Rorug07G0003400

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000619
Physical Location & Seq
Forward (+)
312233 .. 316499
4267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0003400.1

Sequence Viewer

Length: 1236 bp
ATGGAGAAACCGACGACACCACCATCATCAGCTTCTTCTGTTCAAATTCATCAGGAGTCAGTTCCGACTAGTCCAACGTTGTCAAGCACAAGGAAGATGAGCTTAAGCACCGCCCCGACCACCACGGCCACCACGGCCAAACCGACCTGGCTCCTCTCCAACCTTGCCGATGTGGAAGAGAGGATGAAGATGCTAGCATTTAACAGTAACAGTAAAAGTACTAAAACTCCTCAAGATCAAGACACTGGGGACACCTTCGCGGAGCGAGCTGAAGCTTACTACAAAACACGCCCTCAGCTGCTATCCCTACTTCAAGACTTGTACAATTCCTATCTCACTCTCTCTGACCGTTACATTCAAACAATCGCCAAAACTACTAGTCTGAGTCAGAGTCAGATTTTTCATCCTCCTCGTCGACAATCTTCTCAAACCTCAACCTTTGAATACTATGATTACTATGACCAGCAAGATCAATATGAGACTAGCCAGAATGATTCAGATGTGGAGAGCTCCCTCTCGTATCAGCAATTTCCCACATCACTACTTGCTCAAGATGATGATGATGATACCACCATGGTGTCAAGTTTTGACGCAATTGTCGCGGAGATTGTGATAAAAAATGTGGAATGCGATATCCTACTTCATGAGGTCAATGCATCGGAGAGGCAACAAAATGAATCATCGAGGAAGATAGAGTTGCAGAAGAGCTTGCTTGAGGTTTTGGAGTCTGAAAGGCTCATACTACTGAATGAGAATGCTAAATTGGGTTACAGAGTGGGTGCATTGATGGAAGAGAACAAAGCGCTTGCCTCCGAGTCTCTGTTCATGAGGAGGAAGGCCGGTGAGCTAGCTAGGCATTTGCTCCAAATGAGAGAGGACCGCAGGGTCAGCATGCTCAGCCGTAAGATAGAGGACCTTCAGGGACAGATTTATGGGTTGGAGAAGCGGAACAAGGAGTACTACCAGCAACTTGTCAACAATGATCACTCACAACTAGGATCACTTGAAGAAGAGAAGAATAGTAGCAACAACAAGAAGAAGACTCGTGGTAGAAGTAGTAATGAGGTGGATTTGCACGTTTGCTTTCAAATAGGAAAGATGAAGAGGAGAGGTGGTACTGGGACGAGGACTGGTACGAAGGGTACTGGCACTGACAAGAAAGGTTCTAGTTGGTGGGGAAAGGTCAAGAACATAGACTTGTTTCTATGTGGACTTAACCCAACTTCTACTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

411

Amino Acids

46.49

Weight (kDa)

6.17

Isoelectric Point (pI)

56.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 45 - 118 7.7e-10 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000619)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29861 FvH4_3g26084 FvH4_3g32551 FvH4_4g08193 FvH4_4g12950 FvH4_6g29733
rosa_chinensis RchiOBHm_Chr3g0488921
rosa_multiflora Rmu_co8238041.1_g000001 Rmu_co8265215.1_g000001 Rmu_co8486357.1_g000002 Rmu_sc0000389.1_g000016 Rmu_sc0000580.1_g000123 Rmu_sc0000789.1_g000005 Rmu_sc0001043.1_g000006 Rmu_sc0001208.1_g000001 Rmu_sc0001323.1_g000011 Rmu_sc0001636.1_g000001 Rmu_sc0001911.1_g000023 Rmu_sc0001940.1_g000010 Rmu_sc0002531.1_g000047 Rmu_sc0002715.1_g000007 Rmu_sc0002833.1_g000024 Rmu_sc0003859.1_g000046 Rmu_sc0003894.1_g000008 Rmu_sc0004744.1_g000008 Rmu_sc0004924.1_g000016 Rmu_sc0004991.1_g000004 Rmu_sc0005149.1_g000010 Rmu_sc0005149.1_g000011 Rmu_sc0005489.1_g000007 Rmu_sc0005592.1_g000030 Rmu_sc0005813.1_g000010 Rmu_sc0005813.1_g000011 Rmu_sc0005861.1_g000009 Rmu_sc0005949.1_g000016 Rmu_sc0006824.1_g000021 Rmu_sc0007069.1_g000025 Rmu_sc0008002.1_g000008 Rmu_sc0008148.1_g000008 Rmu_sc0008280.1_g000001 Rmu_sc0008317.1_g000010 Rmu_sc0011615.1_g000002 Rmu_sc0013925.1_g000004 Rmu_sc0014130.1_g000003 Rmu_sc0014510.1_g000008 Rmu_sc0016640.1_g000001 Rmu_sc0018068.1_g000002 Rmu_sc0021371.1_g000006 Rmu_sc0028652.1_g000007 Rmu_sc0032187.1_g000002 Rmu_sc0034241.1_g000001 Rmu_ssc0000127.1_g000003
rosa_roxburghii Rroxscaffold_6G00403950
rosa_rugosa Rorug01G0081700 Rorug02G0544000 Rorug05G0089900 Rorug05G0284500 Rorug05G0452400 Rorug07G0003400 Rorug07G0003400 Rorug07G0129200 Rorug07G0210600
rosa_samantha Rh1AG193900 Rh1AG194000 Rh1DG063400 Rh1DG204700 Rh2AG364300 Rh3BG140200 Rh3CG366000 Rh4DG342600 Rh5AG347700 Rh5BG437300 Rh5CG459900 Rh5DG127400 Rh5DG412800 Rh6BG381500 Rh7CG520500 Rh7DG241900 Rh7DG336000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 596, 884
AccI GTMKAC 1 cut(s) 415
AccII CGCG 2 cut(s) 260, 602
AciI CCGC 5 cut(s) 111, 260, 602, 880, 946
AclI AACGTT 1 cut(s) 77
AclWI GGATC 1 cut(s) 1006
AcoI YGGCCR 2 cut(s) 126, 135
AcsI RAATTY 1 cut(s) 45
AcuI CTGAAG 2 cut(s) 291, 902
AfaI GTAC 6 cut(s) 220, 323, 959, 1117, 1135, 1144
AfeI AGCGCT 1 cut(s) 804
AflII CTTAAG 1 cut(s) 103
AgsI TTSAA 6 cut(s) 44, 314, 359, 443, 1007, 1088
AhlI ACTAGT 2 cut(s) 68, 377
AjnI CCWGG 1 cut(s) 146
AjuI GAANNNNNNNTTGG 2 cut(s) 746, 778
AleI CACNNNNGTG 1 cut(s) 575
AluBI AGCT 9 cut(s) 32, 102, 269, 275, 298, 510, 708, 847, 851
AluI AGCT 9 cut(s) 32, 102, 269, 275, 298, 510, 708, 847, 851
Alw21I GWGCWC 1 cut(s) 512
Alw26I GTCTC 2 cut(s) 473, 822
AlwI GGATC 1 cut(s) 1006
Aor51HI AGCGCT 1 cut(s) 804
AoxI GGCC 3 cut(s) 126, 135, 837
ApeKI GCWGC 1 cut(s) 298
ApoI RAATTY 1 cut(s) 45
AspLEI GCGC 1 cut(s) 805
AspS9I GGNCC 2 cut(s) 877, 913
AsuHPI GGTGA 1 cut(s) 854
AsuNHI GCTAGC 2 cut(s) 193, 847
AvaII GGWCC 2 cut(s) 877, 913
BanII GRGCYC 1 cut(s) 512
BauI CACGAG 1 cut(s) 1044
BbsI GAAGAC 1 cut(s) 1046
Bbv12I GWGCWC 1 cut(s) 512
BbvCI CCTCAGC 1 cut(s) 294
BbvI GCAGC 1 cut(s) 285
BccI CCATC 2 cut(s) 31, 781
BceAI ACGGC 3 cut(s) 141, 150, 885
BciT130I CCWGG 1 cut(s) 148
BclI TGATCA 1 cut(s) 982
BcoDI GTCTC 2 cut(s) 473, 822
BcuI ACTAGT 2 cut(s) 68, 377
BfaI CTAG 8 cut(s) 69, 194, 378, 483, 848, 852, 995, 1167
BfoI RGCGCY 1 cut(s) 806
BfrI CTTAAG 1 cut(s) 103
BglI GCCNNNNNGGC 1 cut(s) 134
BisI GCNGC 1 cut(s) 299
BlpI GCTNAGC 1 cut(s) 896
BlsI GCNGC 1 cut(s) 300
BmcAI AGTACT 2 cut(s) 220, 959
Bme1390I CCNGG 1 cut(s) 148
Bme18I GGWCC 2 cut(s) 877, 913
BmgT120I GGNCC 2 cut(s) 877, 913
BmiI GGNNCC 1 cut(s) 152
BmrFI CCNGG 1 cut(s) 148
BmrI ACTGGG 2 cut(s) 255, 1128
BmsI GCATC 2 cut(s) 180, 665
BmtI GCTAGC 2 cut(s) 197, 851
BmuI ACTGGG 2 cut(s) 255, 1128
BpiI GAAGAC 1 cut(s) 1046
Bpu10I CCTNAGC 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 896
BpuEI CTTGAG 3 cut(s) 216, 534, 734
BsaJI CCNNGG 3 cut(s) 123, 132, 573
BsaXI ACNNNNNCTCC 4 cut(s) 211, 241, 1099, 1129
Bse118I RCCGGY 1 cut(s) 839
Bse1I ACTGG 4 cut(s) 250, 1123, 1135, 1150
BseBI CCWGG 1 cut(s) 148
BseDI CCNNGG 3 cut(s) 123, 132, 573
BseGI GGATG 2 cut(s) 189, 403
BseMII CTCAG 3 cut(s) 308, 374, 910
BseNI ACTGG 4 cut(s) 250, 1123, 1135, 1150
BseRI GAGGAG 5 cut(s) 143, 219, 399, 844, 1120
BseXI GCAGC 1 cut(s) 285
Bsh1236I CGCG 2 cut(s) 260, 602
BshFI GGCC 3 cut(s) 128, 137, 839
BsiHKAI GWGCWC 1 cut(s) 512
BsiSI CCGG 1 cut(s) 840
BslFI GGGAC 3 cut(s) 263, 936, 1135
BsmAI GTCTC 2 cut(s) 473, 822
BsmFI GGGAC 3 cut(s) 263, 936, 1135
BsmI GAATGC 2 cut(s) 632, 760
BsnI GGCC 3 cut(s) 128, 137, 839
Bsp1286I GDGCHC 1 cut(s) 512
Bsp1407I TGTACA 1 cut(s) 321
Bsp143I GATC 4 cut(s) 235, 469, 982, 998
Bsp1720I GCTNAGC 1 cut(s) 896
Bsp19I CCATGG 1 cut(s) 573
BspACI CCGC 5 cut(s) 111, 260, 602, 880, 946
BspANI GGCC 3 cut(s) 128, 137, 839
BspCNI CTCAG 3 cut(s) 307, 375, 909
BspFNI CGCG 2 cut(s) 260, 602
BspHI TCATGA 2 cut(s) 643, 825
BspLI GGNNCC 1 cut(s) 152
BspOI GCTAGC 2 cut(s) 197, 851
BspPI GGATC 1 cut(s) 1006
BspQI GCTCTTC 1 cut(s) 698
BspTI CTTAAG 1 cut(s) 103
BsrFI RCCGGY 1 cut(s) 839
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 4 cut(s) 250, 1123, 1135, 1150
BssAI RCCGGY 1 cut(s) 839
BssECI CCNNGG 3 cut(s) 123, 132, 573
BssMI GATC 4 cut(s) 235, 469, 982, 998
BssSI CACGAG 1 cut(s) 1044
BssT1I CCWWGG 1 cut(s) 573
Bst2BI CACGAG 1 cut(s) 1044
Bst2UI CCWGG 1 cut(s) 148
Bst4CI ACNGT 3 cut(s) 206, 212, 350
Bst6I CTCTTC 5 cut(s) 171, 698, 786, 1005, 1097
BstAFI CTTAAG 1 cut(s) 103
BstAUI TGTACA 1 cut(s) 321
BstC8I GCNNGC 6 cut(s) 195, 267, 710, 807, 849, 893
BstDEI CTNAG 3 cut(s) 294, 383, 896
BstDSI CCRYGG 3 cut(s) 123, 132, 573
BstF5I GGATG 2 cut(s) 189, 403
BstFNI CGCG 2 cut(s) 260, 602
BstH2I RGCGCY 1 cut(s) 806
BstHHI GCGC 1 cut(s) 805
BstKTI GATC 4 cut(s) 238, 472, 985, 1001
BstMAI GTCTC 2 cut(s) 473, 822
BstMBI GATC 4 cut(s) 235, 469, 982, 998
BstMWI GCNNNNNNNGC 6 cut(s) 134, 266, 599, 853, 888, 897
BstNI CCWGG 1 cut(s) 148
BstNSI RCATGY 1 cut(s) 895
BstSCI CCNGG 1 cut(s) 146
BstUI CGCG 2 cut(s) 260, 602
BstV1I GCAGC 1 cut(s) 285
BstV2I GAAGAC 1 cut(s) 1046
BsuRI GGCC 3 cut(s) 128, 137, 839
BtgI CCRYGG 3 cut(s) 123, 132, 573
BtsCI GGATG 2 cut(s) 189, 403
BtsIMutI CAGTG 2 cut(s) 243, 1149
Cac8I GCNNGC 6 cut(s) 195, 267, 710, 807, 849, 893
CciI TCATGA 2 cut(s) 643, 825
CfoI GCGC 1 cut(s) 805
Cfr10I RCCGGY 1 cut(s) 839
Cfr13I GGNCC 2 cut(s) 877, 913
CseI GACGC 1 cut(s) 599
Csp6I GTAC 6 cut(s) 219, 322, 958, 1116, 1134, 1143
CviAII CATG 4 cut(s) 574, 644, 826, 892
CviQI GTAC 6 cut(s) 219, 322, 958, 1116, 1134, 1143
DdeI CTNAG 3 cut(s) 294, 383, 896
DpnI GATC 4 cut(s) 237, 471, 984, 1000
DpnII GATC 4 cut(s) 235, 469, 982, 998
DrdI GACNNNNNNGTC 2 cut(s) 596, 884
DseDI GACNNNNNNGTC 2 cut(s) 596, 884
EaeI YGGCCR 2 cut(s) 126, 135
Eam1104I CTCTTC 5 cut(s) 171, 698, 786, 1005, 1097
EarI CTCTTC 5 cut(s) 171, 698, 786, 1005, 1097
Ecl136II GAGCTC 1 cut(s) 510
Eco130I CCWWGG 1 cut(s) 573
Eco24I GRGCYC 1 cut(s) 512
Eco32I GATATC 1 cut(s) 634
Eco47I GGWCC 2 cut(s) 877, 913
Eco47III AGCGCT 1 cut(s) 804
Eco53kI GAGCTC 1 cut(s) 510
Eco57I CTGAAG 2 cut(s) 291, 902
EcoICRI GAGCTC 1 cut(s) 510
EcoO109I RGGNCCY 1 cut(s) 913
EcoRII CCWGG 1 cut(s) 146
EcoRV GATATC 1 cut(s) 634
EcoT14I CCWWGG 1 cut(s) 573
EcoT22I ATGCAT 1 cut(s) 658
EcoT38I GRGCYC 1 cut(s) 512
ErhI CCWWGG 1 cut(s) 573
FaeI CATG 4 cut(s) 577, 647, 829, 895
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FaqI GGGAC 3 cut(s) 263, 936, 1135
FatI CATG 4 cut(s) 573, 643, 825, 891
FbaI TGATCA 1 cut(s) 982
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 1 cut(s) 299
FokI GGATG 2 cut(s) 196, 390
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 1 cut(s) 299
FspBI CTAG 8 cut(s) 69, 194, 378, 483, 848, 852, 995, 1167
GlaI GCGC 1 cut(s) 804
GluI GCNGC 1 cut(s) 299
HaeII RGCGCY 1 cut(s) 806
HaeIII GGCC 3 cut(s) 128, 137, 839
HapII CCGG 1 cut(s) 840
HgaI GACGC 1 cut(s) 599
HhaI GCGC 1 cut(s) 805
Hin1II CATG 4 cut(s) 577, 647, 829, 895
Hin6I GCGC 1 cut(s) 803
HinP1I GCGC 1 cut(s) 803
HincII GTYRAC 2 cut(s) 416, 976
HindII GTYRAC 2 cut(s) 416, 976
HindIII AAGCTT 1 cut(s) 273
HinfI GANTC 8 cut(s) 56, 385, 391, 494, 677, 725, 815, 1042
HpaII CCGG 1 cut(s) 840
HphI GGTGA 1 cut(s) 854
Hpy166II GTNNAC 3 cut(s) 416, 976, 1211
Hpy188I TCNGA 9 cut(s) 66, 346, 384, 390, 396, 499, 661, 730, 814
Hpy188III TCNNGA 8 cut(s) 53, 233, 239, 314, 551, 644, 826, 1186
Hpy8I GTNNAC 3 cut(s) 416, 976, 1211
Hpy99I CGWCG 2 cut(s) 16, 417
HpyAV CCTTC 4 cut(s) 265, 829, 926, 1132
HpyCH4III ACNGT 3 cut(s) 206, 212, 350
HpyCH4IV ACGT 2 cut(s) 77, 1077
HpyCH4V TGCA 4 cut(s) 656, 700, 782, 1075
HpyF10VI GCNNNNNNNGC 6 cut(s) 134, 266, 599, 853, 888, 897
HpyF3I CTNAG 3 cut(s) 294, 383, 896
HpySE526I ACGT 2 cut(s) 77, 1077
Hsp92II CATG 4 cut(s) 577, 647, 829, 895
HspAI GCGC 1 cut(s) 803
Ksp22I TGATCA 1 cut(s) 982
Kzo9I GATC 4 cut(s) 235, 469, 982, 998
LguI GCTCTTC 1 cut(s) 698
LmnI GCTCC 4 cut(s) 156, 262, 515, 867
Lsp1109I GCAGC 1 cut(s) 285
LweI GCATC 2 cut(s) 180, 665
MaeI CTAG 8 cut(s) 69, 194, 378, 483, 848, 852, 995, 1167
MaeII ACGT 2 cut(s) 77, 1077
MaeIII GTNAC 3 cut(s) 206, 350, 767
MalI GATC 4 cut(s) 237, 471, 984, 1000
MboI GATC 4 cut(s) 235, 469, 982, 998
MfeI CAATTG 1 cut(s) 594
MhlI GDGCHC 1 cut(s) 512
MluCI AATT 5 cut(s) 45, 325, 527, 594, 761
MlyI GAGTC 6 cut(s) 65, 394, 400, 734, 824, 1036
MmeI TCCRAC 4 cut(s) 89, 98, 183, 918
Mph1103I ATGCAT 1 cut(s) 658
MseI TTAA 3 cut(s) 104, 201, 1215
MslI CAYNNNNRTG 1 cut(s) 575
MspA1I CMGCKG 1 cut(s) 298
MspCI CTTAAG 1 cut(s) 103
MspI CCGG 1 cut(s) 840
MspR9I CCNGG 1 cut(s) 148
MunI CAATTG 1 cut(s) 594
Mva1269I GAATGC 2 cut(s) 632, 760
MvaI CCWGG 1 cut(s) 148
MvnI CGCG 2 cut(s) 260, 602
MwoI GCNNNNNNNGC 6 cut(s) 134, 266, 599, 853, 888, 897
NcoI CCATGG 1 cut(s) 573
NdeII GATC 4 cut(s) 235, 469, 982, 998
NheI GCTAGC 2 cut(s) 193, 847
NlaIII CATG 4 cut(s) 577, 647, 829, 895
NlaIV GGNNCC 1 cut(s) 152
NsiI ATGCAT 1 cut(s) 658
NspI RCATGY 1 cut(s) 895
OliI CACNNNNGTG 1 cut(s) 575
PaeI GCATGC 1 cut(s) 895
PagI TCATGA 2 cut(s) 643, 825
PciSI GCTCTTC 1 cut(s) 698
PcsI WCGNNNNNNNCGW 1 cut(s) 140
PctI GAATGC 2 cut(s) 632, 760
PfeI GAWTC 2 cut(s) 494, 677
PkrI GCNGC 1 cut(s) 300
PleI GAGTC 6 cut(s) 64, 393, 399, 733, 823, 1036
PpsI GAGTC 6 cut(s) 64, 393, 399, 733, 823, 1036
PpuMI RGGWCCY 1 cut(s) 913
Psp124BI GAGCTC 1 cut(s) 512
Psp1406I AACGTT 1 cut(s) 77
Psp5II RGGWCCY 1 cut(s) 913
Psp6I CCWGG 1 cut(s) 146
PspGI CCWGG 1 cut(s) 146
PspN4I GGNNCC 1 cut(s) 152
PspPI GGNCC 2 cut(s) 877, 913
PspPPI RGGWCCY 1 cut(s) 913
PsrI GAACNNNNNNTAC 2 cut(s) 941, 973
PvuII CAGCTG 1 cut(s) 298
RsaI GTAC 6 cut(s) 220, 323, 959, 1117, 1135, 1144
RsaNI GTAC 6 cut(s) 219, 322, 958, 1116, 1134, 1143
RseI CAYNNNNRTG 1 cut(s) 575
SacI GAGCTC 1 cut(s) 512
SalI GTCGAC 1 cut(s) 414
SapI GCTCTTC 1 cut(s) 698
SaqAI TTAA 3 cut(s) 104, 201, 1215
SatI GCNGC 1 cut(s) 299
Sau3AI GATC 4 cut(s) 235, 469, 982, 998
Sau96I GGNCC 2 cut(s) 877, 913
ScaI AGTACT 2 cut(s) 220, 959
SchI GAGTC 6 cut(s) 65, 394, 400, 734, 824, 1036
ScrFI CCNGG 1 cut(s) 148
SduI GDGCHC 1 cut(s) 512
SfaNI GCATC 2 cut(s) 180, 665
SfiI GGCCNNNNNGGCC 1 cut(s) 134
SinI GGWCC 2 cut(s) 877, 913
SmiMI CAYNNNNRTG 1 cut(s) 575
SmlI CTYRAG 4 cut(s) 103, 231, 549, 713
SmoI CTYRAG 4 cut(s) 103, 231, 549, 713
SpeI ACTAGT 2 cut(s) 68, 377
SphI GCATGC 1 cut(s) 895
Sse9I AATT 5 cut(s) 45, 325, 527, 594, 761
SsiI CCGC 5 cut(s) 111, 260, 602, 880, 946
SspMI CTAG 8 cut(s) 69, 194, 378, 483, 848, 852, 995, 1167
SstI GAGCTC 1 cut(s) 512
StyD4I CCNGG 1 cut(s) 146
StyI CCWWGG 1 cut(s) 573
TaaI ACNGT 3 cut(s) 206, 212, 350
TaiI ACGT 2 cut(s) 80, 1080
TaqI TCGA 2 cut(s) 415, 683
TasI AATT 5 cut(s) 45, 325, 527, 594, 761
TatI WGTACW 3 cut(s) 218, 321, 957
TfiI GAWTC 2 cut(s) 494, 677
Tru1I TTAA 3 cut(s) 104, 201, 1215
Tru9I TTAA 3 cut(s) 104, 201, 1215
TscAI CASTG 2 cut(s) 250, 1156
TseI GCWGC 1 cut(s) 298
TspDTI ATGAA 7 cut(s) 38, 200, 392, 632, 690, 814, 1115
TspRI CASTG 2 cut(s) 250, 1156
Vha464I CTTAAG 1 cut(s) 103
VpaK11BI GGWCC 2 cut(s) 877, 913
XapI RAATTY 1 cut(s) 45
XceI RCATGY 1 cut(s) 895
XmiI GTMKAC 1 cut(s) 415
XspI CTAG 8 cut(s) 69, 194, 378, 483, 848, 852, 995, 1167
ZrmI AGTACT 2 cut(s) 220, 959
Zsp2I ATGCAT 1 cut(s) 658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.