Rmu_sc0003553.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003553.1
OG0000480
Physical Location & Seq
Forward (+)
8945 .. 13260
4316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003553.1_g000001.1.cds

Sequence Viewer

Length: 1197 bp
atggacgttgatacgagctcgaagaatgaaaaacaaattgaagatatcattgtgattaagagagagaaaaaggaggttgaagagaagtgtgaatcctatgtcaagaaatgggaaattgaaatgtataattttgttgatcagatcaagagcttacaaacagatttgaatgttcaggctgctcttgctatccgatttcatcccaaattcttctcaattgggtctgaattcttctgggttttctcgcattggaggtatcatcatcatgttcctataaatggagcttcaaaattggctttgaaccagaaaaattggactcgttctcccgtcggcgccgtcgcatctctttggctcgcctgcactcggacttgtcccaggtccgagccaccttgcttcattgttgcgccgccgctccagactccagcgccacactgctcggccttagtgccatgttgcccagcctctagccccttgcgacagccctgtgcgacccagccacggccaccgtaccttccgacccatcttctgcatcccccgtcgtcccaggcccctgccggtgcttcgggtttcgccggcgactcccccgctggccgatctccatcactggttcgtgccccctggtctggaaaggggaagtttcactgggactatccgactttctctatctctataattgctccaggggctctgatgattaccggcagttggcgctctctcgaattggacctccttcctccgagggctttcgcggatgatcttggtaatggtggggagttgagttgttgtgaaagaggttgggggtccaaggacgaccctgaaggtgatgacactgatgagggaaggtcgctcctcgttgtgagggagctccctcaaatgattcctccacctcggaagaagcaaaaggttgcggagacctctgctaatgacgacccatctcgtgctccgcctactcaactagctccgcattcttcttcatgtggaggtttgccttcctcaacatctttgagggatattactgctgacgttgctccctcgaggaccattgtacccccaacaagcaccgaacttactggagagtccttagagtccaatggtttggcggcatcagccaatgtcggccccttggcgtcatcgaacccgagatctggtaggcgtcctatgaccgctatggagttctatgatgacctatgctcctcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

398

Amino Acids

43.29

Weight (kDa)

6.38

Isoelectric Point (pI)

57.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1030
AccB1I GGYRCC 1 cut(s) 329
AccBSI CCGCTC 1 cut(s) 409
AccII CGCG 1 cut(s) 746
AciI CCGC 9 cut(s) 404, 407, 582, 746, 905, 941, 959, 1097, 1161
AcoI YGGCCR 2 cut(s) 497, 586
AcsI RAATTY 2 cut(s) 203, 224
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 3 cut(s) 330, 1124, 1150
AfaI GTAC 2 cut(s) 506, 1044
AfiI CCNNNNNNNGG 6 cut(s) 275, 360, 495, 620, 702, 1142
AgsI TTSAA 6 cut(s) 41, 80, 119, 166, 285, 298
AjnI CCWGG 4 cut(s) 371, 540, 614, 676
AluBI AGCT 5 cut(s) 18, 150, 281, 862, 956
AluI AGCT 5 cut(s) 18, 150, 281, 862, 956
Alw21I GWGCWC 3 cut(s) 20, 864, 940
Alw26I GTCTC 1 cut(s) 902
Ama87I CYCGRG 2 cut(s) 1030, 1135
AoxI GGCC 5 cut(s) 435, 497, 543, 586, 1114
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 2 cut(s) 203, 224
AspLEI GCGC 4 cut(s) 332, 403, 424, 708
AspS9I GGNCC 6 cut(s) 375, 544, 721, 798, 1035, 1115
AsuHPI GGTGA 1 cut(s) 830
AvaI CYCGRG 2 cut(s) 1030, 1135
AvaII GGWCC 4 cut(s) 375, 721, 798, 1035
BaeGI GKGCMC 1 cut(s) 613
BaeI ACNNNNGTAYC 2 cut(s) 1026, 1059
BanI GGYRCC 1 cut(s) 329
BanII GRGCYC 3 cut(s) 20, 685, 864
BauI CACGAG 1 cut(s) 933
Bbv12I GWGCWC 3 cut(s) 20, 864, 940
BbvI GCAGC 1 cut(s) 163
BccI CCATC 3 cut(s) 525, 604, 937
BceAI ACGGC 2 cut(s) 317, 512
BciT130I CCWGG 4 cut(s) 373, 542, 616, 678
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 902
BfaI CTAG 3 cut(s) 462, 953, 1195
BfoI RGCGCY 3 cut(s) 333, 425, 709
BglII AGATCT 1 cut(s) 1139
BisI GCNGC 4 cut(s) 177, 404, 407, 1098
BlsI GCNGC 4 cut(s) 178, 405, 408, 1099
Bme1390I CCNGG 4 cut(s) 373, 542, 616, 678
Bme18I GGWCC 4 cut(s) 375, 721, 798, 1035
BmeT110I CYCGRG 2 cut(s) 1030, 1135
BmgT120I GGNCC 6 cut(s) 375, 544, 721, 798, 1035, 1115
BmiI GGNNCC 4 cut(s) 331, 546, 799, 1117
BmrFI CCNGG 4 cut(s) 373, 542, 616, 678
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 3 cut(s) 347, 535, 1109
BmuI ACTGGG 1 cut(s) 649
BpmI CTGGAG 4 cut(s) 395, 402, 660, 1089
BsaBI GATNNNNATC 1 cut(s) 595
BsaHI GRCGYC 3 cut(s) 330, 1124, 1150
BsaI GGTCTC 1 cut(s) 902
BsaJI CCNNGG 9 cut(s) 371, 494, 540, 614, 677, 734, 801, 884, 1119
BsaXI ACNNNNNCTCC 3 cut(s) 304, 334, 1172
Bsc4I CCNNNNNNNGG 6 cut(s) 275, 360, 495, 620, 702, 1142
Bse118I RCCGGY 3 cut(s) 551, 569, 695
Bse1I ACTGG 3 cut(s) 606, 644, 1072
Bse8I GATNNNNATC 1 cut(s) 595
BseBI CCWGG 4 cut(s) 373, 542, 616, 678
BseDI CCNNGG 9 cut(s) 371, 494, 540, 614, 677, 734, 801, 884, 1119
BseGI GGATG 3 cut(s) 196, 526, 754
BseJI GATNNNNATC 1 cut(s) 595
BseLI CCNNNNNNNGG 6 cut(s) 275, 360, 495, 620, 702, 1142
BseNI ACTGG 3 cut(s) 606, 644, 1072
BseRI GAGGAG 2 cut(s) 836, 1180
BseSI GKGCMC 1 cut(s) 613
BseXI GCAGC 1 cut(s) 163
BseYI CCCAGC 2 cut(s) 454, 489
BsgI GTGCAG 1 cut(s) 340
Bsh1236I CGCG 1 cut(s) 746
BshFI GGCC 5 cut(s) 437, 499, 545, 588, 1116
BshNI GGYRCC 1 cut(s) 329
BsiHKAI GWGCWC 3 cut(s) 20, 864, 940
BsiHKCI CYCGRG 2 cut(s) 1030, 1135
BsiSI CCGG 3 cut(s) 552, 570, 696
BslFI GGGAC 3 cut(s) 354, 523, 656
BslI CCNNNNNNNGG 6 cut(s) 275, 360, 495, 620, 702, 1142
BsmAI GTCTC 1 cut(s) 902
BsmFI GGGAC 3 cut(s) 354, 523, 656
BsmI GAATGC 1 cut(s) 961
BsnI GGCC 5 cut(s) 437, 499, 545, 588, 1116
Bso31I GGTCTC 1 cut(s) 902
BsoBI CYCGRG 2 cut(s) 1030, 1135
Bsp1286I GDGCHC 5 cut(s) 20, 613, 685, 864, 940
Bsp143I GATC 5 cut(s) 136, 141, 590, 751, 1139
BspACI CCGC 9 cut(s) 404, 407, 582, 746, 905, 941, 959, 1097, 1161
BspANI GGCC 5 cut(s) 437, 499, 545, 588, 1116
BspFNI CGCG 1 cut(s) 746
BspLI GGNNCC 4 cut(s) 331, 546, 799, 1117
BspT107I GGYRCC 1 cut(s) 329
BspTNI GGTCTC 1 cut(s) 902
BsrBI CCGCTC 1 cut(s) 409
BsrFI RCCGGY 3 cut(s) 551, 569, 695
BsrI ACTGG 3 cut(s) 606, 644, 1072
BssAI RCCGGY 3 cut(s) 551, 569, 695
BssECI CCNNGG 9 cut(s) 371, 494, 540, 614, 677, 734, 801, 884, 1119
BssMI GATC 5 cut(s) 136, 141, 590, 751, 1139
BssNI GRCGYC 3 cut(s) 330, 1124, 1150
BssSI CACGAG 1 cut(s) 933
BssT1I CCWWGG 2 cut(s) 801, 1119
Bst2BI CACGAG 1 cut(s) 933
Bst2UI CCWGG 4 cut(s) 373, 542, 616, 678
Bst4CI ACNGT 1 cut(s) 504
Bst6I CTCTTC 1 cut(s) 75
BstACI GRCGYC 3 cut(s) 330, 1124, 1150
BstC8I GCNNGC 4 cut(s) 351, 355, 571, 586
BstDEI CTNAG 2 cut(s) 439, 1078
BstDSI CCRYGG 1 cut(s) 494
BstF5I GGATG 3 cut(s) 196, 526, 754
BstFNI CGCG 1 cut(s) 746
BstH2I RGCGCY 3 cut(s) 333, 425, 709
BstHHI GCGC 4 cut(s) 332, 403, 424, 708
BstKTI GATC 5 cut(s) 139, 144, 593, 754, 1142
BstMAI GTCTC 1 cut(s) 902
BstMBI GATC 5 cut(s) 136, 141, 590, 751, 1139
BstMWI GCNNNNNNNGC 5 cut(s) 182, 680, 705, 1022, 1103
BstNI CCWGG 4 cut(s) 373, 542, 616, 678
BstSCI CCNGG 4 cut(s) 371, 540, 614, 676
BstSLI GKGCMC 1 cut(s) 613
BstUI CGCG 1 cut(s) 746
BstV1I GCAGC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 1139
BstXI CCANNNNNNTGG 1 cut(s) 1093
BstYI RGATCY 1 cut(s) 1139
BsuRI GGCC 5 cut(s) 437, 499, 545, 588, 1116
BtgI CCRYGG 1 cut(s) 494
BtsCI GGATG 3 cut(s) 196, 526, 754
BtsI GCAGTG 1 cut(s) 427
BtsIMutI CAGTG 4 cut(s) 427, 599, 637, 825
Cac8I GCNNGC 4 cut(s) 351, 355, 571, 586
CfoI GCGC 4 cut(s) 332, 403, 424, 708
Cfr10I RCCGGY 3 cut(s) 551, 569, 695
Cfr13I GGNCC 6 cut(s) 375, 544, 721, 798, 1035, 1115
CseI GACGC 2 cut(s) 1113, 1139
Csp6I GTAC 2 cut(s) 505, 1043
CviAII CATG 3 cut(s) 263, 447, 972
CviQI GTAC 2 cut(s) 505, 1043
DdeI CTNAG 2 cut(s) 439, 1078
DinI GGCGCC 1 cut(s) 331
DpnI GATC 5 cut(s) 138, 143, 592, 753, 1141
DpnII GATC 5 cut(s) 136, 141, 590, 751, 1139
EaeI YGGCCR 2 cut(s) 497, 586
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
EciI GGCGGA 1 cut(s) 930
Ecl136II GAGCTC 2 cut(s) 18, 862
Eco130I CCWWGG 2 cut(s) 801, 1119
Eco24I GRGCYC 3 cut(s) 20, 685, 864
Eco31I GGTCTC 1 cut(s) 902
Eco32I GATATC 1 cut(s) 46
Eco47I GGWCC 4 cut(s) 375, 721, 798, 1035
Eco53kI GAGCTC 2 cut(s) 18, 862
Eco57I CTGAAG 1 cut(s) 834
Eco88I CYCGRG 2 cut(s) 1030, 1135
EcoICRI GAGCTC 2 cut(s) 18, 862
EcoO109I RGGNCCY 1 cut(s) 544
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 4 cut(s) 371, 540, 614, 676
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 2 cut(s) 801, 1119
EcoT38I GRGCYC 3 cut(s) 20, 685, 864
EgeI GGCGCC 1 cut(s) 331
EheI GGCGCC 1 cut(s) 331
ErhI CCWWGG 2 cut(s) 801, 1119
FaeI CATG 3 cut(s) 266, 450, 975
FaqI GGGAC 3 cut(s) 354, 523, 656
FatI CATG 3 cut(s) 262, 446, 971
FauI CCCGC 1 cut(s) 589
FbaI TGATCA 1 cut(s) 136
Fnu4HI GCNGC 4 cut(s) 177, 404, 407, 1098
FokI GGATG 3 cut(s) 183, 513, 761
FriOI GRGCYC 3 cut(s) 20, 685, 864
Fsp4HI GCNGC 4 cut(s) 177, 404, 407, 1098
FspBI CTAG 3 cut(s) 462, 953, 1195
GlaI GCGC 4 cut(s) 331, 402, 423, 707
GluI GCNGC 4 cut(s) 177, 404, 407, 1098
GsaI CCCAGC 2 cut(s) 458, 493
GsuI CTGGAG 4 cut(s) 395, 402, 660, 1089
HaeII RGCGCY 3 cut(s) 333, 425, 709
HaeIII GGCC 5 cut(s) 437, 499, 545, 588, 1116
HapII CCGG 3 cut(s) 552, 570, 696
HgaI GACGC 2 cut(s) 1113, 1139
HhaI GCGC 4 cut(s) 332, 403, 424, 708
Hin1I GRCGYC 3 cut(s) 330, 1124, 1150
Hin1II CATG 3 cut(s) 266, 450, 975
Hin6I GCGC 4 cut(s) 330, 401, 422, 706
HinP1I GCGC 4 cut(s) 330, 401, 422, 706
HinfI GANTC 7 cut(s) 92, 313, 415, 575, 874, 1073, 1082
HpaII CCGG 3 cut(s) 552, 570, 696
HphI GGTGA 1 cut(s) 830
Hpy188III TCNNGA 5 cut(s) 103, 145, 412, 621, 713
Hpy99I CGWCG 3 cut(s) 329, 338, 538
HpyAV CCTTC 5 cut(s) 518, 737, 809, 831, 996
HpyCH4III ACNGT 1 cut(s) 504
HpyCH4IV ACGT 2 cut(s) 6, 1020
HpyCH4V TGCA 2 cut(s) 357, 526
HpyF10VI GCNNNNNNNGC 5 cut(s) 182, 680, 705, 1022, 1103
HpyF3I CTNAG 2 cut(s) 439, 1078
HpySE526I ACGT 2 cut(s) 6, 1020
Hsp92I GRCGYC 3 cut(s) 330, 1124, 1150
Hsp92II CATG 3 cut(s) 266, 450, 975
HspAI GCGC 4 cut(s) 330, 401, 422, 706
KasI GGCGCC 1 cut(s) 329
KroI GCCGGC 1 cut(s) 569
KroNI GCCGGC 1 cut(s) 571
Ksp22I TGATCA 1 cut(s) 136
Kzo9I GATC 5 cut(s) 136, 141, 590, 751, 1139
Lsp1109I GCAGC 1 cut(s) 163
LweI GCATC 3 cut(s) 347, 535, 1109
MaeI CTAG 3 cut(s) 462, 953, 1195
MaeII ACGT 2 cut(s) 6, 1020
MalI GATC 5 cut(s) 138, 143, 592, 753, 1141
MbiI CCGCTC 1 cut(s) 409
MboI GATC 5 cut(s) 136, 141, 590, 751, 1139
MboII GAAGA 9 cut(s) 34, 53, 92, 199, 220, 512, 901, 957, 960
MfeI CAATTG 1 cut(s) 213
MflI RGATCY 1 cut(s) 1139
MhlI GDGCHC 5 cut(s) 20, 613, 685, 864, 940
Mly113I GGCGCC 1 cut(s) 330
MlyI GAGTC 5 cut(s) 307, 409, 569, 1082, 1091
MmeI TCCRAC 2 cut(s) 536, 674
MreI CGCCGGCG 1 cut(s) 569
MroNI GCCGGC 1 cut(s) 569
MseI TTAA 1 cut(s) 57
MslI CAYNNNNRTG 1 cut(s) 261
MspA1I CMGCKG 1 cut(s) 584
MspI CCGG 3 cut(s) 552, 570, 696
MspR9I CCNGG 4 cut(s) 373, 542, 616, 678
MunI CAATTG 1 cut(s) 213
Mva1269I GAATGC 1 cut(s) 961
MvaI CCWGG 4 cut(s) 373, 542, 616, 678
MvnI CGCG 1 cut(s) 746
MwoI GCNNNNNNNGC 5 cut(s) 182, 680, 705, 1022, 1103
NaeI GCCGGC 1 cut(s) 571
NarI GGCGCC 1 cut(s) 330
NdeII GATC 5 cut(s) 136, 141, 590, 751, 1139
NgoMIV GCCGGC 1 cut(s) 569
NlaIII CATG 3 cut(s) 266, 450, 975
NlaIV GGNNCC 4 cut(s) 331, 546, 799, 1117
NmeAIII GCCGAG 1 cut(s) 413
PaeR7I CTCGAG 1 cut(s) 1030
PctI GAATGC 1 cut(s) 961
PdiI GCCGGC 1 cut(s) 571
PfeI GAWTC 2 cut(s) 92, 874
PkrI GCNGC 4 cut(s) 178, 405, 408, 1099
PleI GAGTC 5 cut(s) 307, 409, 569, 1081, 1090
PluTI GGCGCC 1 cut(s) 333
PpsI GAGTC 5 cut(s) 307, 409, 569, 1081, 1090
Psp124BI GAGCTC 2 cut(s) 20, 864
Psp6I CCWGG 4 cut(s) 371, 540, 614, 676
PspFI CCCAGC 2 cut(s) 454, 489
PspGI CCWGG 4 cut(s) 371, 540, 614, 676
PspN4I GGNNCC 4 cut(s) 331, 546, 799, 1117
PspPI GGNCC 6 cut(s) 375, 544, 721, 798, 1035, 1115
PspXI VCTCGAGB 1 cut(s) 1030
PsuI RGATCY 1 cut(s) 1139
RsaI GTAC 2 cut(s) 506, 1044
RsaNI GTAC 2 cut(s) 505, 1043
RseI CAYNNNNRTG 1 cut(s) 261
SacI GAGCTC 2 cut(s) 20, 864
SaqAI TTAA 1 cut(s) 57
SatI GCNGC 4 cut(s) 177, 404, 407, 1098
Sau3AI GATC 5 cut(s) 136, 141, 590, 751, 1139
Sau96I GGNCC 6 cut(s) 375, 544, 721, 798, 1035, 1115
SchI GAGTC 5 cut(s) 307, 409, 569, 1082, 1091
ScrFI CCNGG 4 cut(s) 373, 542, 616, 678
SduI GDGCHC 5 cut(s) 20, 613, 685, 864, 940
SfaNI GCATC 3 cut(s) 347, 535, 1109
SfoI GGCGCC 1 cut(s) 331
Sfr274I CTCGAG 1 cut(s) 1030
SgrAI CRCCGGYG 1 cut(s) 569
SinI GGWCC 4 cut(s) 375, 721, 798, 1035
SlaI CTCGAG 1 cut(s) 1030
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 1 cut(s) 1030
SmoI CTYRAG 1 cut(s) 1030
SsiI CCGC 9 cut(s) 404, 407, 582, 746, 905, 941, 959, 1097, 1161
SspDI GGCGCC 1 cut(s) 329
SspMI CTAG 3 cut(s) 462, 953, 1195
SstI GAGCTC 2 cut(s) 20, 864
StyD4I CCNGG 4 cut(s) 371, 540, 614, 676
StyI CCWWGG 2 cut(s) 801, 1119
TaaI ACNGT 1 cut(s) 504
TaiI ACGT 2 cut(s) 9, 1023
TaqI TCGA 4 cut(s) 20, 714, 1031, 1130
TauI GCSGC 3 cut(s) 406, 409, 1100
TfiI GAWTC 2 cut(s) 92, 874
Tru1I TTAA 1 cut(s) 57
Tru9I TTAA 1 cut(s) 57
TscAI CASTG 4 cut(s) 434, 606, 644, 832
TseI GCWGC 1 cut(s) 176
TspDTI ATGAA 4 cut(s) 42, 185, 382, 960
TspRI CASTG 4 cut(s) 434, 606, 644, 832
VpaK11BI GGWCC 4 cut(s) 375, 721, 798, 1035
XapI RAATTY 2 cut(s) 203, 224
XhoI CTCGAG 1 cut(s) 1030
XspI CTAG 3 cut(s) 462, 953, 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.