Rmu_sc0009135.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009135.1
OG0000480
Physical Location & Seq
Reverse (-)
6186 .. 7334
1149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009135.1_g000005.1.cds

Sequence Viewer

Length: 942 bp
atgacccggatccaattgttatcatcatcaaattcctataaatggagcctcaaatttggctttgaaccaaaacaattggatttgttttgccattggtgtcgtcgcatcccttggctcgtctgcacacggatcgatctcagacgcgcgccgcctcgcctcgccgccgcgcagccgctccagcccccagcgctacgcctgctcggatccagctccagtttgcctgacctccagcgcaacccggccacggtcccagcaccattcgacccatcagcagtcccccgtcgtcccaggcttttgccggcggccttgagttgcgccggtgtcttccctgctgcctgcctcgtcgatccgtgccccctagctcgatcccgtccaggtactcccgaccggcaggctcctattatgatttcgtcagacagttcctctgacaggtcctacaaacactcagggggattctcatttgattttgacactcgtcaattccttgaggatgtgttgaattacccagaggatggtcaagcaagtgctcctcgcgccccgaaggctcgtgctggtcccagtcggcctcgtcgtcggagcatgagtactgacagggggacaagtccggaatctcatcggctccgtactctgagagaggaatctttcgtgctacaggattcgctcgagcatgccctgtcggaggcccgcaatctgaagactgaggtccataacctgtcgttggagcttcaacgctcgagggatcatgcagagtgtttgaaaatagaactccgcgaatgttatcgacgggaaaggtttctggacgaggtccgcgttcaaagtcgtgaagatggatatcgcgatgccgttatcgaataccgtcaacgcatgatactgaactttcccgggatagatgagtcccttttaccatactatgtgggctctgacggcacctcccgaaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

313

Amino Acids

35.53

Weight (kDa)

9.31

Isoelectric Point (pI)

82.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 926
AccB7I CCANNNNNTGG 1 cut(s) 512
AccBSI CCGCTC 1 cut(s) 175
AccII CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
AccIII TCCGGA 1 cut(s) 604
AciI CCGC 8 cut(s) 149, 162, 165, 173, 302, 685, 769, 808
AclWI GGATC 8 cut(s) 4, 17, 137, 198, 211, 341, 360, 747
AcoI YGGCCR 1 cut(s) 240
AcsI RAATTY 2 cut(s) 31, 53
AcuI CTGAAG 1 cut(s) 713
AfaI GTAC 3 cut(s) 379, 586, 625
AfeI AGCGCT 1 cut(s) 189
AfiI CCNNNNNNNGG 6 cut(s) 42, 244, 429, 512, 679, 718
AgsI TTSAA 5 cut(s) 65, 499, 728, 757, 815
AjnI CCWGG 2 cut(s) 287, 373
AluBI AGCT 3 cut(s) 210, 362, 724
AluI AGCT 3 cut(s) 210, 362, 724
Alw21I GWGCWC 1 cut(s) 529
AlwI GGATC 8 cut(s) 4, 17, 137, 198, 211, 341, 360, 747
Ama87I CYCGRG 3 cut(s) 662, 733, 881
Aor13HI TCCGGA 1 cut(s) 604
Aor51HI AGCGCT 1 cut(s) 189
AoxI GGCC 4 cut(s) 240, 303, 563, 681
ApeKI GCWGC 2 cut(s) 169, 332
ApoI RAATTY 2 cut(s) 31, 53
Asp700I GAANNNNTTC 1 cut(s) 792
AspLEI GCGC 7 cut(s) 146, 148, 169, 190, 234, 317, 536
AspS9I GGNCC 6 cut(s) 247, 432, 554, 682, 703, 805
AsuC2I CCSGG 4 cut(s) 7, 239, 882, 883
AvaI CYCGRG 3 cut(s) 662, 733, 881
AvaII GGWCC 5 cut(s) 247, 432, 554, 703, 805
BaeGI GKGCMC 1 cut(s) 356
BamHI GGATCC 2 cut(s) 9, 203
BanI GGYRCC 1 cut(s) 926
BanII GRGCYC 1 cut(s) 920
BauI CACGAG 1 cut(s) 546
BbsI GAAGAC 2 cut(s) 316, 701
Bbv12I GWGCWC 1 cut(s) 529
BbvI GCAGC 2 cut(s) 181, 319
BccI CCATC 3 cut(s) 274, 506, 821
BceAI ACGGC 2 cut(s) 827, 940
BcgI CGANNNNNNTGC 2 cut(s) 112, 146
BciT130I CCWGG 2 cut(s) 289, 375
BcnI CCSGG 4 cut(s) 7, 239, 882, 883
BfaI CTAG 1 cut(s) 359
BfmI CTRYAG 1 cut(s) 650
BfoI RGCGCY 1 cut(s) 191
BglI GCCNNNNNGGC 1 cut(s) 542
BisI GCNGC 7 cut(s) 149, 162, 165, 170, 173, 303, 333
BlsI GCNGC 7 cut(s) 150, 163, 166, 171, 174, 304, 334
BmcAI AGTACT 1 cut(s) 586
Bme1390I CCNGG 6 cut(s) 7, 239, 289, 375, 882, 883
Bme18I GGWCC 5 cut(s) 247, 432, 554, 703, 805
BmeT110I CYCGRG 3 cut(s) 662, 733, 881
BmgT120I GGNCC 6 cut(s) 247, 432, 554, 682, 703, 805
BmiI GGNNCC 8 cut(s) 11, 47, 205, 249, 396, 556, 620, 928
BmrFI CCNGG 6 cut(s) 7, 239, 289, 375, 882, 883
BmrI ACTGGG 1 cut(s) 552
BmsI GCATC 2 cut(s) 114, 829
BmuI ACTGGG 1 cut(s) 552
BoxI GACNNNNGTC 2 cut(s) 474, 701
BpiI GAAGAC 2 cut(s) 316, 701
BpmI CTGGAG 3 cut(s) 161, 196, 212
BpuEI CTTGAG 2 cut(s) 328, 506
BpuMI CCSGG 4 cut(s) 7, 239, 882, 883
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 831
BsaJI CCNNGG 4 cut(s) 110, 243, 287, 881
BsaWI WCCGGW 1 cut(s) 604
BsaXI ACNNNNNCTCC 3 cut(s) 568, 598, 914
Bsc4I CCNNNNNNNGG 6 cut(s) 42, 244, 429, 512, 679, 718
Bse118I RCCGGY 3 cut(s) 298, 317, 387
Bse1I ACTGG 2 cut(s) 213, 558
Bse8I GATNNNNATC 1 cut(s) 831
BseAI TCCGGA 1 cut(s) 604
BseBI CCWGG 2 cut(s) 289, 375
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 4 cut(s) 110, 243, 287, 881
BseGI GGATG 3 cut(s) 105, 496, 517
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 6 cut(s) 42, 244, 429, 512, 679, 718
BseMII CTCAG 4 cut(s) 151, 459, 620, 690
BseNI ACTGG 2 cut(s) 213, 558
BsePI GCGCGC 1 cut(s) 144
BseRI GAGGAG 1 cut(s) 519
BseSI GKGCMC 1 cut(s) 356
BseXI GCAGC 2 cut(s) 181, 319
BseYI CCCAGC 2 cut(s) 184, 250
BsgI GTGCAG 1 cut(s) 106
Bsh1236I CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
Bsh1285I CGRYCG 1 cut(s) 388
BshFI GGCC 4 cut(s) 242, 305, 565, 683
BshNI GGYRCC 1 cut(s) 926
BshVI ATCGAT 1 cut(s) 132
BsiEI CGRYCG 1 cut(s) 388
BsiHKAI GWGCWC 1 cut(s) 529
BsiHKCI CYCGRG 3 cut(s) 662, 733, 881
BsiSI CCGG 7 cut(s) 7, 239, 299, 318, 388, 605, 882
BslFI GGGAC 6 cut(s) 233, 260, 270, 540, 610, 880
BslI CCNNNNNNNGG 6 cut(s) 42, 244, 429, 512, 679, 718
BsmFI GGGAC 6 cut(s) 233, 260, 270, 540, 610, 880
BsnI GGCC 4 cut(s) 242, 305, 565, 683
BsoBI CYCGRG 3 cut(s) 662, 733, 881
Bsp1286I GDGCHC 3 cut(s) 356, 529, 920
Bsp13I TCCGGA 1 cut(s) 604
Bsp143I GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
Bsp68I TCGCGA 1 cut(s) 837
BspACI CCGC 8 cut(s) 149, 162, 165, 173, 302, 685, 769, 808
BspANI GGCC 4 cut(s) 242, 305, 565, 683
BspCNI CTCAG 4 cut(s) 150, 458, 621, 691
BspDI ATCGAT 1 cut(s) 132
BspEI TCCGGA 1 cut(s) 604
BspFNI CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
BspLI GGNNCC 8 cut(s) 11, 47, 205, 249, 396, 556, 620, 928
BspPI GGATC 8 cut(s) 4, 17, 137, 198, 211, 341, 360, 747
BspT107I GGYRCC 1 cut(s) 926
BsrBI CCGCTC 1 cut(s) 175
BsrFI RCCGGY 3 cut(s) 298, 317, 387
BsrI ACTGG 2 cut(s) 213, 558
BssAI RCCGGY 3 cut(s) 298, 317, 387
BssECI CCNNGG 4 cut(s) 110, 243, 287, 881
BssHII GCGCGC 1 cut(s) 144
BssMI GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 110
Bst2BI CACGAG 1 cut(s) 546
Bst2UI CCWGG 2 cut(s) 289, 375
Bst4CI ACNGT 3 cut(s) 247, 419, 857
BstC8I GCNNGC 7 cut(s) 146, 197, 300, 337, 393, 669, 685
BstDEI CTNAG 4 cut(s) 137, 445, 629, 699
BstDSI CCRYGG 1 cut(s) 243
BstENI CCTNNNNNAGG 2 cut(s) 427, 677
BstF5I GGATG 3 cut(s) 105, 496, 517
BstFNI CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
BstH2I RGCGCY 1 cut(s) 191
BstHHI GCGC 7 cut(s) 146, 148, 169, 190, 234, 317, 536
BstKTI GATC 7 cut(s) 12, 132, 136, 206, 349, 368, 742
BstMBI GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
BstMCI CGRYCG 1 cut(s) 388
BstMWI GCNNNNNNNGC 6 cut(s) 178, 187, 196, 533, 542, 924
BstNI CCWGG 2 cut(s) 289, 375
BstNSI RCATGY 1 cut(s) 671
BstPAI GACNNNNGTC 2 cut(s) 474, 701
BstSCI CCNGG 6 cut(s) 5, 237, 287, 373, 880, 881
BstSFI CTRYAG 1 cut(s) 650
BstSLI GKGCMC 1 cut(s) 356
BstUI CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
BstV1I GCAGC 2 cut(s) 181, 319
BstV2I GAAGAC 2 cut(s) 316, 701
BstX2I RGATCY 2 cut(s) 9, 203
BstYI RGATCY 2 cut(s) 9, 203
Bsu15I ATCGAT 1 cut(s) 132
BsuRI GGCC 4 cut(s) 242, 305, 565, 683
BsuTUI ATCGAT 1 cut(s) 132
BtgI CCRYGG 1 cut(s) 243
BtgZI GCGATG 1 cut(s) 852
BtsCI GGATG 3 cut(s) 105, 496, 517
BtuMI TCGCGA 1 cut(s) 837
Cac8I GCNNGC 7 cut(s) 146, 197, 300, 337, 393, 669, 685
CfoI GCGC 7 cut(s) 146, 148, 169, 190, 234, 317, 536
Cfr10I RCCGGY 3 cut(s) 298, 317, 387
Cfr13I GGNCC 6 cut(s) 247, 432, 554, 682, 703, 805
Cfr9I CCCGGG 1 cut(s) 881
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 1 cut(s) 150
Csp6I GTAC 3 cut(s) 378, 585, 624
CviAII CATG 4 cut(s) 580, 668, 743, 865
CviQI GTAC 3 cut(s) 378, 585, 624
DdeI CTNAG 4 cut(s) 137, 445, 629, 699
DpnI GATC 7 cut(s) 11, 131, 135, 205, 348, 367, 741
DpnII GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
EaeI YGGCCR 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 110
Eco24I GRGCYC 1 cut(s) 920
Eco32I GATATC 1 cut(s) 833
Eco47I GGWCC 5 cut(s) 247, 432, 554, 703, 805
Eco47III AGCGCT 1 cut(s) 189
Eco57I CTGAAG 1 cut(s) 713
Eco88I CYCGRG 3 cut(s) 662, 733, 881
EcoNI CCTNNNNNAGG 2 cut(s) 427, 677
EcoO109I RGGNCCY 1 cut(s) 432
EcoRII CCWGG 2 cut(s) 287, 373
EcoRV GATATC 1 cut(s) 833
EcoT14I CCWWGG 1 cut(s) 110
EcoT38I GRGCYC 1 cut(s) 920
ErhI CCWWGG 1 cut(s) 110
FaeI CATG 4 cut(s) 583, 671, 746, 868
FaiI YATR 9 cut(s) 39, 404, 581, 669, 708, 744, 866, 907, 912
FaqI GGGAC 6 cut(s) 233, 260, 270, 540, 610, 880
FatI CATG 4 cut(s) 579, 667, 742, 864
FauI CCCGC 1 cut(s) 692
Fnu4HI GCNGC 7 cut(s) 149, 162, 165, 170, 173, 303, 333
FokI GGATG 3 cut(s) 92, 503, 524
FriOI GRGCYC 1 cut(s) 920
Fsp4HI GCNGC 7 cut(s) 149, 162, 165, 170, 173, 303, 333
FspBI CTAG 1 cut(s) 359
GlaI GCGC 7 cut(s) 145, 147, 168, 189, 233, 316, 535
GluI GCNGC 7 cut(s) 149, 162, 165, 170, 173, 303, 333
GsaI CCCAGC 2 cut(s) 188, 254
GsuI CTGGAG 3 cut(s) 161, 196, 212
HaeII RGCGCY 1 cut(s) 191
HaeIII GGCC 4 cut(s) 242, 305, 565, 683
HapII CCGG 7 cut(s) 7, 239, 299, 318, 388, 605, 882
HgaI GACGC 1 cut(s) 150
HhaI GCGC 7 cut(s) 146, 148, 169, 190, 234, 317, 536
Hin1II CATG 4 cut(s) 583, 671, 746, 868
Hin6I GCGC 7 cut(s) 144, 146, 167, 188, 232, 315, 534
HinP1I GCGC 7 cut(s) 144, 146, 167, 188, 232, 315, 534
HincII GTYRAC 1 cut(s) 860
HindII GTYRAC 1 cut(s) 860
HinfI GANTC 5 cut(s) 453, 608, 638, 656, 893
HpaII CCGG 7 cut(s) 7, 239, 299, 318, 388, 605, 882
Hpy166II GTNNAC 1 cut(s) 860
Hpy188I TCNGA 9 cut(s) 140, 203, 415, 427, 576, 630, 679, 693, 922
Hpy188III TCNNGA 6 cut(s) 383, 605, 797, 821, 836, 933
Hpy8I GTNNAC 1 cut(s) 860
Hpy99I CGWCG 6 cut(s) 105, 285, 347, 573, 576, 786
HpyAV CCTTC 1 cut(s) 535
HpyCH4III ACNGT 3 cut(s) 247, 419, 857
HpyCH4V TGCA 2 cut(s) 123, 746
HpyF10VI GCNNNNNNNGC 6 cut(s) 178, 187, 196, 533, 542, 924
HpyF3I CTNAG 4 cut(s) 137, 445, 629, 699
Hsp92II CATG 4 cut(s) 583, 671, 746, 868
HspAI GCGC 7 cut(s) 144, 146, 167, 188, 232, 315, 534
Kpn2I TCCGGA 1 cut(s) 604
KroI GCCGGC 1 cut(s) 298
KroNI GCCGGC 1 cut(s) 300
Kzo9I GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
LmnI GCTCC 8 cut(s) 45, 180, 215, 400, 532, 576, 624, 721
Lsp1109I GCAGC 2 cut(s) 181, 319
LweI GCATC 2 cut(s) 114, 829
MaeI CTAG 1 cut(s) 359
MalI GATC 7 cut(s) 11, 131, 135, 205, 348, 367, 741
MbiI CCGCTC 1 cut(s) 175
MboI GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
MboII GAAGA 3 cut(s) 316, 706, 836
MfeI CAATTG 2 cut(s) 14, 74
MflI RGATCY 2 cut(s) 9, 203
MhlI GDGCHC 3 cut(s) 356, 529, 920
MluCI AATT 7 cut(s) 14, 31, 53, 74, 479, 499, 937
MlyI GAGTC 1 cut(s) 902
MmeI TCCRAC 3 cut(s) 554, 657, 699
MroI TCCGGA 1 cut(s) 604
MroNI GCCGGC 1 cut(s) 298
MroXI GAANNNNTTC 1 cut(s) 792
MspI CCGG 7 cut(s) 7, 239, 299, 318, 388, 605, 882
MspR9I CCNGG 6 cut(s) 7, 239, 289, 375, 882, 883
MunI CAATTG 2 cut(s) 14, 74
MvaI CCWGG 2 cut(s) 289, 375
MvnI CGCG 7 cut(s) 144, 146, 167, 534, 771, 810, 837
MwoI GCNNNNNNNGC 6 cut(s) 178, 187, 196, 533, 542, 924
NaeI GCCGGC 1 cut(s) 300
NciI CCSGG 4 cut(s) 7, 239, 882, 883
NdeII GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
NgoMIV GCCGGC 1 cut(s) 298
NlaIII CATG 4 cut(s) 583, 671, 746, 868
NlaIV GGNNCC 8 cut(s) 11, 47, 205, 249, 396, 556, 620, 928
NruI TCGCGA 1 cut(s) 837
NspI RCATGY 1 cut(s) 671
PaeI GCATGC 1 cut(s) 671
PaeR7I CTCGAG 2 cut(s) 662, 733
PauI GCGCGC 1 cut(s) 144
PcsI WCGNNNNNNNCGW 2 cut(s) 568, 807
PdiI GCCGGC 1 cut(s) 300
PdmI GAANNNNTTC 1 cut(s) 792
PfeI GAWTC 4 cut(s) 453, 608, 638, 656
PflFI GACNNNGTC 1 cut(s) 803
PflMI CCANNNNNTGG 1 cut(s) 512
PkrI GCNGC 7 cut(s) 150, 163, 166, 171, 174, 304, 334
PleI GAGTC 1 cut(s) 901
PpsI GAGTC 1 cut(s) 901
PpuMI RGGWCCY 1 cut(s) 432
PshAI GACNNNNGTC 2 cut(s) 474, 701
Psp5II RGGWCCY 1 cut(s) 432
Psp6I CCWGG 2 cut(s) 287, 373
PspFI CCCAGC 2 cut(s) 184, 250
PspGI CCWGG 2 cut(s) 287, 373
PspN4I GGNNCC 8 cut(s) 11, 47, 205, 249, 396, 556, 620, 928
PspPI GGNCC 6 cut(s) 247, 432, 554, 682, 703, 805
PspPPI RGGWCCY 1 cut(s) 432
PspXI VCTCGAGB 2 cut(s) 662, 733
PsuI RGATCY 2 cut(s) 9, 203
PsyI GACNNNGTC 1 cut(s) 803
PteI GCGCGC 1 cut(s) 144
RruI TCGCGA 1 cut(s) 837
RsaI GTAC 3 cut(s) 379, 586, 625
RsaNI GTAC 3 cut(s) 378, 585, 624
SatI GCNGC 7 cut(s) 149, 162, 165, 170, 173, 303, 333
Sau3AI GATC 7 cut(s) 9, 129, 133, 203, 346, 365, 739
Sau96I GGNCC 6 cut(s) 247, 432, 554, 682, 703, 805
ScaI AGTACT 1 cut(s) 586
SchI GAGTC 1 cut(s) 902
ScrFI CCNGG 6 cut(s) 7, 239, 289, 375, 882, 883
SduI GDGCHC 3 cut(s) 356, 529, 920
SfaNI GCATC 2 cut(s) 114, 829
SfcI CTRYAG 1 cut(s) 650
Sfr274I CTCGAG 2 cut(s) 662, 733
SgrAI CRCCGGYG 1 cut(s) 317
SinI GGWCC 5 cut(s) 247, 432, 554, 703, 805
SlaI CTCGAG 2 cut(s) 662, 733
SmaI CCCGGG 1 cut(s) 883
SmlI CTYRAG 4 cut(s) 307, 485, 662, 733
SmoI CTYRAG 4 cut(s) 307, 485, 662, 733
SphI GCATGC 1 cut(s) 671
Sse9I AATT 7 cut(s) 14, 31, 53, 74, 479, 499, 937
SsiI CCGC 8 cut(s) 149, 162, 165, 173, 302, 685, 769, 808
SspMI CTAG 1 cut(s) 359
StyD4I CCNGG 6 cut(s) 5, 237, 287, 373, 880, 881
StyI CCWWGG 1 cut(s) 110
TaaI ACNGT 3 cut(s) 247, 419, 857
TaqI TCGA 8 cut(s) 132, 261, 345, 364, 663, 734, 781, 849
TasI AATT 7 cut(s) 14, 31, 53, 74, 479, 499, 937
TatI WGTACW 1 cut(s) 584
TauI GCSGC 5 cut(s) 151, 164, 167, 175, 305
TfiI GAWTC 4 cut(s) 453, 608, 638, 656
TseI GCWGC 2 cut(s) 169, 332
TspGWI ACGGA 3 cut(s) 142, 339, 611
TspMI CCCGGG 1 cut(s) 881
Tth111I GACNNNGTC 1 cut(s) 803
Van91I CCANNNNNTGG 1 cut(s) 512
VpaK11BI GGWCC 5 cut(s) 247, 432, 554, 703, 805
XagI CCTNNNNNAGG 2 cut(s) 427, 677
XapI RAATTY 2 cut(s) 31, 53
XceI RCATGY 1 cut(s) 671
XhoI CTCGAG 2 cut(s) 662, 733
XmaI CCCGGG 1 cut(s) 881
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 1 cut(s) 359
ZrmI AGTACT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.