Rmu_sc0002986.1_g000030

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002986.1
OG0000480
Physical Location & Seq
Forward (+)
137028 .. 140111
3084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002986.1_g000030.1.cds

Sequence Viewer

Length: 2172 bp
atggcacgcatcaaattttctgatttatctgtatctcagaacgggaacctggagacccatggagaacccacgccttggcaaccgacgcgttcgactctagagaagtgtgttgaggagtattctatcccatcatcggttaaactttcagttgttcccgccgatgcagatatctacacgggtaggaatattcccgacgatgccttgatactgtctcctgagcatttacgttatgtcaggttccccatacatcctgtatttcaacttatgtgggctgtgctcggtctgcatcctcttcaactcaaccagaattcctccctcgttttatctgcttttttgattatgggtttgaaatgggaagtatccctagggctgtctgattttctttacctttacaactgcgccaagctgaacaaacattttcggtatttcaatttcacacccttcccaaaaatgaaggtgtttacagggatttccgctcgcgacaacgattggaaatctagggcgctgatgattttgggtgattggcggtctcccgaactggatttgcttcccccgaaagccttcgcctacgacctcgcctacaaaatttctcaggctaagttcaacctcccccttaaccgggtagaatggcttgagacacacttggttgggcgaggatggtatccctctcaatttgcgacccttgggaaccttcttaatgtggcgtccattcgtccctccgctctgtttggccgctacagaacgcgcgtggatcaatctctttcgggaaagtcattggccctcttggttacaagcatggagggccacttctatgtgtcagagcgttgcgaacccgcattcatcgagtacctcgcagctaaggaaacgtttaggaatgtcatccctggctcgggttttttggtggctgaggaggatggtgtgcatgaggattccgaggaaagggaagaggaacctaatggcgatggcgccgacgagggggtgcctttcctcatggtgagggagctacctcagatgattccccctcctcggaaattgaaaaagcggagggtcgagagccctcctcgttgtattggggtcgttgatgttccatctgccagctcgtctcgaagccctttgccactttctccttcgcacggagagaacttcttcattgcaagaggacccgaccgctcttgtgcccccctgccaccgaaagctttggagctcaagttcaagaaaagggattgttcctatattttagcaggggaatctcttgcttccaatggcttggcagcatcggcggttgctggtgccttcgtagcatcgcaccctaaactgggaggtccctccaagagtcctatggcgttgtacgatgacgtttgtgcttctcaactcgatgctcttctggcatcccatcgcctcctacgcggcattgacgctctccattccaaacaacaacagaaaatcgacgaagcgaatcgtaaactcgagttcaaggagaaagagcttgacgatcagatgaggacgatggttgaattagcctccgtccttgaggacaaaaaccaagagataacgaagctgaagaatgatctggccttggtaactcgaagcaaagacgaggagttccagaaagggggtgctcagatcaagcgcgtgtctgccaaatacttccgacttgggtggaatcaggctctaactgatgaagagaagaggtgctacataggtcctgatgagtttgaccgctttttcggttttgaacctatggcttattctcccatccgcggcatgatttcaggagatgttccttcgtcggcctctagcgcatccggggatgaagatgaggatgtgtcatctgatgcagtcatcctcagctttcgtgcccgattacccgaacttccctctacgggtcgtggaaaacaaatttctgccgtcgacgaacacactcctgaccgtcatgcttcttccccgatcatgatcatgtctgatagctcatcgaatagatcgcgcggatgcgcaaaagagggtcactccgacgacgacttttgtcgttaccttgaggacatgctggattctcctgatgccgtggagatgaacactcgccgtacctcccggggagatgctggctccagcaggcctcgacgtcgaagcatgagcattgaccgggctcagagtccagaatcgcaccgcctctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

723

Amino Acids

80.7

Weight (kDa)

6.21

Isoelectric Point (pI)

49.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2122
Acc16I TGCGCA 1 cut(s) 1993
AccB1I GGYRCC 3 cut(s) 965, 979, 1289
AccB7I CCANNNNNTGG 1 cut(s) 75
AccBSI CCGCTC 3 cut(s) 476, 722, 1170
AccI GTMKAC 1 cut(s) 1911
AccII CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
AclI AACGTT 1 cut(s) 866
AclWI GGATC 1 cut(s) 759
AcoI YGGCCR 1 cut(s) 730
AcsI RAATTY 4 cut(s) 14, 307, 585, 1899
AcuI CTGAAG 1 cut(s) 1580
AcyI GRCGYC 3 cut(s) 704, 966, 2119
AfaI GTAC 3 cut(s) 848, 1349, 2083
AflIII ACRYGT 1 cut(s) 86
AjnI CCWGG 2 cut(s) 48, 883
AloI GAACNNNNNNTCC 2 cut(s) 1193, 1225
Alw21I GWGCWC 3 cut(s) 279, 1206, 1621
Alw26I GTCTC 5 cut(s) 47, 216, 534, 629, 1107
AlwI GGATC 1 cut(s) 759
Ama87I CYCGRG 3 cut(s) 889, 1466, 2088
AoxI GGCC 6 cut(s) 730, 777, 802, 1572, 1791, 2111
ApeKI GCWGC 2 cut(s) 854, 1271
ApoI RAATTY 4 cut(s) 14, 307, 585, 1899
ArsI GACNNNNNNTTYG 2 cut(s) 1709, 1741
Asp700I GAANNNNTTC 2 cut(s) 560, 1145
AspA2I CCTAGG 1 cut(s) 364
AspLEI GCGC 8 cut(s) 401, 505, 747, 968, 1632, 1802, 1986, 1994
AspS9I GGNCC 5 cut(s) 778, 802, 1160, 1322, 1703
AsuC2I CCSGG 5 cut(s) 620, 1807, 2089, 2090, 2141
AsuHPI GGTGA 2 cut(s) 530, 1006
AvaI CYCGRG 3 cut(s) 889, 1466, 2088
AvaII GGWCC 3 cut(s) 1160, 1322, 1703
AvrII CCTAGG 1 cut(s) 364
BaeGI GKGCMC 2 cut(s) 1180, 1861
BanI GGYRCC 3 cut(s) 965, 979, 1289
BanII GRGCYC 3 cut(s) 1058, 1206, 2146
BarI GAAGNNNNNNTAC 2 cut(s) 1679, 1711
Bbv12I GWGCWC 3 cut(s) 279, 1206, 1621
BbvCI CCTCAGC 2 cut(s) 906, 1847
BbvI GCAGC 2 cut(s) 866, 1283
BccI CCATC 8 cut(s) 136, 651, 908, 956, 1096, 1401, 1501, 1763
BceAI ACGGC 3 cut(s) 1892, 2045, 2064
BciT130I CCWGG 2 cut(s) 50, 885
BciVI GTATCC 2 cut(s) 370, 672
BclI TGATCA 1 cut(s) 1953
BcnI CCSGG 5 cut(s) 620, 1807, 2089, 2090, 2141
BcoDI GTCTC 5 cut(s) 47, 216, 534, 629, 1107
BfaI CTAG 4 cut(s) 98, 365, 498, 1797
BfmI CTRYAG 1 cut(s) 736
BfoI RGCGCY 2 cut(s) 506, 969
BfuI GTATCC 2 cut(s) 370, 672
BisI GCNGC 5 cut(s) 733, 855, 1272, 1408, 1762
BlnI CCTAGG 1 cut(s) 364
BlsI GCNGC 5 cut(s) 734, 856, 1273, 1409, 1763
Bme1390I CCNGG 7 cut(s) 50, 620, 885, 1807, 2089, 2090, 2141
Bme18I GGWCC 3 cut(s) 1160, 1322, 1703
BmeT110I CYCGRG 3 cut(s) 889, 1466, 2088
BmgT120I GGNCC 5 cut(s) 778, 802, 1160, 1322, 1703
BmrFI CCNGG 7 cut(s) 50, 620, 885, 1807, 2089, 2090, 2141
BmrI ACTGGG 1 cut(s) 1325
BmuI ACTGGG 1 cut(s) 1325
BoxI GACNNNNGTC 1 cut(s) 2022
BplI GAGNNNNNCTC 4 cut(s) 1045, 1077, 1991, 2023
BpmI CTGGAG 2 cut(s) 71, 2089
Bpu10I CCTNAGC 4 cut(s) 216, 858, 906, 1847
BpuEI CTTGAG 4 cut(s) 653, 1190, 1550, 2054
BpuMI CCSGG 5 cut(s) 620, 1807, 2089, 2090, 2141
BsaBI GATNNNNATC 1 cut(s) 1952
BsaHI GRCGYC 3 cut(s) 704, 966, 2119
BsaI GGTCTC 2 cut(s) 47, 534
BsaXI ACNNNNNCTCC 2 cut(s) 1193, 1223
Bse1I ACTGG 2 cut(s) 543, 1320
Bse3DI GCAATG 1 cut(s) 1149
Bse8I GATNNNNATC 1 cut(s) 1952
BseBI CCWGG 2 cut(s) 50, 885
BseJI GATNNNNATC 1 cut(s) 1952
BseMI GCAATG 1 cut(s) 1149
BseMII CTCAG 8 cut(s) 50, 207, 605, 897, 1022, 1634, 1861, 2159
BseNI ACTGG 2 cut(s) 543, 1320
BseRI GAGGAG 5 cut(s) 128, 923, 1014, 1050, 1613
BseSI GKGCMC 2 cut(s) 1180, 1861
BseXI GCAGC 2 cut(s) 866, 1283
Bsh1236I CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
Bsh1285I CGRYCG 1 cut(s) 1168
BshFI GGCC 6 cut(s) 732, 779, 804, 1574, 1793, 2113
BshNI GGYRCC 3 cut(s) 965, 979, 1289
BsiEI CGRYCG 1 cut(s) 1168
BsiHKAI GWGCWC 3 cut(s) 279, 1206, 1621
BsiHKCI CYCGRG 3 cut(s) 889, 1466, 2088
BsiSI CCGG 4 cut(s) 619, 1806, 2089, 2140
BslFI GGGAC 2 cut(s) 699, 1308
BsmAI GTCTC 5 cut(s) 47, 216, 534, 629, 1107
BsmBI CGTCTC 1 cut(s) 1107
BsmFI GGGAC 2 cut(s) 699, 1308
BsmI GAATGC 1 cut(s) 836
BsnI GGCC 6 cut(s) 732, 779, 804, 1574, 1793, 2113
Bso31I GGTCTC 2 cut(s) 47, 534
BsoBI CYCGRG 3 cut(s) 889, 1466, 2088
Bsp1286I GDGCHC 7 cut(s) 279, 1058, 1180, 1206, 1621, 1861, 2146
Bsp143I GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
Bsp19I CCATGG 1 cut(s) 58
Bsp68I TCGCGA 1 cut(s) 480
BspANI GGCC 6 cut(s) 732, 779, 804, 1574, 1793, 2113
BspCNI CTCAG 8 cut(s) 49, 208, 604, 898, 1021, 1633, 1860, 2158
BspFNI CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
BspHI TCATGA 1 cut(s) 1950
BspPI GGATC 1 cut(s) 759
BspQI GCTCTTC 1 cut(s) 1386
BspT107I GGYRCC 3 cut(s) 965, 979, 1289
BspTNI GGTCTC 2 cut(s) 47, 534
BsrBI CCGCTC 3 cut(s) 476, 722, 1170
BsrDI GCAATG 1 cut(s) 1149
BsrI ACTGG 2 cut(s) 543, 1320
BssMI GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
BssNI GRCGYC 3 cut(s) 704, 966, 2119
BssT1I CCWWGG 5 cut(s) 58, 74, 364, 682, 1575
Bst2UI CCWGG 2 cut(s) 50, 885
Bst4CI ACNGT 2 cut(s) 210, 1931
Bst6I CTCTTC 5 cut(s) 297, 939, 1386, 1677, 1682
BstACI GRCGYC 3 cut(s) 704, 966, 2119
BstC8I GCNNGC 5 cut(s) 7, 478, 1096, 2101, 2111
BstDSI CCRYGG 3 cut(s) 58, 1759, 2061
BstFNI CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
BstH2I RGCGCY 2 cut(s) 506, 969
BstHHI GCGC 8 cut(s) 401, 505, 747, 968, 1632, 1802, 1986, 1994
BstKTI GATC 7 cut(s) 754, 1495, 1570, 1626, 1950, 1956, 1982
BstMAI GTCTC 5 cut(s) 47, 216, 534, 629, 1107
BstMBI GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
BstMCI CGRYCG 1 cut(s) 1168
BstMWI GCNNNNNNNGC 8 cut(s) 85, 283, 801, 1277, 1298, 1385, 1404, 1799
BstNI CCWGG 2 cut(s) 50, 885
BstNSI RCATGY 1 cut(s) 2044
BstPAI GACNNNNGTC 1 cut(s) 2022
BstSCI CCNGG 7 cut(s) 48, 618, 883, 1805, 2087, 2088, 2139
BstSFI CTRYAG 1 cut(s) 736
BstSLI GKGCMC 2 cut(s) 1180, 1861
BstUI CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
BstV1I GCAGC 2 cut(s) 866, 1283
BstXI CCANNNNNNTGG 1 cut(s) 1267
BsuI GTATCC 2 cut(s) 370, 672
BsuRI GGCC 6 cut(s) 732, 779, 804, 1574, 1793, 2113
BtgI CCRYGG 3 cut(s) 58, 1759, 2061
BtgZI GCGATG 3 cut(s) 975, 1287, 1379
BtuMI TCGCGA 1 cut(s) 480
Cac8I GCNNGC 5 cut(s) 7, 478, 1096, 2101, 2111
CciI TCATGA 1 cut(s) 1950
CfoI GCGC 8 cut(s) 401, 505, 747, 968, 1632, 1802, 1986, 1994
Cfr13I GGNCC 5 cut(s) 778, 802, 1160, 1322, 1703
Cfr42I CCGCGG 1 cut(s) 1762
Cfr9I CCCGGG 1 cut(s) 2088
CseI GACGC 3 cut(s) 94, 693, 1424
Csp6I GTAC 3 cut(s) 847, 1348, 2082
CspCI CAANNNNNGTGG 2 cut(s) 248, 283
CviQI GTAC 3 cut(s) 847, 1348, 2082
DinI GGCGCC 1 cut(s) 967
DpnI GATC 7 cut(s) 753, 1494, 1569, 1625, 1949, 1955, 1981
DpnII GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
EaeI YGGCCR 1 cut(s) 730
Eam1104I CTCTTC 5 cut(s) 297, 939, 1386, 1677, 1682
EarI CTCTTC 5 cut(s) 297, 939, 1386, 1677, 1682
Ecl136II GAGCTC 1 cut(s) 1204
Eco130I CCWWGG 5 cut(s) 58, 74, 364, 682, 1575
Eco147I AGGCCT 1 cut(s) 2113
Eco24I GRGCYC 3 cut(s) 1058, 1206, 2146
Eco31I GGTCTC 2 cut(s) 47, 534
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 3 cut(s) 1160, 1322, 1703
Eco53kI GAGCTC 1 cut(s) 1204
Eco57I CTGAAG 1 cut(s) 1580
Eco88I CYCGRG 3 cut(s) 889, 1466, 2088
EcoICRI GAGCTC 1 cut(s) 1204
EcoO109I RGGNCCY 3 cut(s) 1160, 1322, 1703
EcoRI GAATTC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 48, 883
EcoRV GATATC 1 cut(s) 169
EcoT14I CCWWGG 5 cut(s) 58, 74, 364, 682, 1575
EcoT38I GRGCYC 3 cut(s) 1058, 1206, 2146
EgeI GGCGCC 1 cut(s) 967
EheI GGCGCC 1 cut(s) 967
ErhI CCWWGG 5 cut(s) 58, 74, 364, 682, 1575
Esp3I CGTCTC 1 cut(s) 1107
FaqI GGGAC 2 cut(s) 699, 1308
FauI CCCGC 2 cut(s) 163, 841
FbaI TGATCA 1 cut(s) 1953
FblI GTMKAC 1 cut(s) 1911
Fnu4HI GCNGC 5 cut(s) 733, 855, 1272, 1408, 1762
FriOI GRGCYC 3 cut(s) 1058, 1206, 2146
Fsp4HI GCNGC 5 cut(s) 733, 855, 1272, 1408, 1762
FspBI CTAG 4 cut(s) 98, 365, 498, 1797
FspI TGCGCA 1 cut(s) 1993
GlaI GCGC 8 cut(s) 400, 504, 746, 967, 1631, 1801, 1985, 1993
GluI GCNGC 5 cut(s) 733, 855, 1272, 1408, 1762
GsuI CTGGAG 2 cut(s) 71, 2089
HaeII RGCGCY 2 cut(s) 506, 969
HaeIII GGCC 6 cut(s) 732, 779, 804, 1574, 1793, 2113
HapII CCGG 4 cut(s) 619, 1806, 2089, 2140
HgaI GACGC 3 cut(s) 94, 693, 1424
HhaI GCGC 8 cut(s) 401, 505, 747, 968, 1632, 1802, 1986, 1994
Hin1I GRCGYC 3 cut(s) 704, 966, 2119
Hin6I GCGC 8 cut(s) 399, 503, 745, 966, 1630, 1800, 1984, 1992
HinP1I GCGC 8 cut(s) 399, 503, 745, 966, 1630, 1800, 1984, 1992
HincII GTYRAC 1 cut(s) 1912
HindII GTYRAC 1 cut(s) 1912
HindIII AAGCTT 1 cut(s) 1194
HpaII CCGG 4 cut(s) 619, 1806, 2089, 2140
HphI GGTGA 2 cut(s) 530, 1006
Hpy166II GTNNAC 3 cut(s) 462, 1463, 1912
Hpy8I GTNNAC 3 cut(s) 462, 1463, 1912
HpyAV CCTTC 7 cut(s) 448, 451, 571, 701, 1137, 1303, 1794
HpyCH4III ACNGT 2 cut(s) 210, 1931
HpyCH4IV ACGT 4 cut(s) 226, 866, 1356, 2119
HpyCH4V TGCA 5 cut(s) 164, 286, 922, 1154, 1838
HpyF10VI GCNNNNNNNGC 8 cut(s) 85, 283, 801, 1277, 1298, 1385, 1404, 1799
HpySE526I ACGT 4 cut(s) 226, 866, 1356, 2119
Hsp92I GRCGYC 3 cut(s) 704, 966, 2119
HspAI GCGC 8 cut(s) 399, 503, 745, 966, 1630, 1800, 1984, 1992
KasI GGCGCC 1 cut(s) 965
Ksp22I TGATCA 1 cut(s) 1953
KspI CCGCGG 1 cut(s) 1762
Kzo9I GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
LguI GCTCTTC 1 cut(s) 1386
LmnI GCTCC 3 cut(s) 1000, 1201, 2108
Lsp1109I GCAGC 2 cut(s) 866, 1283
MaeI CTAG 4 cut(s) 98, 365, 498, 1797
MaeII ACGT 4 cut(s) 226, 866, 1356, 2119
MaeIII GTNAC 4 cut(s) 787, 1579, 2003, 2027
MalI GATC 7 cut(s) 753, 1494, 1569, 1625, 1949, 1955, 1981
MbiI CCGCTC 3 cut(s) 476, 722, 1170
MboI GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
MboII GAAGA 9 cut(s) 284, 956, 1138, 1373, 1573, 1694, 1699, 1826, 1932
MhlI GDGCHC 7 cut(s) 279, 1058, 1180, 1206, 1621, 1861, 2146
MluCI AATT 8 cut(s) 14, 307, 430, 585, 671, 1031, 1514, 1899
MluI ACGCGT 1 cut(s) 86
Mly113I GGCGCC 1 cut(s) 966
MlyI GAGTC 3 cut(s) 88, 1342, 2158
MmeI TCCRAC 2 cut(s) 1675, 2034
MroXI GAANNNNTTC 2 cut(s) 560, 1145
MseI TTAA 3 cut(s) 138, 615, 696
MslI CAYNNNNRTG 2 cut(s) 810, 1955
MspA1I CMGCKG 1 cut(s) 1761
MspI CCGG 4 cut(s) 619, 1806, 2089, 2140
MspR9I CCNGG 7 cut(s) 50, 620, 885, 1807, 2089, 2090, 2141
Mva1269I GAATGC 1 cut(s) 836
MvaI CCWGG 2 cut(s) 50, 885
MvnI CGCG 9 cut(s) 88, 480, 745, 747, 1407, 1632, 1761, 1984, 1986
MwoI GCNNNNNNNGC 8 cut(s) 85, 283, 801, 1277, 1298, 1385, 1404, 1799
NarI GGCGCC 1 cut(s) 966
NciI CCSGG 5 cut(s) 620, 1807, 2089, 2090, 2141
NcoI CCATGG 1 cut(s) 58
NdeII GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
NmuCI GTSAC 1 cut(s) 2003
NruI TCGCGA 1 cut(s) 480
NsbI TGCGCA 1 cut(s) 1993
NspI RCATGY 1 cut(s) 2044
PaeR7I CTCGAG 1 cut(s) 1466
PagI TCATGA 1 cut(s) 1950
PceI AGGCCT 1 cut(s) 2113
PciSI GCTCTTC 1 cut(s) 1386
PctI GAATGC 1 cut(s) 836
PdmI GAANNNNTTC 2 cut(s) 560, 1145
PfeI GAWTC 7 cut(s) 929, 1015, 1247, 1456, 1663, 2048, 2156
PflMI CCANNNNNTGG 1 cut(s) 75
PkrI GCNGC 5 cut(s) 734, 856, 1273, 1409, 1763
PleI GAGTC 3 cut(s) 88, 1341, 2157
PluTI GGCGCC 1 cut(s) 969
PpsI GAGTC 3 cut(s) 88, 1341, 2157
PpuMI RGGWCCY 3 cut(s) 1160, 1322, 1703
PshAI GACNNNNGTC 1 cut(s) 2022
Psp124BI GAGCTC 1 cut(s) 1206
Psp1406I AACGTT 1 cut(s) 866
Psp5II RGGWCCY 3 cut(s) 1160, 1322, 1703
Psp6I CCWGG 2 cut(s) 48, 883
PspGI CCWGG 2 cut(s) 48, 883
PspPI GGNCC 5 cut(s) 778, 802, 1160, 1322, 1703
PspPPI RGGWCCY 3 cut(s) 1160, 1322, 1703
PspXI VCTCGAGB 1 cut(s) 1466
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 3 cut(s) 848, 1349, 2083
RsaNI GTAC 3 cut(s) 847, 1348, 2082
RseI CAYNNNNRTG 2 cut(s) 810, 1955
SacI GAGCTC 1 cut(s) 1206
SacII CCGCGG 1 cut(s) 1762
SalI GTCGAC 1 cut(s) 1910
SapI GCTCTTC 1 cut(s) 1386
SaqAI TTAA 3 cut(s) 138, 615, 696
SatI GCNGC 5 cut(s) 733, 855, 1272, 1408, 1762
Sau3AI GATC 7 cut(s) 751, 1492, 1567, 1623, 1947, 1953, 1979
Sau96I GGNCC 5 cut(s) 778, 802, 1160, 1322, 1703
SchI GAGTC 3 cut(s) 88, 1342, 2158
ScrFI CCNGG 7 cut(s) 50, 620, 885, 1807, 2089, 2090, 2141
SduI GDGCHC 7 cut(s) 279, 1058, 1180, 1206, 1621, 1861, 2146
SfcI CTRYAG 1 cut(s) 736
SfoI GGCGCC 1 cut(s) 967
Sfr274I CTCGAG 1 cut(s) 1466
Sfr303I CCGCGG 1 cut(s) 1762
SgrBI CCGCGG 1 cut(s) 1762
SgrDI CGTCGACG 1 cut(s) 1910
SinI GGWCC 3 cut(s) 1160, 1322, 1703
SlaI CTCGAG 1 cut(s) 1466
SmaI CCCGGG 1 cut(s) 2090
SmiMI CAYNNNNRTG 2 cut(s) 810, 1955
SmlI CTYRAG 5 cut(s) 632, 1205, 1466, 1529, 2033
SmoI CTYRAG 5 cut(s) 632, 1205, 1466, 1529, 2033
Sse9I AATT 8 cut(s) 14, 307, 430, 585, 671, 1031, 1514, 1899
SseBI AGGCCT 1 cut(s) 2113
SspDI GGCGCC 1 cut(s) 965
SspI AATATT 1 cut(s) 187
SspMI CTAG 4 cut(s) 98, 365, 498, 1797
SstI GAGCTC 1 cut(s) 1206
StuI AGGCCT 1 cut(s) 2113
StyD4I CCNGG 7 cut(s) 48, 618, 883, 1805, 2087, 2088, 2139
StyI CCWWGG 5 cut(s) 58, 74, 364, 682, 1575
TaaI ACNGT 2 cut(s) 210, 1931
TaiI ACGT 4 cut(s) 229, 869, 1359, 2122
TaqII GACCGA 1 cut(s) 269
TasI AATT 8 cut(s) 14, 307, 430, 585, 671, 1031, 1514, 1899
TauI GCSGC 3 cut(s) 735, 1410, 1764
TfiI GAWTC 7 cut(s) 929, 1015, 1247, 1456, 1663, 2048, 2156
Tru1I TTAA 3 cut(s) 138, 615, 696
Tru9I TTAA 3 cut(s) 138, 615, 696
TseFI GTSAC 1 cut(s) 2003
TseI GCWGC 2 cut(s) 854, 1271
Tsp45I GTSAC 1 cut(s) 2003
TspDTI ATGAA 6 cut(s) 467, 829, 1138, 1695, 1827, 2084
TspGWI ACGGA 2 cut(s) 1149, 1513
TspMI CCCGGG 1 cut(s) 2088
Van91I CCANNNNNTGG 1 cut(s) 75
VpaK11BI GGWCC 3 cut(s) 1160, 1322, 1703
XapI RAATTY 4 cut(s) 14, 307, 585, 1899
XbaI TCTAGA 1 cut(s) 97
XceI RCATGY 1 cut(s) 2044
XcmI CCANNNNNNNNNTGG 1 cut(s) 1336
XhoI CTCGAG 1 cut(s) 1466
XmaI CCCGGG 1 cut(s) 2088
XmaJI CCTAGG 1 cut(s) 364
XmiI GTMKAC 1 cut(s) 1911
XmnI GAANNNNTTC 2 cut(s) 560, 1145
XspI CTAG 4 cut(s) 98, 365, 498, 1797
ZraI GACGTC 1 cut(s) 2120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.