYCG 2 cut(s) 182, 267
BsiHKAI GWGCWC 1 cut(s) 1591
BsiSI CCGG 4 cut(s) 74, 278, 522, 1895
BslFI GGGAC 2 cut(s) 134, 1076
BslI CCNNNNNNNGG 9 cut(s) 26, 153, 156, 437, 438, 970, 1354, 1762, 1930
BsmAI GTCTC 1 cut(s) 71
BsmFI GGGAC 2 cut(s) 134, 1076
BsmI GAATGC 2 cut(s) 236, 307
BsnI GGCC 5 cut(s) 251, 389, 430, 509, 535
Bsp120I GGGCCC 1 cut(s) 428
Bsp1286I GDGCHC 2 cut(s) 432, 1591
Bsp143I GATC 4 cut(s) 38, 1333, 1480, 1735
Bsp1720I GCTNAGC 1 cut(s) 1590
BspANI GGCC 5 cut(s) 251, 389, 430, 509, 535
BspCNI CTCAG 5 cut(s) 94, 137, 571, 1603, 1942
BspFNI CGCG 1 cut(s) 1099
BspHI TCATGA 1 cut(s) 1870
BspLI GGNNCC 6 cut(s) 93, 219, 430, 459, 1200, 1766
BspMI ACCTGC 1 cut(s) 319
BspPI GGATC 1 cut(s) 1475
BspT107I GGYRCC 3 cut(s) 91, 217, 457
BsrDI GCAATG 1 cut(s) 432
BsrFI RCCGGY 1 cut(s) 277
BsrI ACTGG 1 cut(s) 1793
BssAI RCCGGY 1 cut(s) 277
BssMI GATC 4 cut(s) 38, 1333, 1480, 1735
BssSI CACGAG 1 cut(s) 318
Bst2BI CACGAG 1 cut(s) 318
Bst2UI CCWGG 1 cut(s) 1537
Bst4CI ACNGT 3 cut(s) 180, 362, 690
Bst6I CTCTTC 4 cut(s) 132, 1404, 1422, 1891
BstBAI YACGTR 3 cut(s) 639, 702, 765
BstDEI CTNAG 7 cut(s) 81, 124, 474, 579, 1421, 1590, 1929
BstENI CCTNNNNNAGG 3 cut(s) 968, 1352, 1928
BstFNI CGCG 1 cut(s) 1099
BstHHI GCGC 3 cut(s) 325, 1036, 1105
BstKTI GATC 4 cut(s) 41, 1336, 1483, 1738
BstMAI GTCTC 1 cut(s) 71
BstMBI GATC 4 cut(s) 38, 1333, 1480, 1735
BstMCI CGRYCG 2 cut(s) 182, 267
BstMWI GCNNNNNNNGC 7 cut(s) 302, 311, 320, 427, 532, 960, 1595
BstNI CCWGG 1 cut(s) 1537
BstNSI RCATGY 7 cut(s) 646, 709, 772, 835, 898, 963, 1034
BstPAI GACNNNNGTC 1 cut(s) 178
BstSCI CCNGG 3 cut(s) 521, 1535, 1893
BstSLI GKGCMC 1 cut(s) 432
BstSNI TACGTA 1 cut(s) 639
BstUI CGCG 1 cut(s) 1099
BstV1I GCAGC 2 cut(s) 301, 1481
BstX2I RGATCY 1 cut(s) 38
BstYI RGATCY 1 cut(s) 38
Bsu36I CCTNAGG 1 cut(s) 1929
BsuRI GGCC 5 cut(s) 251, 389, 430, 509, 535
BtsIMutI CAGTG 1 cut(s) 367
BveI ACCTGC 1 cut(s) 319
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 3 cut(s) 325, 1036, 1105
Cfr10I RCCGGY 1 cut(s) 277
Cfr13I GGNCC 6 cut(s) 428, 429, 507, 1199, 1475, 1765
CseI GACGC 3 cut(s) 472, 909, 1531
Csp6I GTAC 8 cut(s) 92, 218, 399, 640, 762, 1269, 1307, 1827
CspCI CAANNNNNGTGG 2 cut(s) 406, 441
CviQI GTAC 8 cut(s) 92, 218, 399, 640, 762, 1269, 1307, 1827
DdeI CTNAG 7 cut(s) 81, 124, 474, 579, 1421, 1590, 1929
DpnI GATC 4 cut(s) 40, 1335, 1482, 1737
DpnII GATC 4 cut(s) 38, 1333, 1480, 1735
DraI TTTAAA 3 cut(s) 813, 936, 945
EaeI YGGCCR 1 cut(s) 387
Eam1104I CTCTTC 4 cut(s) 132, 1404, 1422, 1891
EarI CTCTTC 4 cut(s) 132, 1404, 1422, 1891
Ecl136II GAGCTC 1 cut(s) 1589
Eco105I TACGTA 1 cut(s) 639
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 2 cut(s) 432, 1591
Eco47I GGWCC 3 cut(s) 1199, 1475, 1765
Eco53kI GAGCTC 1 cut(s) 1589
Eco57I CTGAAG 1 cut(s) 426
Eco81I CCTNAGG 1 cut(s) 1929
EcoICRI GAGCTC 1 cut(s) 1589
EcoNI CCTNNNNNAGG 3 cut(s) 968, 1352, 1928
EcoRI GAATTC 3 cut(s) 256, 616, 805
EcoRII CCWGG 1 cut(s) 1535
EcoT22I ATGCAT 6 cut(s) 561, 711, 774, 837, 896, 900
EcoT38I GRGCYC 2 cut(s) 432, 1591
FaqI GGGAC 2 cut(s) 134, 1076
FauI CCCGC 3 cut(s) 498, 1621, 1674
FbaI TGATCA 1 cut(s) 1333
Fnu4HI GCNGC 5 cut(s) 249, 315, 390, 1470, 1995
FriOI GRGCYC 2 cut(s) 432, 1591
Fsp4HI GCNGC 5 cut(s) 249, 315, 390, 1470, 1995
FspAI RTGCGCAY 1 cut(s) 1035
FspBI CTAG 6 cut(s) 42, 527, 915, 984, 1659, 1916
FspI TGCGCA 1 cut(s) 1035
GlaI GCGC 3 cut(s) 324, 1035, 1104
GluI GCNGC 5 cut(s) 249, 315, 390, 1470, 1995
GsaI CCCAGC 3 cut(s) 441, 1109, 1149
GsuI CTGGAG 1 cut(s) 1558
HaeIII GGCC 5 cut(s) 251, 389, 430, 509, 535
HapII CCGG 4 cut(s) 74, 278, 522, 1895
HgaI GACGC 3 cut(s) 472, 909, 1531
HhaI GCGC 3 cut(s) 325, 1036, 1105
Hin6I GCGC 3 cut(s) 323, 1034, 1103
HinP1I GCGC 3 cut(s) 323, 1034, 1103
HincII GTYRAC 4 cut(s) 358, 367, 412, 1647
HindII GTYRAC 4 cut(s) 358, 367, 412, 1647
HindIII AAGCTT 1 cut(s) 1075
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 4 cut(s) 74, 278, 522, 1895
HphI GGTGA 4 cut(s) 644, 833, 1573, 1745
Hpy166II GTNNAC 7 cut(s) 358, 367, 412, 1025, 1209, 1647, 1827
Hpy188III TCNNGA 7 cut(s) 11, 42, 539, 1696, 1871, 1906, 1916
Hpy8I GTNNAC 7 cut(s) 358, 367, 412, 1025, 1209, 1647, 1827
Hpy99I CGWCG 4 cut(s) 180, 265, 466, 1547
HpyCH4III ACNGT 3 cut(s) 180, 362, 690
HpyCH4IV ACGT 4 cut(s) 638, 701, 764, 1309
HpyF10VI GCNNNNNNNGC 7 cut(s) 302, 311, 320, 427, 532, 960, 1595
HpyF3I CTNAG 7 cut(s) 81, 124, 474, 579, 1421, 1590, 1929
HpySE526I ACGT 4 cut(s) 638, 701, 764, 1309
HspAI GCGC 3 cut(s) 323, 1034, 1103
KpnI GGTACC 2 cut(s) 95, 221
KroI GCCGGC 1 cut(s) 277
KroNI GCCGGC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 1333
KspAI GTTAAC 1 cut(s) 412
Kzo9I GATC 4 cut(s) 38, 1333, 1480, 1735
LmnI GCTCC 3 cut(s) 13, 1539, 1969
Lsp1109I GCAGC 2 cut(s) 301, 1481
LweI GCATC 2 cut(s) 1140, 1933
MaeI CTAG 6 cut(s) 42, 527, 915, 984, 1659, 1916
MaeII ACGT 4 cut(s) 638, 701, 764, 1309
MaeIII GTNAC 4 cut(s) 697, 1161, 1674, 1769
MalI GATC 4 cut(s) 40, 1335, 1482, 1737
MboI GATC 4 cut(s) 38, 1333, 1480, 1735
MflI RGATCY 1 cut(s) 38
MhlI GDGCHC 2 cut(s) 432, 1591
MlyI GAGTC 6 cut(s) 73, 116, 149, 360, 505, 1439
MmeI TCCRAC 3 cut(s) 44, 362, 1233
Mph1103I ATGCAT 6 cut(s) 561, 711, 774, 837, 896, 900
MroNI GCCGGC 1 cut(s) 277
MroXI GAANNNNTTC 1 cut(s) 1923
MslI CAYNNNNRTG 1 cut(s) 1035
MspA1I CMGCKG 4 cut(s) 269, 392, 404, 1472
MspI CCGG 4 cut(s) 74, 278, 522, 1895
MspR9I CCNGG 3 cut(s) 523, 1537, 1895
Mva1269I GAATGC 2 cut(s) 236, 307
MvaI CCWGG 1 cut(s) 1537
MvnI CGCG 1 cut(s) 1099
MwoI GCNNNNNNNGC 7 cut(s) 302, 311, 320, 427, 532, 960, 1595
NaeI GCCGGC 1 cut(s) 279
NciI CCSGG 2 cut(s) 523, 1895
NdeII GATC 4 cut(s) 38, 1333, 1480, 1735
NgoMIV GCCGGC 1 cut(s) 277
NlaIV GGNNCC 6 cut(s) 93, 219, 430, 459, 1200, 1766
NsbI TGCGCA 1 cut(s) 1035
NsiI ATGCAT 6 cut(s) 561, 711, 774, 837, 896, 900
NspI RCATGY 7 cut(s) 646, 709, 772, 835, 898, 963, 1034
PaeI GCATGC 4 cut(s) 709, 772, 898, 1034
PagI TCATGA 1 cut(s) 1870
PceI AGGCCT 1 cut(s) 535
PciI ACATGT 1 cut(s) 642
PctI GAATGC 2 cut(s) 236, 307
PdiI GCCGGC 1 cut(s) 279
PdmI GAANNNNTTC 1 cut(s) 1923
PfeI GAWTC 4 cut(s) 548, 1009, 1285, 1610
PflFI GACNNNGTC 1 cut(s) 82
PfoI TCCNGGA 1 cut(s) 1893
PkrI GCNGC 5 cut(s) 250, 316, 391, 1471, 1996
PleI GAGTC 6 cut(s) 73, 116, 148, 359, 504, 1438
PpsI GAGTC 6 cut(s) 73, 116, 148, 359, 504, 1438
Ppu21I YACGTR 3 cut(s) 639, 702, 765
PscI ACATGT 1 cut(s) 642
PshAI GACNNNNGTC 1 cut(s) 178
Psp124BI GAGCTC 1 cut(s) 1591
Psp6I CCWGG 1 cut(s) 1535
PspFI CCCAGC 3 cut(s) 437, 1105, 1145
PspGI CCWGG 1 cut(s) 1535
PspN4I GGNNCC 6 cut(s) 93, 219, 430, 459, 1200, 1766
PspOMI GGGCCC 1 cut(s) 428
PspPI GGNCC 6 cut(s) 428, 429, 507, 1199, 1475, 1765
PsuI RGATCY 1 cut(s) 38
PsyI GACNNNGTC 1 cut(s) 82
PvuII CAGCTG 2 cut(s) 404, 1472
RsaI GTAC 8 cut(s) 93, 219, 400, 641, 763, 1270, 1308, 1828
RsaNI GTAC 8 cut(s) 92, 218, 399, 640, 762, 1269, 1307, 1827
RseI CAYNNNNRTG 1 cut(s) 1035
SacI GAGCTC 1 cut(s) 1591
SatI GCNGC 5 cut(s) 249, 315, 390, 1470, 1995
Sau3AI GATC 4 cut(s) 38, 1333, 1480, 1735
Sau96I GGNCC 6 cut(s) 428, 429, 507, 1199, 1475, 1765
SchI GAGTC 6 cut(s) 73, 116, 149, 360, 505, 1439
ScrFI CCNGG 3 cut(s) 523, 1537, 1895
SduI GDGCHC 2 cut(s) 432, 1591
SfaNI GCATC 2 cut(s) 1140, 1933
SinI GGWCC 3 cut(s) 1199, 1475, 1765
SmiMI CAYNNNNRTG 1 cut(s) 1035
SnaBI TACGTA 1 cut(s) 639
SphI GCATGC 4 cut(s) 709, 772, 898, 1034
SseBI AGGCCT 1 cut(s) 535
SspI AATATT 1 cut(s) 1852
SspMI CTAG 6 cut(s) 42, 527, 915, 984, 1659, 1916
SstI GAGCTC 1 cut(s) 1591
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 3 cut(s) 521, 1535, 1893
TaaI ACNGT 3 cut(s) 180, 362, 690
TaiI ACGT 4 cut(s) 641, 704, 767, 1312
TaqI TCGA 2 cut(s) 260, 1545
TauI GCSGC 2 cut(s) 251, 392
TfiI GAWTC 4 cut(s) 548, 1009, 1285, 1610
TscAI CASTG 1 cut(s) 367
TseI GCWGC 3 cut(s) 314, 1469, 1994
TspGWI ACGGA 4 cut(s) 227, 251, 1757, 1844
TspRI CASTG 1 cut(s) 367
Tth111I GACNNNGTC 1 cut(s) 82
VpaK11BI GGWCC 3 cut(s) 1199, 1475, 1765
XagI CCTNNNNNAGG 3 cut(s) 968, 1352, 1928
XapI RAATTY 5 cut(s) 256, 616, 805, 1245, 1403
XbaI TCTAGA 2 cut(s) 41, 1915
XceI RCATGY 7 cut(s) 646, 709, 772, 835, 898, 963, 1034
XcmI CCANNNNNNNNNTGG 1 cut(s) 1209
XmnI GAANNNNTTC 1 cut(s) 1923
XspI CTAG 6 cut(s) 42, 527, 915, 984, 1659, 1916
Zsp2I ATGCAT 6 cut(s) 561, 711, 774, 837, 896, 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.