Rh2BG599700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
82067385 .. 82068194
810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG599700.1

Sequence Viewer

Length: 309 bp
ATGAAGCATAACATTTTTGTGGAAACTCTGAACCTAAGGGAGGGTATAATCGCAGTTCGGGACAGGAAACCCACCTTTGTAGATGAGTCATGGAAACACTTTTCTTCTCTCGGAGATTTTCTTAGTAAAGGCTATGCTTCTTTCTCCACATCAATACGCCTATTAGTTTTTGATCCCGAGGCTTTCATGTTTCCAAAAGATTTCACGAAGACCTGCTCTGAACCACTGCCTCGTCTTCAAAAACTTTATGTCCACAGATTTGACCATCCATTTGAGGAAATAGGAGACCAAAATTGTGGGAGTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

11.92

Weight (kDa)

6.9

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 221
AclWI GGATC 1 cut(s) 167
AfiI CCNNNNNNNGG 1 cut(s) 40
AgsI TTSAA 1 cut(s) 239
Alw26I GTCTC 1 cut(s) 279
AlwI GGATC 1 cut(s) 167
Ama87I CYCGRG 1 cut(s) 176
ArsI GACNNNNNNTTYG 2 cut(s) 254, 286
AvaI CYCGRG 1 cut(s) 176
AxyI CCTNAGG 1 cut(s) 35
BbsI GAAGAC 2 cut(s) 215, 227
BccI CCATC 1 cut(s) 273
BcoDI GTCTC 1 cut(s) 279
BfuAI ACCTGC 1 cut(s) 221
BmeT110I CYCGRG 1 cut(s) 176
BpiI GAAGAC 2 cut(s) 215, 227
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 1 cut(s) 177
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse21I CCTNAGG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 1 cut(s) 265
BseLI CCNNNNNNNGG 1 cut(s) 40
BsiHKCI CYCGRG 1 cut(s) 176
BslFI GGGAC 1 cut(s) 74
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 279
BsmFI GGGAC 1 cut(s) 74
Bso31I GGTCTC 1 cut(s) 279
BsoBI CYCGRG 1 cut(s) 176
Bsp143I GATC 1 cut(s) 172
BspMI ACCTGC 1 cut(s) 221
BspPI GGATC 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 279
BssECI CCNNGG 1 cut(s) 177
BssMI GATC 1 cut(s) 172
BstDEI CTNAG 2 cut(s) 35, 122
BstENI CCTNNNNNAGG 1 cut(s) 38
BstF5I GGATG 1 cut(s) 265
BstKTI GATC 1 cut(s) 175
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 1 cut(s) 172
BstV2I GAAGAC 2 cut(s) 215, 227
BstXI CCANNNNNNTGG 1 cut(s) 296
Bsu36I CCTNAGG 1 cut(s) 35
BtsCI GGATG 1 cut(s) 265
BtsI GCAGTG 1 cut(s) 224
BtsIMutI CAGTG 1 cut(s) 224
BveI ACCTGC 1 cut(s) 221
CviAII CATG 2 cut(s) 90, 187
CviJI RGCY 2 cut(s) 132, 182
CviKI_1 RGCY 2 cut(s) 132, 182
DdeI CTNAG 2 cut(s) 35, 122
DpnI GATC 1 cut(s) 174
DpnII GATC 1 cut(s) 172
Eco31I GGTCTC 1 cut(s) 279
Eco81I CCTNAGG 1 cut(s) 35
Eco88I CYCGRG 1 cut(s) 176
EcoNI CCTNNNNNAGG 1 cut(s) 38
FaeI CATG 2 cut(s) 93, 190
FaiI YATR 6 cut(s) 9, 47, 91, 135, 188, 249
FaqI GGGAC 1 cut(s) 74
FatI CATG 2 cut(s) 89, 186
FokI GGATG 1 cut(s) 252
Hin1II CATG 2 cut(s) 93, 190
HinfI GANTC 2 cut(s) 86, 301
Hpy166II GTNNAC 1 cut(s) 253
Hpy188I TCNGA 3 cut(s) 30, 113, 220
Hpy188III TCNNGA 3 cut(s) 59, 176, 205
Hpy8I GTNNAC 1 cut(s) 253
HpyF3I CTNAG 2 cut(s) 35, 122
Hsp92II CATG 2 cut(s) 93, 190
Kzo9I GATC 1 cut(s) 172
LpnPI CCDG 2 cut(s) 49, 226
MalI GATC 1 cut(s) 174
MboI GATC 1 cut(s) 172
MboII GAAGA 3 cut(s) 96, 220, 227
MluCI AATT 1 cut(s) 292
MlyI GAGTC 1 cut(s) 95
MnlI CCTC 4 cut(s) 34, 172, 240, 268
MslI CAYNNNNRTG 1 cut(s) 17
NdeII GATC 1 cut(s) 172
NlaIII CATG 2 cut(s) 93, 190
PleI GAGTC 1 cut(s) 94
PpsI GAGTC 1 cut(s) 94
RseI CAYNNNNRTG 1 cut(s) 17
Sau3AI GATC 1 cut(s) 172
SchI GAGTC 1 cut(s) 95
SetI ASST 3 cut(s) 36, 77, 215
SmiMI CAYNNNNRTG 1 cut(s) 17
Sse9I AATT 1 cut(s) 292
TasI AATT 1 cut(s) 292
TscAI CASTG 1 cut(s) 231
TspDTI ATGAA 2 cut(s) 17, 175
TspRI CASTG 1 cut(s) 231
XagI CCTNNNNNAGG 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.