Rmu_sc0005507.1_g000023

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005507.1
OG0000480
Physical Location & Seq
Reverse (-)
85371 .. 87476
2106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005507.1_g000023.1.cds

Sequence Viewer

Length: 1929 bp
atggctcgcattaagtacacagacttggcgaaatcccaaaagaaaagtctggagccaatcgatgaacctacaccttggaaaccaaccgctcaagaaatagagaaatatgctacaacgtacgcggtctcaaagtccgtcaaactttcctcgattcctgacgatgccgatatctacactggcgagaatgtgcctggtgacaccttgatattgtctctttctcatctgaggtttatcaggtttccaattcatcctattttccaattagtgtggagggtccttggcgtgcacccaatgcaatttcacccgaatgcttatcttttcttgtcttctttcttgatcatgggttggaaatggggtgtttccctgggtttatcagattttcttcatcttttcaactgggtcagaacaggcaagcttcgatatttcaacttttctccatacccgaagatgaagatattcgcaggcgtgacgattagtcatccgggatggaggtccaaagccttgatgatctctggcaaatggcgatctccagaattagacctttcgcctccagctgctttcgctgacgaccttgcttacaaactttccctggctaagattgatcttccctctggtcgtgtagcatggttggaaagccatcttgttgggggcgactggtgcccttcccaattcgtaactatcgggaatctagcagaggccgcatctattcggccttcagccctatttggtcgttatcgagaacctgtggactctacactctcagggagagagttggcggtcctcgttgcccagattgagagcgttttttccaggtctgaatgttgtgaggctttgtttgctacatatgaggaagtgaaaagtgatttccgtgccaccatcccttgtccggacgccaccgtcgcaaggggatatggtgtggagggaaacttggatgaagaagaagaatttcaggttaatacaatagaagaagagcctttgttgcatgcagtgagagatctctctcacacgattcctccccctcgacgatttaggaaacgtaaggcagaaaatcttgtcaatggctccgaatcatcccatctttctgcagaagggttggcgcaagatacgttaccgcctcctctcgcacgtggtgattcatcctttacacaacttctacaacccttgttggaaactgttcgtgacgcatctgcacaaaacatcattctgccacaagctaatcctcctgtctcgaattccccctcgtcatataggatcctggaattgagctttaaaaagcgcgacaactcctttgttctggcggaagagccccttctttctaacgggccagccgcgtcggcagtggctgccacctttgcatcgttgaagcctattccggggccgttccccaaaagtcctatggatttttataatgacttgtgtgcctctcagctcgatgctcttatggcgtctcaccagttcttgtgtagtctcgatggtctccattccaaacaacagcaaaagttggaggatgctaactctcaactgaaggacaaagaccgccaacttctagccaaggaacatgaaattgaggagcagtcccaagtgatggcagagctaggtcacattgttgaagagaaaaaccatcagatagcgcaactgaaaactgagctggccgtagtgatgcaaagcaaggacgaggaataccaaaagggagttgctcagataaaaagagtttccgccaagaatttctggcttggttggaaccaagccttgacgaaagaggaggacaggtgttatcctagtcccgacgagtttgaccgatattacgggttcattccgagtggctattctcctattcggggcatgattccgggggacgtcccattgccagtgtctagtgtcagtgaaggtcatggcattgatgatggtgaagcatcgtcagctccttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

642

Amino Acids

71.44

Weight (kDa)

5.56

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1407
AasI GACNNNNNNGTC 1 cut(s) 896
AatII GACGTC 1 cut(s) 1860
AccB1I GGYRCC 1 cut(s) 657
AccB7I CCANNNNNTGG 1 cut(s) 1585
AccBSI CCGCTC 1 cut(s) 89
AccII CGCG 3 cut(s) 122, 1278, 1331
AccIII TCCGGA 1 cut(s) 886
AciI CCGC 9 cut(s) 87, 122, 699, 776, 1112, 1298, 1329, 1537, 1716
AclWI GGATC 2 cut(s) 1246, 1259
AcoI YGGCCR 1 cut(s) 1650
AcsI RAATTY 3 cut(s) 944, 1231, 1723
AcuI CTGAAG 2 cut(s) 699, 1544
AcvI CACGTG 1 cut(s) 1127
AcyI GRCGYC 3 cut(s) 891, 1445, 1857
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 2 cut(s) 17, 119
AfiI CCNNNNNNNGG 5 cut(s) 886, 903, 1373, 1585, 1838
AgsI TTSAA 4 cut(s) 394, 427, 1363, 1610
AhdI GACNNNNNGTC 1 cut(s) 474
AjnI CCWGG 5 cut(s) 190, 363, 588, 809, 1254
AluBI AGCT 8 cut(s) 415, 554, 1214, 1266, 1429, 1594, 1648, 1922
AluI AGCT 8 cut(s) 415, 554, 1214, 1266, 1429, 1594, 1648, 1922
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 6 cut(s) 130, 216, 1231, 1452, 1472, 1481
Alw44I GTGCAC 1 cut(s) 284
AlwI GGATC 2 cut(s) 1246, 1259
AlwNI CAGNNNCTG 1 cut(s) 1343
Aor13HI TCCGGA 1 cut(s) 886
AoxI GGCC 5 cut(s) 696, 710, 1322, 1376, 1650
ApaLI GTGCAC 1 cut(s) 284
ApeKI GCWGC 2 cut(s) 554, 1343
ApoI RAATTY 3 cut(s) 944, 1231, 1723
ArsI GACNNNNNNTTYG 4 cut(s) 31, 63, 1271, 1303
Asp700I GAANNNNTTC 3 cut(s) 455, 945, 1173
AspLEI GCGC 3 cut(s) 1099, 1278, 1633
AspS9I GGNCC 5 cut(s) 274, 492, 778, 1322, 1376
AsuC2I CCSGG 3 cut(s) 483, 1374, 1851
AsuHPI GGTGA 5 cut(s) 206, 293, 1142, 1442, 1919
AvaII GGWCC 3 cut(s) 274, 492, 778
BaeGI GKGCMC 2 cut(s) 288, 662
BamHI GGATCC 1 cut(s) 1251
BanI GGYRCC 1 cut(s) 657
BanII GRGCYC 1 cut(s) 1308
BbrPI CACGTG 1 cut(s) 1127
BbsI GAAGAC 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 2 cut(s) 541, 1330
BccI CCATC 8 cut(s) 480, 645, 884, 1083, 1466, 1579, 1629, 1898
BceAI ACGGC 2 cut(s) 1363, 1637
BciT130I CCWGG 5 cut(s) 192, 365, 590, 811, 1256
BclI TGATCA 1 cut(s) 336
BcnI CCSGG 3 cut(s) 483, 1374, 1851
BcoDI GTCTC 6 cut(s) 130, 216, 1231, 1452, 1472, 1481
BfaI CTAG 5 cut(s) 689, 1547, 1595, 1779, 1875
BfmI CTRYAG 1 cut(s) 1083
BglI GCCNNNNNGGC 1 cut(s) 1334
BglII AGATCT 1 cut(s) 994
BisI GCNGC 4 cut(s) 555, 699, 1329, 1344
BlsI GCNGC 4 cut(s) 556, 700, 1330, 1345
Bme1390I CCNGG 8 cut(s) 192, 365, 483, 590, 811, 1256, 1374, 1851
Bme18I GGWCC 3 cut(s) 274, 492, 778
BmeRI GACNNNNNGTC 1 cut(s) 474
BmgT120I GGNCC 5 cut(s) 274, 492, 778, 1322, 1376
BmiI GGNNCC 7 cut(s) 54, 275, 659, 1063, 1253, 1377, 1742
BmrFI CCNGG 8 cut(s) 192, 365, 483, 590, 811, 1256, 1374, 1851
BmrI ACTGGG 1 cut(s) 406
BmsI GCATC 8 cut(s) 151, 710, 1193, 1364, 1423, 1498, 1650, 1922
BmuI ACTGGG 1 cut(s) 406
BpiI GAAGAC 1 cut(s) 318
BpmI CTGGAG 3 cut(s) 71, 513, 534
BpuEI CTTGAG 1 cut(s) 75
BpuMI CCSGG 3 cut(s) 483, 1374, 1851
Bsa29I ATCGAT 1 cut(s) 60
BsaAI YACGTR 1 cut(s) 1127
BsaHI GRCGYC 3 cut(s) 891, 1445, 1857
BsaI GGTCTC 2 cut(s) 130, 1481
BsaJI CCNNGG 8 cut(s) 74, 277, 363, 364, 588, 1373, 1551, 1850
BsaWI WCCGGW 1 cut(s) 886
BsaXI ACNNNNNCTCC 4 cut(s) 997, 1027, 1754, 1784
Bsc4I CCNNNNNNNGG 5 cut(s) 886, 903, 1373, 1585, 1838
Bse1I ACTGG 5 cut(s) 181, 401, 659, 1453, 1868
Bse3DI GCAATG 1 cut(s) 1862
BseAI TCCGGA 1 cut(s) 886
BseBI CCWGG 5 cut(s) 192, 365, 590, 811, 1256
BseCI ATCGAT 1 cut(s) 60
BseDI CCNNGG 8 cut(s) 74, 277, 363, 364, 588, 1373, 1551, 1850
BseGI GGATG 8 cut(s) 247, 478, 491, 876, 937, 1070, 1136, 1513
BseLI CCNNNNNNNGG 5 cut(s) 886, 903, 1373, 1585, 1838
BseMI GCAATG 1 cut(s) 1862
BseMII CTCAG 5 cut(s) 215, 774, 1439, 1635, 1712
BseNI ACTGG 5 cut(s) 181, 401, 659, 1453, 1868
BseRI GAGGAG 3 cut(s) 1107, 1583, 1775
BseSI GKGCMC 2 cut(s) 288, 662
BseXI GCAGC 2 cut(s) 541, 1330
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 3 cut(s) 122, 1278, 1331
BshFI GGCC 5 cut(s) 698, 712, 1324, 1378, 1652
BshNI GGYRCC 1 cut(s) 657
BshVI ATCGAT 1 cut(s) 60
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 4 cut(s) 482, 887, 1373, 1850
BsiWI CGTACG 1 cut(s) 117
BslFI GGGAC 4 cut(s) 1561, 1767, 1844, 1868
BslI CCNNNNNNNGG 5 cut(s) 886, 903, 1373, 1585, 1838
BsmAI GTCTC 6 cut(s) 130, 216, 1231, 1452, 1472, 1481
BsmBI CGTCTC 1 cut(s) 1452
BsmFI GGGAC 4 cut(s) 1561, 1767, 1844, 1868
BsmI GAATGC 1 cut(s) 313
BsnI GGCC 5 cut(s) 698, 712, 1324, 1378, 1652
Bso31I GGTCTC 2 cut(s) 130, 1481
Bsp1286I GDGCHC 3 cut(s) 288, 662, 1308
Bsp13I TCCGGA 1 cut(s) 886
Bsp143I GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
BspACI CCGC 9 cut(s) 87, 122, 699, 776, 1112, 1298, 1329, 1537, 1716
BspANI GGCC 5 cut(s) 698, 712, 1324, 1378, 1652
BspCNI CTCAG 5 cut(s) 216, 773, 1438, 1636, 1711
BspDI ATCGAT 1 cut(s) 60
BspEI TCCGGA 1 cut(s) 886
BspFNI CGCG 3 cut(s) 122, 1278, 1331
BspLI GGNNCC 7 cut(s) 54, 275, 659, 1063, 1253, 1377, 1742
BspMAI CTGCAG 1 cut(s) 1087
BspPI GGATC 2 cut(s) 1246, 1259
BspQI GCTCTTC 2 cut(s) 963, 1296
BspT107I GGYRCC 1 cut(s) 657
BspTNI GGTCTC 2 cut(s) 130, 1481
BsrBI CCGCTC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 1862
BsrI ACTGG 5 cut(s) 181, 401, 659, 1453, 1868
BssECI CCNNGG 8 cut(s) 74, 277, 363, 364, 588, 1373, 1551, 1850
BssMI GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
BssNI GRCGYC 3 cut(s) 891, 1445, 1857
BssT1I CCWWGG 3 cut(s) 74, 277, 1551
Bst2UI CCWGG 5 cut(s) 192, 365, 590, 811, 1256
Bst4CI ACNGT 2 cut(s) 898, 1174
Bst6I CTCTTC 3 cut(s) 963, 1296, 1605
BstACI GRCGYC 3 cut(s) 891, 1445, 1857
BstAPI GCANNNNNTGC 2 cut(s) 292, 1343
BstBAI YACGTR 1 cut(s) 1127
BstC8I GCNNGC 7 cut(s) 7, 284, 413, 463, 984, 1326, 1650
BstDEI CTNAG 6 cut(s) 224, 594, 760, 1425, 1644, 1698
BstF5I GGATG 8 cut(s) 247, 478, 491, 876, 937, 1070, 1136, 1513
BstFNI CGCG 3 cut(s) 122, 1278, 1331
BstHHI GCGC 3 cut(s) 1099, 1278, 1633
BstKTI GATC 6 cut(s) 339, 510, 527, 604, 997, 1254
BstMAI GTCTC 6 cut(s) 130, 216, 1231, 1452, 1472, 1481
BstMBI GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
BstNI CCWGG 5 cut(s) 192, 365, 590, 811, 1256
BstNSI RCATGY 1 cut(s) 986
BstSCI CCNGG 8 cut(s) 190, 363, 481, 588, 809, 1254, 1372, 1849
BstSFI CTRYAG 1 cut(s) 1083
BstSLI GKGCMC 2 cut(s) 288, 662
BstUI CGCG 3 cut(s) 122, 1278, 1331
BstV1I GCAGC 2 cut(s) 541, 1330
BstV2I GAAGAC 1 cut(s) 318
BstX2I RGATCY 2 cut(s) 994, 1251
BstXI CCANNNNNNTGG 1 cut(s) 644
BstYI RGATCY 2 cut(s) 994, 1251
Bsu15I ATCGAT 1 cut(s) 60
BsuRI GGCC 5 cut(s) 698, 712, 1324, 1378, 1652
BsuTUI ATCGAT 1 cut(s) 60
BtsCI GGATG 8 cut(s) 247, 478, 491, 876, 937, 1070, 1136, 1513
BtsI GCAGTG 2 cut(s) 993, 1344
BtsIMutI CAGTG 5 cut(s) 174, 993, 1344, 1875, 1888
Cac8I GCNNGC 7 cut(s) 7, 284, 413, 463, 984, 1326, 1650
CaiI CAGNNNCTG 1 cut(s) 1343
CfoI GCGC 3 cut(s) 1099, 1278, 1633
Cfr13I GGNCC 5 cut(s) 274, 492, 778, 1322, 1376
ClaI ATCGAT 1 cut(s) 60
CseI GACGC 4 cut(s) 899, 1190, 1320, 1434
Csp6I GTAC 2 cut(s) 16, 118
CspCI CAANNNNNGTGG 2 cut(s) 248, 283
CviAII CATG 6 cut(s) 340, 624, 983, 1559, 1843, 1892
CviQI GTAC 2 cut(s) 16, 118
DdeI CTNAG 6 cut(s) 224, 594, 760, 1425, 1644, 1698
DpnI GATC 6 cut(s) 338, 509, 526, 603, 996, 1253
DpnII GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
DraI TTTAAA 1 cut(s) 1270
DraIII CACNNNGTG 1 cut(s) 1130
DrdI GACNNNNNNGTC 1 cut(s) 896
DriI GACNNNNNGTC 1 cut(s) 474
DseDI GACNNNNNNGTC 1 cut(s) 896
EaeI YGGCCR 1 cut(s) 1650
Eam1104I CTCTTC 3 cut(s) 963, 1296, 1605
Eam1105I GACNNNNNGTC 1 cut(s) 474
EarI CTCTTC 3 cut(s) 963, 1296, 1605
EciI GGCGGA 2 cut(s) 1313, 1705
Eco130I CCWWGG 3 cut(s) 74, 277, 1551
Eco24I GRGCYC 1 cut(s) 1308
Eco31I GGTCTC 2 cut(s) 130, 1481
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 3 cut(s) 274, 492, 778
Eco57I CTGAAG 2 cut(s) 699, 1544
Eco72I CACGTG 1 cut(s) 1127
EcoO109I RGGNCCY 1 cut(s) 274
EcoRI GAATTC 1 cut(s) 1231
EcoRII CCWGG 5 cut(s) 190, 363, 588, 809, 1254
EcoRV GATATC 1 cut(s) 169
EcoT14I CCWWGG 3 cut(s) 74, 277, 1551
EcoT38I GRGCYC 1 cut(s) 1308
ErhI CCWWGG 3 cut(s) 74, 277, 1551
Esp3I CGTCTC 1 cut(s) 1452
FaeI CATG 6 cut(s) 343, 627, 986, 1562, 1846, 1895
FalI AAGNNNNNCTT 2 cut(s) 1293, 1325
FaqI GGGAC 4 cut(s) 1561, 1767, 1844, 1868
FatI CATG 6 cut(s) 339, 623, 982, 1558, 1842, 1891
FauNDI CATATG 1 cut(s) 844
FbaI TGATCA 1 cut(s) 336
Fnu4HI GCNGC 4 cut(s) 555, 699, 1329, 1344
FokI GGATG 8 cut(s) 234, 465, 498, 863, 944, 1057, 1123, 1520
FriOI GRGCYC 1 cut(s) 1308
Fsp4HI GCNGC 4 cut(s) 555, 699, 1329, 1344
FspBI CTAG 5 cut(s) 689, 1547, 1595, 1779, 1875
GlaI GCGC 3 cut(s) 1098, 1277, 1632
GluI GCNGC 4 cut(s) 555, 699, 1329, 1344
GsuI CTGGAG 3 cut(s) 71, 513, 534
HaeIII GGCC 5 cut(s) 698, 712, 1324, 1378, 1652
HapII CCGG 4 cut(s) 482, 887, 1373, 1850
HgaI GACGC 4 cut(s) 899, 1190, 1320, 1434
HhaI GCGC 3 cut(s) 1099, 1278, 1633
Hin1I GRCGYC 3 cut(s) 891, 1445, 1857
Hin1II CATG 6 cut(s) 343, 627, 986, 1562, 1846, 1895
Hin6I GCGC 3 cut(s) 1097, 1276, 1631
HinP1I GCGC 3 cut(s) 1097, 1276, 1631
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 7 cut(s) 151, 685, 749, 1009, 1067, 1133, 1846
HpaII CCGG 4 cut(s) 482, 887, 1373, 1850
HphI GGTGA 5 cut(s) 206, 293, 1142, 1442, 1919
Hpy166II GTNNAC 3 cut(s) 18, 286, 748
Hpy188I TCNGA 8 cut(s) 225, 376, 404, 817, 1066, 1626, 1701, 1818
Hpy8I GTNNAC 3 cut(s) 18, 286, 748
Hpy99I CGWCG 4 cut(s) 902, 1026, 1336, 1790
HpyAV CCTTC 6 cut(s) 672, 723, 1082, 1319, 1519, 1880
HpyCH4III ACNGT 2 cut(s) 898, 1174
HpyCH4IV ACGT 5 cut(s) 116, 1036, 1106, 1126, 1857
HpyCH4V TGCA 8 cut(s) 286, 295, 982, 986, 1085, 1190, 1355, 1663
HpyF3I CTNAG 6 cut(s) 224, 594, 760, 1425, 1644, 1698
HpySE526I ACGT 5 cut(s) 116, 1036, 1106, 1126, 1857
Hsp92I GRCGYC 3 cut(s) 891, 1445, 1857
Hsp92II CATG 6 cut(s) 343, 627, 986, 1562, 1846, 1895
HspAI GCGC 3 cut(s) 1097, 1276, 1631
Kpn2I TCCGGA 1 cut(s) 886
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
LguI GCTCTTC 2 cut(s) 963, 1296
LmnI GCTCC 4 cut(s) 52, 1067, 1570, 1927
Lsp1109I GCAGC 2 cut(s) 541, 1330
LweI GCATC 8 cut(s) 151, 710, 1193, 1364, 1423, 1498, 1650, 1922
MaeI CTAG 5 cut(s) 689, 1547, 1595, 1779, 1875
MaeII ACGT 5 cut(s) 116, 1036, 1106, 1126, 1857
MaeIII GTNAC 6 cut(s) 194, 466, 673, 1107, 1178, 1598
MalI GATC 6 cut(s) 338, 509, 526, 603, 996, 1253
MbiI CCGCTC 1 cut(s) 89
MboI GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
MflI RGATCY 2 cut(s) 994, 1251
MhlI GDGCHC 3 cut(s) 288, 662, 1308
MlyI GAGTC 1 cut(s) 743
MmeI TCCRAC 5 cut(s) 326, 609, 1146, 1482, 1718
MroI TCCGGA 1 cut(s) 886
MroXI GAANNNNTTC 3 cut(s) 455, 945, 1173
MseI TTAA 4 cut(s) 12, 954, 1269, 1927
MslI CAYNNNNRTG 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 554
MspI CCGG 4 cut(s) 482, 887, 1373, 1850
MspR9I CCNGG 8 cut(s) 192, 365, 483, 590, 811, 1256, 1374, 1851
Mva1269I GAATGC 1 cut(s) 313
MvaI CCWGG 5 cut(s) 192, 365, 590, 811, 1256
MvnI CGCG 3 cut(s) 122, 1278, 1331
NciI CCSGG 3 cut(s) 483, 1374, 1851
NdeI CATATG 1 cut(s) 844
NdeII GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
NlaIII CATG 6 cut(s) 343, 627, 986, 1562, 1846, 1895
NlaIV GGNNCC 7 cut(s) 54, 275, 659, 1063, 1253, 1377, 1742
NmuCI GTSAC 4 cut(s) 194, 466, 1178, 1598
NspI RCATGY 1 cut(s) 986
PaeI GCATGC 1 cut(s) 986
PasI CCCWGGG 1 cut(s) 364
PciSI GCTCTTC 2 cut(s) 963, 1296
PctI GAATGC 1 cut(s) 313
PdmI GAANNNNTTC 3 cut(s) 455, 945, 1173
PfeI GAWTC 6 cut(s) 151, 685, 1009, 1067, 1133, 1846
Pfl23II CGTACG 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 1585
PfoI TCCNGGA 2 cut(s) 481, 1254
PkrI GCNGC 4 cut(s) 556, 700, 1330, 1345
PleI GAGTC 1 cut(s) 743
PmaCI CACGTG 1 cut(s) 1127
PmlI CACGTG 1 cut(s) 1127
PpsI GAGTC 1 cut(s) 743
Ppu21I YACGTR 1 cut(s) 1127
PpuMI RGGWCCY 1 cut(s) 274
PsiI TTATAA 1 cut(s) 1407
Psp5II RGGWCCY 1 cut(s) 274
Psp6I CCWGG 5 cut(s) 190, 363, 588, 809, 1254
PspCI CACGTG 1 cut(s) 1127
PspGI CCWGG 5 cut(s) 190, 363, 588, 809, 1254
PspLI CGTACG 1 cut(s) 117
PspN4I GGNNCC 7 cut(s) 54, 275, 659, 1063, 1253, 1377, 1742
PspPI GGNCC 5 cut(s) 274, 492, 778, 1322, 1376
PspPPI RGGWCCY 1 cut(s) 274
PstI CTGCAG 1 cut(s) 1087
PstNI CAGNNNCTG 1 cut(s) 1343
PsuI RGATCY 2 cut(s) 994, 1251
PvuII CAGCTG 1 cut(s) 554
RsaI GTAC 2 cut(s) 17, 119
RsaNI GTAC 2 cut(s) 16, 118
RseI CAYNNNNRTG 1 cut(s) 306
SapI GCTCTTC 2 cut(s) 963, 1296
SaqAI TTAA 4 cut(s) 12, 954, 1269, 1927
SatI GCNGC 4 cut(s) 555, 699, 1329, 1344
Sau3AI GATC 6 cut(s) 336, 507, 524, 601, 994, 1251
Sau96I GGNCC 5 cut(s) 274, 492, 778, 1322, 1376
SchI GAGTC 1 cut(s) 743
ScrFI CCNGG 8 cut(s) 192, 365, 483, 590, 811, 1256, 1374, 1851
SduI GDGCHC 3 cut(s) 288, 662, 1308
SfaNI GCATC 8 cut(s) 151, 710, 1193, 1364, 1423, 1498, 1650, 1922
SfcI CTRYAG 1 cut(s) 1083
SinI GGWCC 3 cut(s) 274, 492, 778
SmiMI CAYNNNNRTG 1 cut(s) 306
SmlI CTYRAG 1 cut(s) 90
SmoI CTYRAG 1 cut(s) 90
SphI GCATGC 1 cut(s) 986
SsiI CCGC 9 cut(s) 87, 122, 699, 776, 1112, 1298, 1329, 1537, 1716
SspMI CTAG 5 cut(s) 689, 1547, 1595, 1779, 1875
StyD4I CCNGG 8 cut(s) 190, 363, 481, 588, 809, 1254, 1372, 1849
StyI CCWWGG 3 cut(s) 74, 277, 1551
TaaI ACNGT 2 cut(s) 898, 1174
TaiI ACGT 5 cut(s) 119, 1039, 1109, 1129, 1860
TaqI TCGA 8 cut(s) 60, 149, 418, 736, 1021, 1229, 1431, 1470
TaqII GACCGA 1 cut(s) 1812
TatI WGTACW 1 cut(s) 15
TauI GCSGC 2 cut(s) 701, 1331
TfiI GAWTC 6 cut(s) 151, 685, 1009, 1067, 1133, 1846
Tru1I TTAA 4 cut(s) 12, 954, 1269, 1927
Tru9I TTAA 4 cut(s) 12, 954, 1269, 1927
TscAI CASTG 5 cut(s) 181, 993, 1344, 1875, 1888
TseFI GTSAC 4 cut(s) 194, 466, 1178, 1598
TseI GCWGC 2 cut(s) 554, 1343
Tsp45I GTSAC 4 cut(s) 194, 466, 1178, 1598
TspDTI ATGAA 8 cut(s) 78, 236, 374, 464, 948, 1125, 1575, 1801
TspGWI ACGGA 2 cut(s) 124, 857
TspRI CASTG 5 cut(s) 181, 993, 1344, 1875, 1888
Van91I CCANNNNNTGG 1 cut(s) 1585
VneI GTGCAC 1 cut(s) 284
VpaK11BI GGWCC 3 cut(s) 274, 492, 778
XapI RAATTY 3 cut(s) 944, 1231, 1723
XceI RCATGY 1 cut(s) 986
XcmI CCANNNNNNNNNTGG 1 cut(s) 1393
XmnI GAANNNNTTC 3 cut(s) 455, 945, 1173
XspI CTAG 5 cut(s) 689, 1547, 1595, 1779, 1875
ZraI GACGTC 1 cut(s) 1858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.