ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 752 |
| AciI | CCGC | 1 cut(s) | 250 |
| AcsI | RAATTY | 2 cut(s) | 413, 444 |
| AcyI | GRCGYC | 1 cut(s) | 749 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 460 |
| AgsI | TTSAA | 4 cut(s) | 162, 272, 548, 604 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 399, 431 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 267, 299 |
| AluBI | AGCT | 2 cut(s) | 503, 544 |
| AluI | AGCT | 2 cut(s) | 503, 544 |
| Alw21I | GWGCWC | 1 cut(s) | 692 |
| Alw26I | GTCTC | 2 cut(s) | 591, 756 |
| Alw44I | GTGCAC | 1 cut(s) | 688 |
| ApaLI | GTGCAC | 1 cut(s) | 688 |
| ApoI | RAATTY | 2 cut(s) | 413, 444 |
| AspS9I | GGNCC | 3 cut(s) | 59, 106, 420 |
| AsuHPI | GGTGA | 4 cut(s) | 188, 229, 480, 713 |
| AvaII | GGWCC | 3 cut(s) | 59, 106, 420 |
| BaeGI | GKGCMC | 1 cut(s) | 692 |
| Bbv12I | GWGCWC | 1 cut(s) | 692 |
| BccI | CCATC | 3 cut(s) | 180, 627, 692 |
| BclI | TGATCA | 1 cut(s) | 193 |
| BcoDI | GTCTC | 2 cut(s) | 591, 756 |
| BfaI | CTAG | 3 cut(s) | 354, 504, 793 |
| Bme18I | GGWCC | 3 cut(s) | 59, 106, 420 |
| BmgT120I | GGNCC | 3 cut(s) | 59, 106, 420 |
| BmiI | GGNNCC | 4 cut(s) | 61, 284, 421, 422 |
| BmrI | ACTGGG | 1 cut(s) | 149 |
| BmuI | ACTGGG | 1 cut(s) | 149 |
| BpmI | CTGGAG | 2 cut(s) | 477, 536 |
| BpuEI | CTTGAG | 1 cut(s) | 744 |
| BsaBI | GATNNNNATC | 1 cut(s) | 120 |
| BsaHI | GRCGYC | 1 cut(s) | 749 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 267, 297, 461, 491 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 460 |
| Bse1I | ACTGG | 3 cut(s) | 155, 454, 519 |
| Bse8I | GATNNNNATC | 1 cut(s) | 120 |
| BseJI | GATNNNNATC | 1 cut(s) | 120 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 460 |
| BseMII | CTCAG | 1 cut(s) | 767 |
| BseNI | ACTGG | 3 cut(s) | 155, 454, 519 |
| BseRI | GAGGAG | 3 cut(s) | 466, 475, 725 |
| BseSI | GKGCMC | 1 cut(s) | 692 |
| BsgI | GTGCAG | 1 cut(s) | 319 |
| BsiHKAI | GWGCWC | 1 cut(s) | 692 |
| BslFI | GGGAC | 2 cut(s) | 165, 406 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 460 |
| BsmAI | GTCTC | 2 cut(s) | 591, 756 |
| BsmBI | CGTCTC | 1 cut(s) | 756 |
| BsmFI | GGGAC | 2 cut(s) | 165, 406 |
| BsmI | GAATGC | 1 cut(s) | 464 |
| Bsp1286I | GDGCHC | 1 cut(s) | 692 |
| Bsp143I | GATC | 3 cut(s) | 115, 193, 763 |
| BspACI | CCGC | 1 cut(s) | 250 |
| BspCNI | CTCAG | 1 cut(s) | 766 |
| BspLI | GGNNCC | 4 cut(s) | 61, 284, 421, 422 |
| BsrI | ACTGG | 3 cut(s) | 155, 454, 519 |
| BssMI | GATC | 3 cut(s) | 115, 193, 763 |
| BssNI | GRCGYC | 1 cut(s) | 749 |
| Bst4CI | ACNGT | 1 cut(s) | 741 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 288 |
| BstACI | GRCGYC | 1 cut(s) | 749 |
| BstDEI | CTNAG | 1 cut(s) | 753 |
| BstKTI | GATC | 3 cut(s) | 118, 196, 766 |
| BstMAI | GTCTC | 2 cut(s) | 591, 756 |
| BstMBI | GATC | 3 cut(s) | 115, 193, 763 |
| BstSLI | GKGCMC | 1 cut(s) | 692 |
| BtsIMutI | CAGTG | 2 cut(s) | 690, 737 |
| Cfr13I | GGNCC | 3 cut(s) | 59, 106, 420 |
| CviJI | RGCY | 7 cut(s) | 283, 503, 544, 572, 586, 664, 757 |
| CviKI_1 | RGCY | 7 cut(s) | 283, 503, 544, 572, 586, 664, 757 |
| DdeI | CTNAG | 1 cut(s) | 753 |
| DpnI | GATC | 3 cut(s) | 117, 195, 765 |
| DpnII | GATC | 3 cut(s) | 115, 193, 763 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 288 |
| EarI | CTCTTC | 2 cut(s) | 35, 288 |
| Eco47I | GGWCC | 3 cut(s) | 59, 106, 420 |
| EcoO109I | RGGNCCY | 2 cut(s) | 59, 420 |
| Esp3I | CGTCTC | 1 cut(s) | 756 |
| FaiI | YATR | 5 cut(s) | 54, 212, 373, 768, 770 |
| FaqI | GGGAC | 2 cut(s) | 165, 406 |
| FbaI | TGATCA | 1 cut(s) | 193 |
| FspBI | CTAG | 3 cut(s) | 354, 504, 793 |
| GsuI | CTGGAG | 2 cut(s) | 477, 536 |
| Hin1I | GRCGYC | 1 cut(s) | 749 |
| HindIII | AAGCTT | 1 cut(s) | 542 |
| HinfI | GANTC | 6 cut(s) | 188, 387, 473, 507, 562, 789 |
| HphI | GGTGA | 4 cut(s) | 188, 229, 480, 713 |
| Hpy166II | GTNNAC | 2 cut(s) | 690, 744 |
| Hpy188I | TCNGA | 6 cut(s) | 110, 145, 193, 266, 287, 343 |
| Hpy188III | TCNNGA | 4 cut(s) | 14, 162, 494, 761 |
| Hpy8I | GTNNAC | 2 cut(s) | 690, 744 |
| Hpy99I | CGWCG | 1 cut(s) | 751 |
| HpyAV | CCTTC | 1 cut(s) | 490 |
| HpyCH4III | ACNGT | 1 cut(s) | 741 |
| HpyCH4IV | ACGT | 3 cut(s) | 85, 625, 749 |
| HpyCH4V | TGCA | 3 cut(s) | 300, 629, 690 |
| HpyF3I | CTNAG | 1 cut(s) | 753 |
| HpySE526I | ACGT | 3 cut(s) | 85, 625, 749 |
| Hsp92I | GRCGYC | 1 cut(s) | 749 |
| KflI | GGGWCCC | 1 cut(s) | 420 |
| Ksp22I | TGATCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 3 cut(s) | 115, 193, 763 |
| LmnI | GCTCC | 1 cut(s) | 288 |
| MaeI | CTAG | 3 cut(s) | 354, 504, 793 |
| MaeII | ACGT | 3 cut(s) | 85, 625, 749 |
| MaeIII | GTNAC | 2 cut(s) | 127, 632 |
| MalI | GATC | 3 cut(s) | 117, 195, 765 |
| MboI | GATC | 3 cut(s) | 115, 193, 763 |
| MboII | GAAGA | 6 cut(s) | 22, 284, 305, 379, 532, 658 |
| MhlI | GDGCHC | 1 cut(s) | 692 |
| MluCI | AATT | 5 cut(s) | 44, 413, 444, 654, 705 |
| MlyI | GAGTC | 3 cut(s) | 396, 467, 571 |
| MmeI | TCCRAC | 2 cut(s) | 133, 302 |
| MseI | TTAA | 3 cut(s) | 657, 669, 785 |
| MslI | CAYNNNNRTG | 1 cut(s) | 624 |
| Mva1269I | GAATGC | 1 cut(s) | 464 |
| NdeII | GATC | 3 cut(s) | 115, 193, 763 |
| NlaIV | GGNNCC | 4 cut(s) | 61, 284, 421, 422 |
| NmeAIII | GCCGAG | 1 cut(s) | 410 |
| PctI | GAATGC | 1 cut(s) | 464 |
| PfeI | GAWTC | 3 cut(s) | 188, 507, 789 |
| PleI | GAGTC | 3 cut(s) | 395, 467, 570 |
| PpsI | GAGTC | 3 cut(s) | 395, 467, 570 |
| PpuMI | RGGWCCY | 2 cut(s) | 59, 420 |
| Psp5II | RGGWCCY | 2 cut(s) | 59, 420 |
| PspN4I | GGNNCC | 4 cut(s) | 61, 284, 421, 422 |
| PspPI | GGNCC | 3 cut(s) | 59, 106, 420 |
| PspPPI | RGGWCCY | 2 cut(s) | 59, 420 |
| RseI | CAYNNNNRTG | 1 cut(s) | 624 |
| SaqAI | TTAA | 3 cut(s) | 657, 669, 785 |
| Sau3AI | GATC | 3 cut(s) | 115, 193, 763 |
| Sau96I | GGNCC | 3 cut(s) | 59, 106, 420 |
| SchI | GAGTC | 3 cut(s) | 396, 467, 571 |
| SduI | GDGCHC | 1 cut(s) | 692 |
| SinI | GGWCC | 3 cut(s) | 59, 106, 420 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 624 |
| SmlI | CTYRAG | 1 cut(s) | 759 |
| SmoI | CTYRAG | 1 cut(s) | 759 |
| Sse9I | AATT | 5 cut(s) | 44, 413, 444, 654, 705 |
| SsiI | CCGC | 1 cut(s) | 250 |
| SspMI | CTAG | 3 cut(s) | 354, 504, 793 |
| TaaI | ACNGT | 1 cut(s) | 741 |
| TaiI | ACGT | 3 cut(s) | 88, 628, 752 |
| TaqI | TCGA | 3 cut(s) | 13, 312, 448 |
| TasI | AATT | 5 cut(s) | 44, 413, 444, 654, 705 |
| TfiI | GAWTC | 3 cut(s) | 188, 507, 789 |
| Tru1I | TTAA | 3 cut(s) | 657, 669, 785 |
| Tru9I | TTAA | 3 cut(s) | 657, 669, 785 |
| TscAI | CASTG | 2 cut(s) | 697, 744 |
| TspDTI | ATGAA | 3 cut(s) | 201, 306, 546 |
| TspGWI | ACGGA | 1 cut(s) | 253 |
| TspRI | CASTG | 2 cut(s) | 697, 744 |
| VneI | GTGCAC | 1 cut(s) | 688 |
| VpaK11BI | GGWCC | 3 cut(s) | 59, 106, 420 |
| XapI | RAATTY | 2 cut(s) | 413, 444 |
| XspI | CTAG | 3 cut(s) | 354, 504, 793 |
| ZraI | GACGTC | 1 cut(s) | 750 |