LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA_int_end_N2 | PF12928 | 57 - 114 | 1.6e-12 | tRNA-splicing endonuclease subunit sen54 N-term |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 249, 425 |
| AcuI | CTGAAG | 2 cut(s) | 564, 570 |
| AfaI | GTAC | 1 cut(s) | 461 |
| AgsI | TTSAA | 4 cut(s) | 7, 28, 323, 580 |
| AhlI | ACTAGT | 1 cut(s) | 359 |
| AjnI | CCWGG | 2 cut(s) | 179, 485 |
| AluBI | AGCT | 5 cut(s) | 19, 65, 286, 434, 548 |
| AluI | AGCT | 5 cut(s) | 19, 65, 286, 434, 548 |
| Alw26I | GTCTC | 1 cut(s) | 466 |
| ApoI | RAATTY | 2 cut(s) | 249, 425 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 410 |
| BauI | CACGAG | 1 cut(s) | 156 |
| BccI | CCATC | 4 cut(s) | 38, 211, 341, 392 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 211, 245 |
| BciT130I | CCWGG | 2 cut(s) | 181, 487 |
| BciVI | GTATCC | 1 cut(s) | 202 |
| BcoDI | GTCTC | 1 cut(s) | 466 |
| BcuI | ACTAGT | 1 cut(s) | 359 |
| BfaI | CTAG | 3 cut(s) | 186, 360, 492 |
| BfuI | GTATCC | 1 cut(s) | 202 |
| Bme1390I | CCNGG | 2 cut(s) | 181, 487 |
| BmrFI | CCNGG | 2 cut(s) | 181, 487 |
| BmrI | ACTGGG | 1 cut(s) | 214 |
| BmsI | GCATC | 1 cut(s) | 162 |
| BmuI | ACTGGG | 1 cut(s) | 214 |
| BpuEI | CTTGAG | 1 cut(s) | 516 |
| BsaJI | CCNNGG | 6 cut(s) | 179, 195, 261, 369, 454, 485 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 2 cut(s) | 181, 487 |
| BseDI | CCNNGG | 6 cut(s) | 179, 195, 261, 369, 454, 485 |
| BseGI | GGATG | 3 cut(s) | 49, 214, 352 |
| BseMII | CTCAG | 1 cut(s) | 460 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BsmAI | GTCTC | 1 cut(s) | 466 |
| BspCNI | CTCAG | 1 cut(s) | 459 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssECI | CCNNGG | 6 cut(s) | 179, 195, 261, 369, 454, 485 |
| BssSI | CACGAG | 1 cut(s) | 156 |
| BssT1I | CCWWGG | 3 cut(s) | 195, 369, 454 |
| Bst2BI | CACGAG | 1 cut(s) | 156 |
| Bst2UI | CCWGG | 2 cut(s) | 181, 487 |
| Bst4CI | ACNGT | 1 cut(s) | 515 |
| Bst6I | CTCTTC | 2 cut(s) | 129, 546 |
| BstC8I | GCNNGC | 1 cut(s) | 284 |
| BstDEI | CTNAG | 1 cut(s) | 446 |
| BstDSI | CCRYGG | 1 cut(s) | 261 |
| BstF5I | GGATG | 3 cut(s) | 49, 214, 352 |
| BstMAI | GTCTC | 1 cut(s) | 466 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 158 |
| BstNI | CCWGG | 2 cut(s) | 181, 487 |
| BstSCI | CCNGG | 2 cut(s) | 179, 485 |
| BsuI | GTATCC | 1 cut(s) | 202 |
| BtgI | CCRYGG | 1 cut(s) | 261 |
| BtgZI | GCGATG | 1 cut(s) | 66 |
| BtsCI | GGATG | 3 cut(s) | 49, 214, 352 |
| Cac8I | GCNNGC | 1 cut(s) | 284 |
| Csp6I | GTAC | 1 cut(s) | 460 |
| CviAII | CATG | 2 cut(s) | 223, 476 |
| CviJI | RGCY | 8 cut(s) | 19, 65, 200, 227, 286, 332, 434, 548 |
| CviKI_1 | RGCY | 8 cut(s) | 19, 65, 200, 227, 286, 332, 434, 548 |
| CviQI | GTAC | 1 cut(s) | 460 |
| DdeI | CTNAG | 1 cut(s) | 446 |
| Eam1104I | CTCTTC | 2 cut(s) | 129, 546 |
| EarI | CTCTTC | 2 cut(s) | 129, 546 |
| Eco130I | CCWWGG | 3 cut(s) | 195, 369, 454 |
| Eco57I | CTGAAG | 2 cut(s) | 564, 570 |
| EcoRII | CCWGG | 2 cut(s) | 179, 485 |
| EcoT14I | CCWWGG | 3 cut(s) | 195, 369, 454 |
| ErhI | CCWWGG | 3 cut(s) | 195, 369, 454 |
| FaeI | CATG | 2 cut(s) | 226, 479 |
| FatI | CATG | 2 cut(s) | 222, 475 |
| FokI | GGATG | 3 cut(s) | 56, 221, 359 |
| FspBI | CTAG | 3 cut(s) | 186, 360, 492 |
| Hin1II | CATG | 2 cut(s) | 226, 479 |
| HinfI | GANTC | 2 cut(s) | 267, 518 |
| Hpy188I | TCNGA | 2 cut(s) | 397, 449 |
| Hpy188III | TCNNGA | 2 cut(s) | 505, 542 |
| HpyCH4III | ACNGT | 1 cut(s) | 515 |
| HpyCH4V | TGCA | 1 cut(s) | 175 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 158 |
| HpyF3I | CTNAG | 1 cut(s) | 446 |
| Hsp92II | CATG | 2 cut(s) | 226, 479 |
| LpnPI | CCDG | 6 cut(s) | 166, 190, 193, 472, 499, 555 |
| LweI | GCATC | 1 cut(s) | 162 |
| MaeI | CTAG | 3 cut(s) | 186, 360, 492 |
| MboII | GAAGA | 8 cut(s) | 101, 116, 140, 143, 146, 386, 519, 563 |
| MluCI | AATT | 3 cut(s) | 71, 249, 425 |
| MmeI | TCCRAC | 1 cut(s) | 399 |
| MnlI | CCTC | 6 cut(s) | 34, 49, 52, 130, 295, 415 |
| MroXI | GAANNNNTTC | 1 cut(s) | 410 |
| MseI | TTAA | 1 cut(s) | 74 |
| MspR9I | CCNGG | 2 cut(s) | 181, 487 |
| MvaI | CCWGG | 2 cut(s) | 181, 487 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 158 |
| NlaIII | CATG | 2 cut(s) | 226, 479 |
| PdmI | GAANNNNTTC | 1 cut(s) | 410 |
| PfeI | GAWTC | 2 cut(s) | 267, 518 |
| Psp6I | CCWGG | 2 cut(s) | 179, 485 |
| PspGI | CCWGG | 2 cut(s) | 179, 485 |
| RsaI | GTAC | 1 cut(s) | 461 |
| RsaNI | GTAC | 1 cut(s) | 460 |
| SaqAI | TTAA | 1 cut(s) | 74 |
| ScrFI | CCNGG | 2 cut(s) | 181, 487 |
| SfaNI | GCATC | 1 cut(s) | 162 |
| SmlI | CTYRAG | 1 cut(s) | 531 |
| SmoI | CTYRAG | 1 cut(s) | 531 |
| SpeI | ACTAGT | 1 cut(s) | 359 |
| Sse9I | AATT | 3 cut(s) | 71, 249, 425 |
| SspMI | CTAG | 3 cut(s) | 186, 360, 492 |
| StyD4I | CCNGG | 2 cut(s) | 179, 485 |
| StyI | CCWWGG | 3 cut(s) | 195, 369, 454 |
| TaaI | ACNGT | 1 cut(s) | 515 |
| TasI | AATT | 3 cut(s) | 71, 249, 425 |
| TfiI | GAWTC | 2 cut(s) | 267, 518 |
| Tru1I | TTAA | 1 cut(s) | 74 |
| Tru9I | TTAA | 1 cut(s) | 74 |
| TspDTI | ATGAA | 4 cut(s) | 98, 102, 117, 141 |
| XapI | RAATTY | 2 cut(s) | 249, 425 |
| XmnI | GAANNNNTTC | 1 cut(s) | 410 |
| XspI | CTAG | 3 cut(s) | 186, 360, 492 |