ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 99 |
| AciI | CCGC | 1 cut(s) | 76 |
| AcsI | RAATTY | 2 cut(s) | 135, 149 |
| AcuI | CTGAAG | 1 cut(s) | 247 |
| AfaI | GTAC | 1 cut(s) | 379 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 56, 292 |
| AgsI | TTSAA | 2 cut(s) | 178, 440 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 318, 350 |
| AleI | CACNNNNGTG | 1 cut(s) | 356 |
| AluBI | AGCT | 1 cut(s) | 411 |
| AluI | AGCT | 1 cut(s) | 411 |
| Alw26I | GTCTC | 1 cut(s) | 398 |
| ApoI | RAATTY | 2 cut(s) | 135, 149 |
| AseI | ATTAAT | 1 cut(s) | 417 |
| AspS9I | GGNCC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 2 cut(s) | 107, 188 |
| AvaII | GGWCC | 1 cut(s) | 59 |
| BccI | CCATC | 1 cut(s) | 315 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BcoDI | GTCTC | 1 cut(s) | 398 |
| BfaI | CTAG | 2 cut(s) | 162, 212 |
| BfuAI | ACCTGC | 1 cut(s) | 99 |
| Bme18I | GGWCC | 1 cut(s) | 59 |
| BmgT120I | GGNCC | 1 cut(s) | 59 |
| BmiI | GGNNCC | 1 cut(s) | 284 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 84, 114, 241, 271 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 56, 292 |
| BseGI | GGATG | 2 cut(s) | 10, 326 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 56, 292 |
| BseMII | CTCAG | 1 cut(s) | 69 |
| BseRI | GAGGAG | 1 cut(s) | 262 |
| BsgI | GTGCAG | 1 cut(s) | 382 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 56, 292 |
| BsmAI | GTCTC | 1 cut(s) | 398 |
| Bsp143I | GATC | 2 cut(s) | 193, 433 |
| BspACI | CCGC | 1 cut(s) | 76 |
| BspCNI | CTCAG | 1 cut(s) | 68 |
| BspLI | GGNNCC | 1 cut(s) | 284 |
| BspMI | ACCTGC | 1 cut(s) | 99 |
| BssMI | GATC | 2 cut(s) | 193, 433 |
| Bst6I | CTCTTC | 2 cut(s) | 221, 239 |
| BstDEI | CTNAG | 1 cut(s) | 55 |
| BstF5I | GGATG | 2 cut(s) | 10, 326 |
| BstKTI | GATC | 2 cut(s) | 196, 436 |
| BstMAI | GTCTC | 1 cut(s) | 398 |
| BstMBI | GATC | 2 cut(s) | 193, 433 |
| BtsCI | GGATG | 2 cut(s) | 10, 326 |
| BtsI | GCAGTG | 2 cut(s) | 346, 391 |
| BtsIMutI | CAGTG | 2 cut(s) | 346, 391 |
| BveI | ACCTGC | 1 cut(s) | 99 |
| Cfr13I | GGNCC | 1 cut(s) | 59 |
| Csp6I | GTAC | 1 cut(s) | 378 |
| CviJI | RGCY | 5 cut(s) | 9, 166, 181, 283, 411 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 166, 181, 283, 411 |
| CviQI | GTAC | 1 cut(s) | 378 |
| DdeI | CTNAG | 1 cut(s) | 55 |
| DpnI | GATC | 2 cut(s) | 195, 435 |
| DpnII | GATC | 2 cut(s) | 193, 433 |
| Eam1104I | CTCTTC | 2 cut(s) | 221, 239 |
| EarI | CTCTTC | 2 cut(s) | 221, 239 |
| Eco47I | GGWCC | 1 cut(s) | 59 |
| Eco57I | CTGAAG | 1 cut(s) | 247 |
| EcoO109I | RGGNCCY | 1 cut(s) | 59 |
| FaiI | YATR | 2 cut(s) | 45, 280 |
| FauI | CCCGC | 1 cut(s) | 69 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FokI | GGATG | 2 cut(s) | 17, 333 |
| FspBI | CTAG | 2 cut(s) | 162, 212 |
| HindIII | AAGCTT | 1 cut(s) | 409 |
| HinfI | GANTC | 2 cut(s) | 440, 446 |
| HphI | GGTGA | 2 cut(s) | 107, 188 |
| Hpy188I | TCNGA | 3 cut(s) | 266, 287, 445 |
| Hpy188III | TCNNGA | 4 cut(s) | 57, 212, 352, 437 |
| Hpy99I | CGWCG | 1 cut(s) | 261 |
| HpyAV | CCTTC | 5 cut(s) | 164, 209, 349, 358, 394 |
| HpyCH4IV | ACGT | 2 cut(s) | 256, 328 |
| HpyCH4V | TGCA | 3 cut(s) | 108, 223, 363 |
| HpyF3I | CTNAG | 1 cut(s) | 55 |
| HpySE526I | ACGT | 2 cut(s) | 256, 328 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 2 cut(s) | 193, 433 |
| LmnI | GCTCC | 1 cut(s) | 288 |
| LpnPI | CCDG | 3 cut(s) | 42, 94, 103 |
| MaeI | CTAG | 2 cut(s) | 162, 212 |
| MaeII | ACGT | 2 cut(s) | 256, 328 |
| MaeIII | GTNAC | 1 cut(s) | 341 |
| MalI | GATC | 2 cut(s) | 195, 435 |
| MboI | GATC | 2 cut(s) | 193, 433 |
| MboII | GAAGA | 4 cut(s) | 200, 238, 253, 256 |
| MmeI | TCCRAC | 2 cut(s) | 93, 375 |
| MnlI | CCTC | 5 cut(s) | 80, 86, 240, 243, 265 |
| MseI | TTAA | 3 cut(s) | 143, 413, 417 |
| MslI | CAYNNNNRTG | 1 cut(s) | 356 |
| NdeII | GATC | 2 cut(s) | 193, 433 |
| NlaIV | GGNNCC | 1 cut(s) | 284 |
| NmuCI | GTSAC | 1 cut(s) | 341 |
| OliI | CACNNNNGTG | 1 cut(s) | 356 |
| PacI | TTAATTAA | 1 cut(s) | 417 |
| PfeI | GAWTC | 2 cut(s) | 440, 446 |
| PpuMI | RGGWCCY | 1 cut(s) | 59 |
| PshBI | ATTAAT | 1 cut(s) | 417 |
| Psp5II | RGGWCCY | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 1 cut(s) | 284 |
| PspPI | GGNCC | 1 cut(s) | 59 |
| PspPPI | RGGWCCY | 1 cut(s) | 59 |
| RsaI | GTAC | 1 cut(s) | 379 |
| RsaNI | GTAC | 1 cut(s) | 378 |
| RseI | CAYNNNNRTG | 1 cut(s) | 356 |
| SaqAI | TTAA | 3 cut(s) | 143, 413, 417 |
| Sau3AI | GATC | 2 cut(s) | 193, 433 |
| Sau96I | GGNCC | 1 cut(s) | 59 |
| SinI | GGWCC | 1 cut(s) | 59 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 356 |
| SsiI | CCGC | 1 cut(s) | 76 |
| SspMI | CTAG | 2 cut(s) | 162, 212 |
| TaiI | ACGT | 2 cut(s) | 259, 331 |
| TatI | WGTACW | 1 cut(s) | 377 |
| TfiI | GAWTC | 2 cut(s) | 440, 446 |
| Tru1I | TTAA | 3 cut(s) | 143, 413, 417 |
| Tru9I | TTAA | 3 cut(s) | 143, 413, 417 |
| TscAI | CASTG | 2 cut(s) | 346, 391 |
| TseFI | GTSAC | 1 cut(s) | 341 |
| Tsp45I | GTSAC | 1 cut(s) | 341 |
| TspRI | CASTG | 2 cut(s) | 346, 391 |
| VpaK11BI | GGWCC | 1 cut(s) | 59 |
| VspI | ATTAAT | 1 cut(s) | 417 |
| XapI | RAATTY | 2 cut(s) | 135, 149 |
| XbaI | TCTAGA | 1 cut(s) | 211 |
| XspI | CTAG | 2 cut(s) | 162, 212 |