Rmu_sc0011615.1_g000002

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011615.1
OG0000619
Physical Location & Seq
Reverse (-)
3110 .. 4722
1613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011615.1_g000002.1.cds

Sequence Viewer

Length: 1365 bp
atgacttcgggtttggaaactacttcgggaatagattcagtcattgatagtggatcagatctgaaaccagcattgatggctgataggtctagttttggaatgcttgctctgagtttgatcttaggaaggatgtggactgatttgggctcccagagtttggagcatgattgtagtctcccatcattgggggcggaaagtaagatcaagaaaaccgagttgactttggaggggtccttagatttggggacagctggcagccatcatgatggtaattctgtatctttgggggatggagatgggctttctctaacagggtctgatcatgggctcctaactaaatctcaagagactgggcttgagacaagtgattctgcaaatggggctgtgacaattcactctgggccctttgtaagtatgactttggcaagtgaggctgatccggaaaggtgtgtagaagtggagggagctcatccacaggtcgggatgtccccaacaatcaaggggcctgctgcaaacaagggtgtggtcactatacggggagttaagttgggtggtaataagaagaagggagcttccaagttttttaagaaggttgttggaattgggaaccccgggacagtaacagggcttaaagggatagtatccctcaaccttcccaaagtaatctttcttagtgaaacctggtgtacagagaatgagctgaatggtgttagtgatcagttggggtggagaaatgcagtttacagtgatgaagttaaggtgtccctccaatcactatcagagagtcatattgatgtggttgttggctccgttggtgaacccgattgttggcgtttcactgggttatatggccaacctagagctgagaacaggcaacgaacgtggaacttactgcgacagctttgtatgcagggcaatcttccatgggtggtcgggggtgattataatgagatttgtgtggcggccgacaagttgggtggtgccctgagatgtgctacagagatgaataacatgcatgcggctctggcattctgtgagttaggagatattcagtgtgttggcccaagattaacgtggagtggtataaggcatctcaatccaagcgttttcgaccatctgccaatcatgttggagatcagagctcagaaaaaacgtagaaaaaagaggacgaggagatttaaattcgaggagttttggttattggaggagaagtgcaaggagatagttagagactgctggggtagtttgaatggtgttagtgtgtttacttctttgtgtcataagcttaatcggactcgtgatgtactggagtcctggagtcaggagagttttcatggtttaaggaaagatattgagaaagtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

454

Amino Acids

49.31

Weight (kDa)

6.48

Isoelectric Point (pI)

32.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000619)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29861 FvH4_3g26084 FvH4_3g32551 FvH4_4g08193 FvH4_4g12950 FvH4_6g29733
rosa_chinensis RchiOBHm_Chr3g0488921
rosa_multiflora Rmu_co8238041.1_g000001 Rmu_co8265215.1_g000001 Rmu_co8486357.1_g000002 Rmu_sc0000389.1_g000016 Rmu_sc0000580.1_g000123 Rmu_sc0000789.1_g000005 Rmu_sc0001043.1_g000006 Rmu_sc0001208.1_g000001 Rmu_sc0001323.1_g000011 Rmu_sc0001636.1_g000001 Rmu_sc0001911.1_g000023 Rmu_sc0001940.1_g000010 Rmu_sc0002531.1_g000047 Rmu_sc0002715.1_g000007 Rmu_sc0002833.1_g000024 Rmu_sc0003859.1_g000046 Rmu_sc0003894.1_g000008 Rmu_sc0004744.1_g000008 Rmu_sc0004924.1_g000016 Rmu_sc0004991.1_g000004 Rmu_sc0005149.1_g000010 Rmu_sc0005149.1_g000011 Rmu_sc0005489.1_g000007 Rmu_sc0005592.1_g000030 Rmu_sc0005813.1_g000010 Rmu_sc0005813.1_g000011 Rmu_sc0005861.1_g000009 Rmu_sc0005949.1_g000016 Rmu_sc0006824.1_g000021 Rmu_sc0007069.1_g000025 Rmu_sc0008002.1_g000008 Rmu_sc0008148.1_g000008 Rmu_sc0008280.1_g000001 Rmu_sc0008317.1_g000010 Rmu_sc0011615.1_g000002 Rmu_sc0013925.1_g000004 Rmu_sc0014130.1_g000003 Rmu_sc0014510.1_g000008 Rmu_sc0016640.1_g000001 Rmu_sc0018068.1_g000002 Rmu_sc0021371.1_g000006 Rmu_sc0028652.1_g000007 Rmu_sc0032187.1_g000002 Rmu_sc0034241.1_g000001 Rmu_ssc0000127.1_g000003
rosa_roxburghii Rroxscaffold_6G00403950
rosa_rugosa Rorug01G0081700 Rorug02G0544000 Rorug05G0089900 Rorug05G0284500 Rorug05G0452400 Rorug07G0003400 Rorug07G0003400 Rorug07G0129200 Rorug07G0210600
rosa_samantha Rh1AG193900 Rh1AG194000 Rh1DG063400 Rh1DG204700 Rh2AG364300 Rh3BG140200 Rh3CG366000 Rh4DG342600 Rh5AG347700 Rh5BG437300 Rh5CG459900 Rh5DG127400 Rh5DG412800 Rh6BG381500 Rh7CG520500 Rh7DG241900 Rh7DG336000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 945
AccB1I GGYRCC 1 cut(s) 980
AccB7I CCANNNNNTGG 1 cut(s) 157
AccIII TCCGGA 1 cut(s) 439
AciI CCGC 3 cut(s) 191, 962, 1019
AclWI GGATC 2 cut(s) 61, 431
AcoI YGGCCR 2 cut(s) 850, 963
AcsI RAATTY 1 cut(s) 1181
AfaI GTAC 2 cut(s) 688, 1305
AfiI CCNNNNNNNGG 5 cut(s) 157, 184, 185, 479, 828
AgsI TTSAA 1 cut(s) 1249
AjnI CCWGG 2 cut(s) 680, 1313
AluBI AGCT 8 cut(s) 251, 467, 572, 700, 863, 901, 1142, 1285
AluI AGCT 8 cut(s) 251, 467, 572, 700, 863, 901, 1142, 1285
Alw21I GWGCWC 2 cut(s) 469, 1144
Alw26I GTCTC 4 cut(s) 179, 341, 353, 1224
AlwI GGATC 2 cut(s) 61, 431
AlwNI CAGNNNCTG 1 cut(s) 317
Ama87I CYCGRG 1 cut(s) 611
Aor13HI TCCGGA 1 cut(s) 439
AoxI GGCC 5 cut(s) 401, 503, 850, 963, 1060
ApaI GGGCCC 1 cut(s) 405
ApeKI GCWGC 2 cut(s) 255, 509
ApoI RAATTY 1 cut(s) 1181
ArsI GACNNNNNNTTYG 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 34
AspS9I GGNCC 5 cut(s) 231, 401, 402, 503, 1061
AsuC2I CCSGG 2 cut(s) 612, 613
AsuHPI GGTGA 2 cut(s) 827, 950
AvaI CYCGRG 1 cut(s) 611
AvaII GGWCC 1 cut(s) 231
BaeGI GKGCMC 2 cut(s) 405, 985
BalI TGGCCA 1 cut(s) 852
BanI GGYRCC 1 cut(s) 980
BanII GRGCYC 5 cut(s) 149, 330, 405, 469, 1144
BauI CACGAG 1 cut(s) 1296
Bbv12I GWGCWC 2 cut(s) 469, 1144
BbvI GCAGC 2 cut(s) 267, 496
BccI CCATC 7 cut(s) 70, 187, 260, 267, 284, 290, 1122
BciT130I CCWGG 2 cut(s) 682, 1315
BciVI GTATCC 1 cut(s) 652
BclI TGATCA 2 cut(s) 319, 715
BcnI CCSGG 2 cut(s) 612, 613
BcoDI GTCTC 4 cut(s) 179, 341, 353, 1224
BfaI CTAG 2 cut(s) 90, 858
BfmI CTRYAG 1 cut(s) 996
BfuI GTATCC 1 cut(s) 652
BglII AGATCT 1 cut(s) 58
BisI GCNGC 4 cut(s) 256, 510, 963, 1020
BlsI GCNGC 4 cut(s) 257, 511, 964, 1021
Bme1390I CCNGG 4 cut(s) 612, 613, 682, 1315
Bme18I GGWCC 1 cut(s) 231
BmeT110I CYCGRG 1 cut(s) 611
BmgT120I GGNCC 5 cut(s) 231, 401, 402, 503, 1061
BmiI GGNNCC 8 cut(s) 148, 232, 329, 403, 504, 608, 808, 982
BmrFI CCNGG 4 cut(s) 612, 613, 682, 1315
BmrI ACTGGG 2 cut(s) 360, 849
BmsI GCATC 1 cut(s) 1099
BmuI ACTGGG 2 cut(s) 360, 849
BpmI CTGGAG 2 cut(s) 1328, 1336
BpuEI CTTGAG 2 cut(s) 327, 377
BpuMI CCSGG 2 cut(s) 612, 613
BsaJI CCNNGG 3 cut(s) 610, 611, 923
BsaWI WCCGGW 1 cut(s) 439
BsaXI ACNNNNNCTCC 4 cut(s) 1181, 1196, 1211, 1226
Bsc4I CCNNNNNNNGG 5 cut(s) 157, 184, 185, 479, 828
Bse1I ACTGG 3 cut(s) 355, 844, 1311
BseAI TCCGGA 1 cut(s) 439
BseBI CCWGG 2 cut(s) 682, 1315
BseDI CCNNGG 3 cut(s) 610, 611, 923
BseGI GGATG 4 cut(s) 135, 295, 469, 489
BseLI CCNNNNNNNGG 5 cut(s) 157, 184, 185, 479, 828
BseMII CTCAG 4 cut(s) 101, 855, 977, 1157
BseNI ACTGG 3 cut(s) 355, 844, 1311
BseRI GAGGAG 3 cut(s) 1186, 1202, 1220
BseSI GKGCMC 2 cut(s) 405, 985
BseX3I CGGCCG 1 cut(s) 963
BseXI GCAGC 2 cut(s) 267, 496
BseYI CCCAGC 1 cut(s) 1236
Bsh1285I CGRYCG 1 cut(s) 966
BshFI GGCC 5 cut(s) 403, 505, 852, 965, 1062
BshNI GGYRCC 1 cut(s) 980
BsiEI CGRYCG 1 cut(s) 966
BsiHKAI GWGCWC 2 cut(s) 469, 1144
BsiHKCI CYCGRG 1 cut(s) 611
BsiSI CCGG 2 cut(s) 440, 612
BslFI GGGAC 4 cut(s) 259, 472, 628, 748
BslI CCNNNNNNNGG 5 cut(s) 157, 184, 185, 479, 828
BsmAI GTCTC 4 cut(s) 179, 341, 353, 1224
BsmFI GGGAC 4 cut(s) 259, 472, 628, 748
BsmI GAATGC 2 cut(s) 105, 1028
BsnI GGCC 5 cut(s) 403, 505, 852, 965, 1062
BsoBI CYCGRG 1 cut(s) 611
Bsp120I GGGCCC 1 cut(s) 401
Bsp1286I GDGCHC 6 cut(s) 149, 330, 405, 469, 985, 1144
Bsp13I TCCGGA 1 cut(s) 439
Bsp1407I TGTACA 1 cut(s) 686
Bsp143I GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
Bsp19I CCATGG 1 cut(s) 923
BspACI CCGC 3 cut(s) 191, 962, 1019
BspANI GGCC 5 cut(s) 403, 505, 852, 965, 1062
BspCNI CTCAG 4 cut(s) 102, 856, 978, 1156
BspEI TCCGGA 1 cut(s) 439
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 8 cut(s) 148, 232, 329, 403, 504, 608, 808, 982
BspPI GGATC 2 cut(s) 61, 431
BspT107I GGYRCC 1 cut(s) 980
BsrGI TGTACA 1 cut(s) 686
BsrI ACTGG 3 cut(s) 355, 844, 1311
BssECI CCNNGG 3 cut(s) 610, 611, 923
BssMI GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
BssSI CACGAG 1 cut(s) 1296
BssT1I CCWWGG 1 cut(s) 923
Bst2BI CACGAG 1 cut(s) 1296
Bst2UI CCWGG 2 cut(s) 682, 1315
Bst4CI ACNGT 2 cut(s) 619, 746
BstAUI TGTACA 1 cut(s) 686
BstC8I GCNNGC 4 cut(s) 105, 253, 507, 1017
BstDEI CTNAG 7 cut(s) 110, 121, 235, 671, 864, 986, 1143
BstDSI CCRYGG 1 cut(s) 923
BstF5I GGATG 4 cut(s) 135, 295, 469, 489
BstKTI GATC 8 cut(s) 56, 61, 120, 204, 322, 439, 718, 1137
BstMAI GTCTC 4 cut(s) 179, 341, 353, 1224
BstMBI GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
BstMCI CGRYCG 1 cut(s) 966
BstMWI GCNNNNNNNGC 5 cut(s) 77, 380, 431, 907, 1025
BstNI CCWGG 2 cut(s) 682, 1315
BstNSI RCATGY 2 cut(s) 1015, 1019
BstSCI CCNGG 4 cut(s) 610, 611, 680, 1313
BstSFI CTRYAG 1 cut(s) 996
BstSLI GKGCMC 2 cut(s) 405, 985
BstV1I GCAGC 2 cut(s) 267, 496
BstX2I RGATCY 1 cut(s) 58
BstXI CCANNNNNNTGG 1 cut(s) 266
BstYI RGATCY 1 cut(s) 58
BstZI CGGCCG 1 cut(s) 963
BsuI GTATCC 1 cut(s) 652
BsuRI GGCC 5 cut(s) 403, 505, 852, 965, 1062
BtgI CCRYGG 1 cut(s) 923
BtsCI GGATG 4 cut(s) 135, 295, 469, 489
BtsIMutI CAGTG 3 cut(s) 751, 837, 1058
Cac8I GCNNGC 4 cut(s) 105, 253, 507, 1017
CaiI CAGNNNCTG 1 cut(s) 317
CciI TCATGA 1 cut(s) 262
Cfr13I GGNCC 5 cut(s) 231, 401, 402, 503, 1061
Cfr9I CCCGGG 1 cut(s) 611
CsiI ACCWGGT 1 cut(s) 680
Csp6I GTAC 2 cut(s) 687, 1304
CspCI CAANNNNNGTGG 4 cut(s) 863, 898, 958, 993
CviAII CATG 8 cut(s) 164, 263, 323, 924, 1012, 1016, 1126, 1334
CviQI GTAC 2 cut(s) 687, 1304
DdeI CTNAG 7 cut(s) 110, 121, 235, 671, 864, 986, 1143
DpnI GATC 8 cut(s) 55, 60, 119, 203, 321, 438, 717, 1136
DpnII GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
DraI TTTAAA 1 cut(s) 1180
EaeI YGGCCR 2 cut(s) 850, 963
EagI CGGCCG 1 cut(s) 963
EciI GGCGGA 1 cut(s) 206
Ecl136II GAGCTC 2 cut(s) 467, 1142
EclXI CGGCCG 1 cut(s) 963
Eco130I CCWWGG 1 cut(s) 923
Eco24I GRGCYC 5 cut(s) 149, 330, 405, 469, 1144
Eco47I GGWCC 1 cut(s) 231
Eco52I CGGCCG 1 cut(s) 963
Eco53kI GAGCTC 2 cut(s) 467, 1142
Eco88I CYCGRG 1 cut(s) 611
EcoICRI GAGCTC 2 cut(s) 467, 1142
EcoO109I RGGNCCY 3 cut(s) 231, 402, 503
EcoRII CCWGG 2 cut(s) 680, 1313
EcoT14I CCWWGG 1 cut(s) 923
EcoT22I ATGCAT 1 cut(s) 1017
EcoT38I GRGCYC 5 cut(s) 149, 330, 405, 469, 1144
ErhI CCWWGG 1 cut(s) 923
FaeI CATG 8 cut(s) 167, 266, 326, 927, 1015, 1019, 1129, 1337
FalI AAGNNNNNCTT 2 cut(s) 403, 435
FaqI GGGAC 4 cut(s) 259, 472, 628, 748
FatI CATG 8 cut(s) 163, 262, 322, 923, 1011, 1015, 1125, 1333
FbaI TGATCA 2 cut(s) 319, 715
Fnu4HI GCNGC 4 cut(s) 256, 510, 963, 1020
FokI GGATG 4 cut(s) 142, 302, 456, 496
FriOI GRGCYC 5 cut(s) 149, 330, 405, 469, 1144
Fsp4HI GCNGC 4 cut(s) 256, 510, 963, 1020
FspBI CTAG 2 cut(s) 90, 858
GluI GCNGC 4 cut(s) 256, 510, 963, 1020
GsaI CCCAGC 1 cut(s) 1240
GsuI CTGGAG 2 cut(s) 1328, 1336
HaeIII GGCC 5 cut(s) 403, 505, 852, 965, 1062
HapII CCGG 2 cut(s) 440, 612
Hin1II CATG 8 cut(s) 167, 266, 326, 927, 1015, 1019, 1129, 1337
HincII GTYRAC 1 cut(s) 219
HindII GTYRAC 1 cut(s) 219
HindIII AAGCTT 1 cut(s) 1283
HinfI GANTC 6 cut(s) 35, 368, 784, 1294, 1310, 1318
HpaII CCGG 2 cut(s) 440, 612
HphI GGTGA 2 cut(s) 827, 950
Hpy166II GTNNAC 6 cut(s) 135, 219, 687, 742, 818, 1266
Hpy188I TCNGA 9 cut(s) 58, 63, 111, 319, 781, 1139, 1146, 1293, 1364
Hpy188III TCNNGA 8 cut(s) 27, 205, 263, 344, 440, 481, 1298, 1322
Hpy8I GTNNAC 6 cut(s) 135, 219, 687, 742, 818, 1266
HpyAV CCTTC 4 cut(s) 120, 559, 583, 662
HpyCH4III ACNGT 2 cut(s) 619, 746
HpyCH4IV ACGT 3 cut(s) 881, 1073, 1153
HpyCH4V TGCA 6 cut(s) 374, 512, 737, 910, 1015, 1215
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 380, 431, 907, 1025
HpyF3I CTNAG 7 cut(s) 110, 121, 235, 671, 864, 986, 1143
HpySE526I ACGT 3 cut(s) 881, 1073, 1153
Hsp92II CATG 8 cut(s) 167, 266, 326, 927, 1015, 1019, 1129, 1337
Kpn2I TCCGGA 1 cut(s) 439
Ksp22I TGATCA 2 cut(s) 319, 715
Kzo9I GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
LmnI GCTCC 6 cut(s) 152, 160, 333, 464, 569, 812
Lsp1109I GCAGC 2 cut(s) 267, 496
LweI GCATC 1 cut(s) 1099
MabI ACCWGGT 1 cut(s) 680
MaeI CTAG 2 cut(s) 90, 858
MaeII ACGT 3 cut(s) 881, 1073, 1153
MaeIII GTNAC 3 cut(s) 385, 526, 619
MalI GATC 8 cut(s) 55, 60, 119, 203, 321, 438, 717, 1136
MboI GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
MboII GAAGA 2 cut(s) 574, 911
MflI RGATCY 1 cut(s) 58
MhlI GDGCHC 6 cut(s) 149, 330, 405, 469, 985, 1144
MlsI TGGCCA 1 cut(s) 852
MluCI AATT 4 cut(s) 271, 390, 600, 1181
MluNI TGGCCA 1 cut(s) 852
MlyI GAGTC 4 cut(s) 793, 1288, 1319, 1327
MmeI TCCRAC 2 cut(s) 577, 1110
MnlI CCTC 9 cut(s) 220, 424, 454, 656, 776, 1158, 1164, 1180, 1198
Mox20I TGGCCA 1 cut(s) 852
Mph1103I ATGCAT 1 cut(s) 1017
MroI TCCGGA 1 cut(s) 439
MroXI GAANNNNTTC 1 cut(s) 34
MscI TGGCCA 1 cut(s) 852
MseI TTAA 8 cut(s) 543, 585, 630, 756, 1070, 1179, 1287, 1340
MslI CAYNNNNRTG 2 cut(s) 264, 792
Msp20I TGGCCA 1 cut(s) 852
MspA1I CMGCKG 1 cut(s) 251
MspI CCGG 2 cut(s) 440, 612
MspR9I CCNGG 4 cut(s) 612, 613, 682, 1315
Mva1269I GAATGC 2 cut(s) 105, 1028
MvaI CCWGG 2 cut(s) 682, 1315
MwoI GCNNNNNNNGC 5 cut(s) 77, 380, 431, 907, 1025
NciI CCSGG 2 cut(s) 612, 613
NcoI CCATGG 1 cut(s) 923
NdeII GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
NlaIII CATG 8 cut(s) 167, 266, 326, 927, 1015, 1019, 1129, 1337
NlaIV GGNNCC 8 cut(s) 148, 232, 329, 403, 504, 608, 808, 982
NmuCI GTSAC 2 cut(s) 385, 526
NsiI ATGCAT 1 cut(s) 1017
NspI RCATGY 2 cut(s) 1015, 1019
PaeI GCATGC 1 cut(s) 1019
PagI TCATGA 1 cut(s) 262
PctI GAATGC 2 cut(s) 105, 1028
PdmI GAANNNNTTC 1 cut(s) 34
PfeI GAWTC 2 cut(s) 35, 368
PflMI CCANNNNNTGG 1 cut(s) 157
PfoI TCCNGGA 1 cut(s) 1313
PkrI GCNGC 4 cut(s) 257, 511, 964, 1021
PleI GAGTC 4 cut(s) 792, 1288, 1318, 1326
PpsI GAGTC 4 cut(s) 792, 1288, 1318, 1326
PpuMI RGGWCCY 1 cut(s) 231
PsiI TTATAA 1 cut(s) 945
Psp124BI GAGCTC 2 cut(s) 469, 1144
Psp5II RGGWCCY 1 cut(s) 231
Psp6I CCWGG 2 cut(s) 680, 1313
PspFI CCCAGC 1 cut(s) 1236
PspGI CCWGG 2 cut(s) 680, 1313
PspN4I GGNNCC 8 cut(s) 148, 232, 329, 403, 504, 608, 808, 982
PspOMI GGGCCC 1 cut(s) 401
PspPI GGNCC 5 cut(s) 231, 401, 402, 503, 1061
PspPPI RGGWCCY 1 cut(s) 231
PstNI CAGNNNCTG 1 cut(s) 317
PsuI RGATCY 1 cut(s) 58
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 2 cut(s) 688, 1305
RsaNI GTAC 2 cut(s) 687, 1304
RseI CAYNNNNRTG 2 cut(s) 264, 792
SacI GAGCTC 2 cut(s) 469, 1144
SaqAI TTAA 8 cut(s) 543, 585, 630, 756, 1070, 1179, 1287, 1340
SatI GCNGC 4 cut(s) 256, 510, 963, 1020
Sau3AI GATC 8 cut(s) 53, 58, 117, 201, 319, 436, 715, 1134
Sau96I GGNCC 5 cut(s) 231, 401, 402, 503, 1061
SchI GAGTC 4 cut(s) 793, 1288, 1319, 1327
ScrFI CCNGG 4 cut(s) 612, 613, 682, 1315
SduI GDGCHC 6 cut(s) 149, 330, 405, 469, 985, 1144
SexAI ACCWGGT 1 cut(s) 680
SfaNI GCATC 1 cut(s) 1099
SfcI CTRYAG 1 cut(s) 996
SinI GGWCC 1 cut(s) 231
SmaI CCCGGG 1 cut(s) 613
SmiI ATTTAAAT 1 cut(s) 1180
SmiMI CAYNNNNRTG 2 cut(s) 264, 792
SmlI CTYRAG 2 cut(s) 342, 356
SmoI CTYRAG 2 cut(s) 342, 356
SphI GCATGC 1 cut(s) 1019
Sse9I AATT 4 cut(s) 271, 390, 600, 1181
SsiI CCGC 3 cut(s) 191, 962, 1019
SspMI CTAG 2 cut(s) 90, 858
SstI GAGCTC 2 cut(s) 469, 1144
StyD4I CCNGG 4 cut(s) 610, 611, 680, 1313
StyI CCWWGG 1 cut(s) 923
SwaI ATTTAAAT 1 cut(s) 1180
TaaI ACNGT 2 cut(s) 619, 746
TaiI ACGT 3 cut(s) 884, 1076, 1156
TaqI TCGA 2 cut(s) 1110, 1185
TasI AATT 4 cut(s) 271, 390, 600, 1181
TatI WGTACW 2 cut(s) 686, 1303
TauI GCSGC 2 cut(s) 965, 1022
TfiI GAWTC 2 cut(s) 35, 368
Tru1I TTAA 8 cut(s) 543, 585, 630, 756, 1070, 1179, 1287, 1340
Tru9I TTAA 8 cut(s) 543, 585, 630, 756, 1070, 1179, 1287, 1340
TscAI CASTG 3 cut(s) 751, 844, 1058
TseFI GTSAC 2 cut(s) 385, 526
TseI GCWGC 2 cut(s) 255, 509
Tsp45I GTSAC 2 cut(s) 385, 526
TspDTI ATGAA 3 cut(s) 765, 1019, 1322
TspGWI ACGGA 1 cut(s) 799
TspMI CCCGGG 1 cut(s) 611
TspRI CASTG 3 cut(s) 751, 844, 1058
Van91I CCANNNNNTGG 1 cut(s) 157
VpaK11BI GGWCC 1 cut(s) 231
XapI RAATTY 1 cut(s) 1181
XceI RCATGY 2 cut(s) 1015, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 1071
XmaI CCCGGG 1 cut(s) 611
XmnI GAANNNNTTC 1 cut(s) 34
XspI CTAG 2 cut(s) 90, 858
Zsp2I ATGCAT 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.