FvH4_2g04502

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000480
Physical Location & Seq
Reverse (-)
3465444 .. 3468098
2655 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04502.t1

Sequence Viewer

Length: 1779 bp
ATGGCAAGAGAAACTAGGTCTTCGAAGAGATTAGGACAGCCGAGTAGTAGTGAACATGATAAAGCTGAAACTATTGTGTTCTGGAAACCAAGAGAATTCCAAATACAAAGGGTGAGGGATAATTATGTGACTTCGAACCGAGTTTCAGTGCATGCAATTCCTGAAGGGGCTAATGTTTTCACCGGAGAAAACATTCCGGAAAATGCCCTTGTGGTCTCTTCTCACCACCTTAGGTTCTTGAGGTTTCCTCTTCATCCTGTATTCCAAATCTTGTGGCGTGTTACTGGCTTGCACCCCATGCAATTCAATCCCAACTCATACATGCTTCTCACTGGGTTTTTAGTTATGGGCATGAAGTGGGATGTGTCATTAGGTCTAGGGGATTTCTTTTATTTTCATAGACTCTCCCGGATCGTGGATACGGATATGTTTTTCAACTTTTGTCCTCGCCCACAAAGGAAAATCTTTGAAGAAAAAATGGGTAATAACTTTGGGTGGAAAAATGAGCCGCTAATGGTTCTTGGTGAGTGGGCAGCACCAGAGCTCAACAAGATGGACATTCCTAGAGTCTTCTCTAAGCAGATCGATTATAAGCTTTGTTCTACGGATTCCGTTTTGGATGAGTCTCGTGTCAAGTGGTTTAAAGAACACATATTGCGTCGGGGATGGAATGCAGCTCAGTTTGCATGCAGTACTGACCTACAGGAAATTTCTAGTTGTCGATCAGGATCAATCTATCGTTCATGTCTGCAATTGTTGGGGCCTAATCTCCGCGGAGAAAGGCTGTTCAATAGTGTCGTCGAGTTAGAAAGCAATTTTCTGACTTCTGAACGCACTCCCACTTTATTTGCAGAGAGTCTCAAGGTTGGGGATTCCTTTGAAGAGTTGGAAAATCTTCAAGAGGACGACATGGACATCAAGCGCATTAGAGTTCCAAATCCACAAGGTAAAAAGTCCAAGAAACAGAGGTTGTCTCATGCCGAAAGCAGCGAGGTTACCACCCATGGAAGCCAAGGAGGACCAGAGCTGCCTCATACTCCTCAAAGGCTTCAGACTGAGCCGTCGCCGTGCAAATCCCCTCATGGTTCCCTGGTGGCCGCTTCTTCTAACACTACTATTCAAGGCTCTGCGAACATGCCACTACCACCTCTGAAGACTCCTGTGCAGCTAACATTTAGAAAAGAGGATGACTCGTATGTGTTGGAGGGAGATCCCATTGCTTTTGATAAAGAAGCATGCTTGGCAGTGGCACAGGCCTTGGCTTTGAACCCCGTTGATCACGAAAGGCTTATGGGACTGAGCCAGCGAGATCTTGCAGCGCAGGTGGCCCTTAGCCTGCAGTCGGCCTCATCGATGACTCAACATCTCTTAATGCGGACAGAAGCCGCTGAGGATAGGTTGTGGAGTCTCATACATAAGGCTAAGCAAGAGACACAGAAGACTGTGGATGAGCTGAAGGCAATGCGTGAGGCTTTTGCAAAGAAATCCAAAGAAGTTGAGGACAAGAACAAGAAGATTGACGAGTTAAATGCTAAACTGTCAAAGGAGATTGCAATCAGGGCAAAAGAGTTTGAGTTGAACCAGAGCCAAGTTACTAAATGTTCTTGCAAAAGCTTCCGACTAGGATGGGTGCAAGGTCAGCAAAAAGAGGAAGACAGGATTTTCGAAGGGCCTGAGGCATTCGATGAGGAAATGGGGTTGAAATCTACTGACTATGAGTGGATCCATGGGATGAGACCTGAGGACAAACCTTCTTCCGATGATGCTCGTGAAGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

593

Amino Acids

67.46

Weight (kDa)

6.39

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
AarI CACCTGC 1 cut(s) 1312
AasI GACNNNNNNGTC 1 cut(s) 1060
Acc36I ACCTGC 1 cut(s) 1312
AccII CGCG 1 cut(s) 774
AccIII TCCGGA 1 cut(s) 196
AciI CCGC 6 cut(s) 509, 772, 774, 1098, 1375, 1386
AclWI GGATC 5 cut(s) 419, 736, 1205, 1717, 1730
AcoI YGGCCR 1 cut(s) 1095
AcsI RAATTY 2 cut(s) 95, 708
AcuI CTGAAG 4 cut(s) 183, 1034, 1172, 1475
AfaI GTAC 1 cut(s) 694
AfiI CCNNNNNNNGG 2 cut(s) 415, 1342
AjnI CCWGG 1 cut(s) 1089
AluBI AGCT 8 cut(s) 65, 544, 595, 677, 1027, 1168, 1453, 1614
AluI AGCT 8 cut(s) 65, 544, 595, 677, 1027, 1168, 1453, 1614
Alw21I GWGCWC 1 cut(s) 546
Alw26I GTCTC 7 cut(s) 220, 630, 863, 978, 1412, 1424, 1729
AlwI GGATC 5 cut(s) 419, 736, 1205, 1717, 1730
Aor13HI TCCGGA 1 cut(s) 196
AoxI GGCC 6 cut(s) 761, 1095, 1254, 1326, 1344, 1670
ApeKI GCWGC 6 cut(s) 533, 674, 987, 1027, 1165, 1316
ApoI RAATTY 2 cut(s) 95, 708
ArsI GACNNNNNNTTYG 2 cut(s) 1646, 1678
Asp700I GAANNNNTTC 2 cut(s) 192, 894
AspLEI GCGC 2 cut(s) 924, 1321
AspS9I GGNCC 4 cut(s) 761, 1019, 1327, 1670
AsuC2I CCSGG 1 cut(s) 409
AsuHPI GGTGA 4 cut(s) 124, 172, 215, 536
AsuII TTCGAA 3 cut(s) 23, 134, 1665
AvaII GGWCC 1 cut(s) 1019
AxyI CCTNAGG 3 cut(s) 230, 1674, 1740
BamHI GGATCC 1 cut(s) 1722
BanII GRGCYC 1 cut(s) 546
BauI CACGAG 2 cut(s) 627, 1767
BbsI GAAGAC 5 cut(s) 12, 562, 1160, 1445, 1659
Bbv12I GWGCWC 1 cut(s) 546
BbvCI CCTCAGC 1 cut(s) 1389
BbvI GCAGC 6 cut(s) 545, 686, 999, 1014, 1177, 1328
BccI CCATC 3 cut(s) 547, 660, 1620
BceAI ACGGC 2 cut(s) 1045, 1051
BcgI CGANNNNNNTGC 2 cut(s) 1511, 1545
BciT130I CCWGG 1 cut(s) 1091
BciVI GTATCC 1 cut(s) 412
BclI TGATCA 1 cut(s) 1276
BcnI CCSGG 1 cut(s) 409
BcoDI GTCTC 7 cut(s) 220, 630, 863, 978, 1412, 1424, 1729
BfaI CTAG 5 cut(s) 15, 377, 564, 714, 1622
BfmI CTRYAG 2 cut(s) 701, 1337
BfuAI ACCTGC 1 cut(s) 1312
BfuI GTATCC 1 cut(s) 412
BglII AGATCT 1 cut(s) 1309
BisI GCNGC 9 cut(s) 509, 534, 675, 988, 1028, 1098, 1166, 1317, 1386
BlpI GCTNAGC 1 cut(s) 1422
BlsI GCNGC 9 cut(s) 510, 535, 676, 989, 1029, 1099, 1167, 1318, 1387
BmcAI AGTACT 1 cut(s) 694
Bme1390I CCNGG 2 cut(s) 409, 1091
Bme18I GGWCC 1 cut(s) 1019
BmgT120I GGNCC 4 cut(s) 761, 1019, 1327, 1670
BmiI GGNNCC 3 cut(s) 762, 1087, 1724
BmrFI CCNGG 2 cut(s) 409, 1091
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 1 cut(s) 1753
BmuI ACTGGG 1 cut(s) 342
BpiI GAAGAC 5 cut(s) 12, 562, 1160, 1445, 1659
BplI GAGNNNNNCTC 6 cut(s) 232, 264, 958, 990, 1175, 1207
Bpu10I CCTNAGC 2 cut(s) 1331, 1389
Bpu1102I GCTNAGC 1 cut(s) 1422
Bpu14I TTCGAA 3 cut(s) 23, 134, 1665
BpuEI CTTGAG 2 cut(s) 259, 845
BpuMI CCSGG 1 cut(s) 409
Bsa29I ATCGAT 2 cut(s) 585, 1352
BsaBI GATNNNNATC 2 cut(s) 727, 1553
BsaI GGTCTC 2 cut(s) 220, 1729
BsaJI CCNNGG 6 cut(s) 772, 1003, 1012, 1089, 1257, 1726
BsaWI WCCGGW 2 cut(s) 182, 196
Bsc4I CCNNNNNNNGG 2 cut(s) 415, 1342
Bse1I ACTGG 2 cut(s) 289, 337
Bse21I CCTNAGG 3 cut(s) 230, 1674, 1740
Bse3DI GCAATG 2 cut(s) 1215, 1467
Bse8I GATNNNNATC 2 cut(s) 727, 1553
BseAI TCCGGA 1 cut(s) 196
BseBI CCWGG 1 cut(s) 1091
BseCI ATCGAT 2 cut(s) 585, 1352
BseDI CCNNGG 6 cut(s) 772, 1003, 1012, 1089, 1257, 1726
BseGI GGATG 8 cut(s) 253, 367, 625, 671, 1192, 1453, 1631, 1737
BseJI GATNNNNATC 2 cut(s) 727, 1553
BseLI CCNNNNNNNGG 2 cut(s) 415, 1342
BseMI GCAATG 2 cut(s) 1215, 1467
BseMII CTCAG 6 cut(s) 692, 1047, 1289, 1380, 1665, 1731
BseNI ACTGG 2 cut(s) 289, 337
BseRI GAGGAG 1 cut(s) 1029
BseXI GCAGC 6 cut(s) 545, 686, 999, 1014, 1177, 1328
BsgI GTGCAG 1 cut(s) 1184
Bsh1236I CGCG 1 cut(s) 774
BshFI GGCC 6 cut(s) 763, 1097, 1256, 1328, 1346, 1672
BshVI ATCGAT 2 cut(s) 585, 1352
BsiHKAI GWGCWC 1 cut(s) 546
BsiSI CCGG 3 cut(s) 183, 197, 409
BslFI GGGAC 1 cut(s) 1308
BslI CCNNNNNNNGG 2 cut(s) 415, 1342
BsmAI GTCTC 7 cut(s) 220, 630, 863, 978, 1412, 1424, 1729
BsmFI GGGAC 1 cut(s) 1308
BsmI GAATGC 2 cut(s) 676, 1679
BsnI GGCC 6 cut(s) 763, 1097, 1256, 1328, 1346, 1672
Bso31I GGTCTC 2 cut(s) 220, 1729
Bsp119I TTCGAA 3 cut(s) 23, 134, 1665
Bsp1286I GDGCHC 1 cut(s) 546
Bsp13I TCCGGA 1 cut(s) 196
Bsp143I GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
Bsp1720I GCTNAGC 1 cut(s) 1422
Bsp19I CCATGG 2 cut(s) 1003, 1726
BspACI CCGC 6 cut(s) 509, 772, 774, 1098, 1375, 1386
BspANI GGCC 6 cut(s) 763, 1097, 1256, 1328, 1346, 1672
BspCNI CTCAG 6 cut(s) 691, 1048, 1290, 1381, 1666, 1732
BspDI ATCGAT 2 cut(s) 585, 1352
BspEI TCCGGA 1 cut(s) 196
BspFNI CGCG 1 cut(s) 774
BspLI GGNNCC 3 cut(s) 762, 1087, 1724
BspMAI CTGCAG 1 cut(s) 1341
BspMI ACCTGC 1 cut(s) 1312
BspPI GGATC 5 cut(s) 419, 736, 1205, 1717, 1730
BspT104I TTCGAA 3 cut(s) 23, 134, 1665
BspTNI GGTCTC 2 cut(s) 220, 1729
BsrDI GCAATG 2 cut(s) 1215, 1467
BsrI ACTGG 2 cut(s) 289, 337
BssECI CCNNGG 6 cut(s) 772, 1003, 1012, 1089, 1257, 1726
BssMI GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
BssSI CACGAG 2 cut(s) 627, 1767
BssT1I CCWWGG 4 cut(s) 1003, 1012, 1257, 1726
Bst2BI CACGAG 2 cut(s) 627, 1767
Bst2UI CCWGG 1 cut(s) 1091
Bst4CI ACNGT 2 cut(s) 1444, 1539
Bst6I CTCTTC 4 cut(s) 20, 223, 255, 876
BstAPI GCANNNNNTGC 1 cut(s) 298
BstBI TTCGAA 3 cut(s) 23, 134, 1665
BstC8I GCNNGC 6 cut(s) 153, 290, 688, 1237, 1304, 1337
BstDSI CCRYGG 3 cut(s) 772, 1003, 1726
BstEII GGTNACC 1 cut(s) 994
BstF5I GGATG 8 cut(s) 253, 367, 625, 671, 1192, 1453, 1631, 1737
BstFNI CGCG 1 cut(s) 774
BstHHI GCGC 2 cut(s) 924, 1321
BstKTI GATC 8 cut(s) 414, 585, 725, 731, 1213, 1279, 1312, 1725
BstMAI GTCTC 7 cut(s) 220, 630, 863, 978, 1412, 1424, 1729
BstMBI GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
BstMWI GCNNNNNNNGC 7 cut(s) 298, 683, 1241, 1325, 1559, 1639, 1772
BstNI CCWGG 1 cut(s) 1091
BstNSI RCATGY 5 cut(s) 155, 325, 690, 1138, 1239
BstPI GGTNACC 1 cut(s) 994
BstSCI CCNGG 2 cut(s) 407, 1089
BstSFI CTRYAG 2 cut(s) 701, 1337
BstUI CGCG 1 cut(s) 774
BstV1I GCAGC 6 cut(s) 545, 686, 999, 1014, 1177, 1328
BstV2I GAAGAC 5 cut(s) 12, 562, 1160, 1445, 1659
BstX2I RGATCY 3 cut(s) 1210, 1309, 1722
BstYI RGATCY 3 cut(s) 1210, 1309, 1722
Bsu15I ATCGAT 2 cut(s) 585, 1352
Bsu36I CCTNAGG 3 cut(s) 230, 1674, 1740
BsuI GTATCC 1 cut(s) 412
BsuRI GGCC 6 cut(s) 763, 1097, 1256, 1328, 1346, 1672
BsuTUI ATCGAT 2 cut(s) 585, 1352
BtgI CCRYGG 3 cut(s) 772, 1003, 1726
BtsCI GGATG 8 cut(s) 253, 367, 625, 671, 1192, 1453, 1631, 1737
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 3 cut(s) 153, 330, 1251
BveI ACCTGC 1 cut(s) 1312
Cac8I GCNNGC 6 cut(s) 153, 290, 688, 1237, 1304, 1337
CfoI GCGC 2 cut(s) 924, 1321
Cfr13I GGNCC 4 cut(s) 761, 1019, 1327, 1670
Cfr42I CCGCGG 1 cut(s) 775
ClaI ATCGAT 2 cut(s) 585, 1352
CseI GACGC 1 cut(s) 647
Csp6I GTAC 1 cut(s) 693
CspCI CAANNNNNGTGG 4 cut(s) 254, 289, 829, 864
CviQI GTAC 1 cut(s) 693
DpnI GATC 8 cut(s) 413, 584, 724, 730, 1212, 1278, 1311, 1724
DpnII GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
DraI TTTAAA 1 cut(s) 643
DrdI GACNNNNNNGTC 1 cut(s) 1060
DseDI GACNNNNNNGTC 1 cut(s) 1060
EaeI YGGCCR 1 cut(s) 1095
Eam1104I CTCTTC 4 cut(s) 20, 223, 255, 876
EarI CTCTTC 4 cut(s) 20, 223, 255, 876
Ecl136II GAGCTC 1 cut(s) 544
Eco130I CCWWGG 4 cut(s) 1003, 1012, 1257, 1726
Eco147I AGGCCT 1 cut(s) 1256
Eco24I GRGCYC 1 cut(s) 546
Eco31I GGTCTC 2 cut(s) 220, 1729
Eco47I GGWCC 1 cut(s) 1019
Eco53kI GAGCTC 1 cut(s) 544
Eco57I CTGAAG 4 cut(s) 183, 1034, 1172, 1475
Eco81I CCTNAGG 3 cut(s) 230, 1674, 1740
Eco91I GGTNACC 1 cut(s) 994
EcoICRI GAGCTC 1 cut(s) 544
EcoO109I RGGNCCY 2 cut(s) 761, 1670
EcoO65I GGTNACC 1 cut(s) 994
EcoRI GAATTC 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 1089
EcoT14I CCWWGG 4 cut(s) 1003, 1012, 1257, 1726
EcoT38I GRGCYC 1 cut(s) 546
ErhI CCWWGG 4 cut(s) 1003, 1012, 1257, 1726
FaqI GGGAC 1 cut(s) 1308
FbaI TGATCA 1 cut(s) 1276
Fnu4HI GCNGC 9 cut(s) 509, 534, 675, 988, 1028, 1098, 1166, 1317, 1386
FokI GGATG 8 cut(s) 240, 374, 632, 678, 1199, 1460, 1638, 1744
FriOI GRGCYC 1 cut(s) 546
Fsp4HI GCNGC 9 cut(s) 509, 534, 675, 988, 1028, 1098, 1166, 1317, 1386
FspBI CTAG 5 cut(s) 15, 377, 564, 714, 1622
GlaI GCGC 2 cut(s) 923, 1320
GluI GCNGC 9 cut(s) 509, 534, 675, 988, 1028, 1098, 1166, 1317, 1386
HaeIII GGCC 6 cut(s) 763, 1097, 1256, 1328, 1346, 1672
HapII CCGG 3 cut(s) 183, 197, 409
HgaI GACGC 1 cut(s) 647
HhaI GCGC 2 cut(s) 924, 1321
Hin6I GCGC 2 cut(s) 922, 1319
HinP1I GCGC 2 cut(s) 922, 1319
HindIII AAGCTT 2 cut(s) 593, 1612
HpaII CCGG 3 cut(s) 183, 197, 409
HphI GGTGA 4 cut(s) 124, 172, 215, 536
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 6 cut(s) 822, 829, 1053, 1152, 1619, 1759
Hpy188III TCNNGA 8 cut(s) 82, 161, 197, 238, 726, 899, 1280, 1769
Hpy8I GTNNAC 1 cut(s) 53
Hpy99I CGWCG 3 cut(s) 663, 803, 1066
HpyAV CCTTC 4 cut(s) 158, 1450, 1661, 1761
HpyCH4III ACNGT 2 cut(s) 1444, 1539
HpyF10VI GCNNNNNNNGC 7 cut(s) 298, 683, 1241, 1325, 1559, 1639, 1772
HspAI GCGC 2 cut(s) 922, 1319
Kpn2I TCCGGA 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 1276
KspI CCGCGG 1 cut(s) 775
Kzo9I GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
Lsp1109I GCAGC 6 cut(s) 545, 686, 999, 1014, 1177, 1328
LweI GCATC 1 cut(s) 1753
MaeI CTAG 5 cut(s) 15, 377, 564, 714, 1622
MaeIII GTNAC 4 cut(s) 127, 280, 994, 1591
MalI GATC 8 cut(s) 413, 584, 724, 730, 1212, 1278, 1311, 1724
MboI GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
MfeI CAATTG 1 cut(s) 752
MflI RGATCY 3 cut(s) 1210, 1309, 1722
MhlI GDGCHC 1 cut(s) 546
MluCI AATT 7 cut(s) 95, 121, 156, 302, 708, 752, 814
MlyI GAGTC 8 cut(s) 396, 576, 632, 865, 1150, 1184, 1351, 1414
MmeI TCCRAC 3 cut(s) 867, 1182, 1642
MroI TCCGGA 1 cut(s) 196
MroXI GAANNNNTTC 2 cut(s) 192, 894
MseI TTAA 3 cut(s) 642, 1370, 1526
MspA1I CMGCKG 2 cut(s) 774, 1388
MspI CCGG 3 cut(s) 183, 197, 409
MspR9I CCNGG 2 cut(s) 409, 1091
MunI CAATTG 1 cut(s) 752
Mva1269I GAATGC 2 cut(s) 676, 1679
MvaI CCWGG 1 cut(s) 1091
MvnI CGCG 1 cut(s) 774
MwoI GCNNNNNNNGC 7 cut(s) 298, 683, 1241, 1325, 1559, 1639, 1772
NciI CCSGG 1 cut(s) 409
NcoI CCATGG 2 cut(s) 1003, 1726
NdeII GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
NlaIV GGNNCC 3 cut(s) 762, 1087, 1724
NmeAIII GCCGAG 1 cut(s) 66
NmuCI GTSAC 1 cut(s) 127
NspI RCATGY 5 cut(s) 155, 325, 690, 1138, 1239
NspV TTCGAA 3 cut(s) 23, 134, 1665
PaeI GCATGC 3 cut(s) 155, 690, 1239
PaqCI CACCTGC 1 cut(s) 1312
PceI AGGCCT 1 cut(s) 1256
PcsI WCGNNNNNNNCGW 1 cut(s) 1349
PctI GAATGC 2 cut(s) 676, 1679
PdmI GAANNNNTTC 2 cut(s) 192, 894
PfeI GAWTC 2 cut(s) 608, 872
PfoI TCCNGGA 1 cut(s) 407
PkrI GCNGC 9 cut(s) 510, 535, 676, 989, 1029, 1099, 1167, 1318, 1387
PleI GAGTC 8 cut(s) 396, 575, 631, 864, 1150, 1184, 1351, 1413
PpsI GAGTC 8 cut(s) 396, 575, 631, 864, 1150, 1184, 1351, 1413
PsiI TTATAA 1 cut(s) 591
Psp124BI GAGCTC 1 cut(s) 546
Psp6I CCWGG 1 cut(s) 1089
PspEI GGTNACC 1 cut(s) 994
PspGI CCWGG 1 cut(s) 1089
PspN4I GGNNCC 3 cut(s) 762, 1087, 1724
PspPI GGNCC 4 cut(s) 761, 1019, 1327, 1670
PstI CTGCAG 1 cut(s) 1341
PsuI RGATCY 3 cut(s) 1210, 1309, 1722
RsaI GTAC 1 cut(s) 694
RsaNI GTAC 1 cut(s) 693
SacI GAGCTC 1 cut(s) 546
SacII CCGCGG 1 cut(s) 775
SaqAI TTAA 3 cut(s) 642, 1370, 1526
SatI GCNGC 9 cut(s) 509, 534, 675, 988, 1028, 1098, 1166, 1317, 1386
Sau3AI GATC 8 cut(s) 411, 582, 722, 728, 1210, 1276, 1309, 1722
Sau96I GGNCC 4 cut(s) 761, 1019, 1327, 1670
ScaI AGTACT 1 cut(s) 694
SchI GAGTC 8 cut(s) 396, 576, 632, 865, 1150, 1184, 1351, 1414
ScrFI CCNGG 2 cut(s) 409, 1091
SduI GDGCHC 1 cut(s) 546
SfaNI GCATC 1 cut(s) 1753
SfcI CTRYAG 2 cut(s) 701, 1337
Sfr303I CCGCGG 1 cut(s) 775
SfuI TTCGAA 3 cut(s) 23, 134, 1665
SgrBI CCGCGG 1 cut(s) 775
SinI GGWCC 1 cut(s) 1019
SmlI CTYRAG 2 cut(s) 238, 860
SmoI CTYRAG 2 cut(s) 238, 860
SphI GCATGC 3 cut(s) 155, 690, 1239
Sse9I AATT 7 cut(s) 95, 121, 156, 302, 708, 752, 814
SseBI AGGCCT 1 cut(s) 1256
SsiI CCGC 6 cut(s) 509, 772, 774, 1098, 1375, 1386
SspMI CTAG 5 cut(s) 15, 377, 564, 714, 1622
SstI GAGCTC 1 cut(s) 546
StuI AGGCCT 1 cut(s) 1256
StyD4I CCNGG 2 cut(s) 407, 1089
StyI CCWWGG 4 cut(s) 1003, 1012, 1257, 1726
TaaI ACNGT 2 cut(s) 1444, 1539
TaqI TCGA 8 cut(s) 23, 134, 585, 721, 801, 1352, 1665, 1683
TasI AATT 7 cut(s) 95, 121, 156, 302, 708, 752, 814
TatI WGTACW 1 cut(s) 692
TauI GCSGC 3 cut(s) 511, 1100, 1388
TfiI GAWTC 2 cut(s) 608, 872
Tru1I TTAA 3 cut(s) 642, 1370, 1526
Tru9I TTAA 3 cut(s) 642, 1370, 1526
TscAI CASTG 3 cut(s) 153, 337, 1251
TseFI GTSAC 1 cut(s) 127
TseI GCWGC 6 cut(s) 533, 674, 987, 1027, 1165, 1316
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 4 cut(s) 242, 368, 386, 732
TspGWI ACGGA 3 cut(s) 437, 601, 620
TspRI CASTG 3 cut(s) 153, 337, 1251
VpaK11BI GGWCC 1 cut(s) 1019
XapI RAATTY 2 cut(s) 95, 708
XceI RCATGY 5 cut(s) 155, 325, 690, 1138, 1239
XmnI GAANNNNTTC 2 cut(s) 192, 894
XspI CTAG 5 cut(s) 15, 377, 564, 714, 1622
ZrmI AGTACT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.