Rmu_sc0001744.1_g000019

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001744.1
OG0000480
Physical Location & Seq
Forward (+)
87396 .. 92460
5065 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001744.1_g000019.1.cds

Sequence Viewer

Length: 2058 bp
atgctcgtccctaccaggaccttcctcaacccggtttcgtgccccgttcttgtacgaccaagctccagcccgatccgacgcacacccagcttggccccacccgcggctagttctccacctccgcctcccgacgtcacctggaagccgctcggtttctcgccgacagccttcaaccctactgccttcaaccctattgccctaggcccgcgtggcaatcgagtcgtcgctccagctactacccggcccaggttccagccccatgtagcacggcttcggctttggctcggacaatctggcctccgagcagcaaatccggccacttcccggcacccgttggcctttgtcaccgatccgcgttccctagctcagacccgacctggttcttccccttgtaccctcatggctcgaatcaaaactactggcttaacgaagagtcaaaggacaaacgcagagtcaactactgaacctacaccctggcaaccggaaaaccatatcctggagacatatgccgaggtgttctccatgccgcctctagttaagatttcggcggtccctgcagatgcggacatctacactggtagaaacatccccgaatgtgccctgatactggctcccgagcagctgcgccgcccctcgactttggtcggcctttatcaaagccgcgtaggtggtgcaacgtcaggaacagcctttgcgttcttcgttgcgaaaatggaaggctgcttttaccggtccgacctcaaggggcccttcaccccatcgggtccgacctcttccttgcaaccgcctcctcccactgctctggaattgaaatttaagaagcgtgataactctttcatcatagccggaaagtccttagactccaatggtttggctgcgtcagccatctccggtgccttggcgtcatcgaacccgagatcggttaggcttcccaagagcgctatggagttctatgacgacctatgctcctctcagctcgatgccctcatggcgtctcatcgttttttgcgcagtctcggcgctcttcattccaggcagcaacaacgccttgagaaggctgaccaagagctgaaatccaaggagaaggaactaaacgaccaaatggagtcaatgacgcagctgagcctcatcctcgaggaccgaaatcgcgaggtagcaaagttgaaaaatgatttggctttggccttgactaaggaaaatgatagatgctacgtagggcccgatgaattcgatcgcctttatgggtttgcccccagggactattctcctattcgtggtatgctaccagggatgctccttcatcggcgtcgagtgcttccgaggggcctggcgatgagacgaaatgtgttgaactacctcgacgatggtcaggcgagtgttcctcgtgccccgaaggctcgtgccggtcctaatcgccctcatcatcggagcatgagtactgacaggggtataagtcctgtatctcatcgcctccgtactctgagagaggaatccttcatgccacaggattcgctcgagcatgccttgtcggaggctagcaatctgaaggcggagggtgcctcaacgtcggtgttcatttcgacaagggtgcctcgacatcagcgtctatttcgacaaggtgcctcgacgtcggcgtttatttcgacaagggtgcctcgacgtctgcgtttatttagacaagggtgcctcgacgtcggagttcatttcaacaagggtgcctcgacatcggcgtttatttctacaagggtgcctcgacattggctttatttcgaccaaggtgcctcgacgtcggcgtccattttgacaagggtgcctcgacatcttgcacatgtaaaattcgtcacgccatcccacccccgcccgcaacgggggtgtggtccattttcccaccctcgcccacgactagggatgaggcacgccatcccacccccgcccgcagcgagggtgtggtccatcatcccacccccgccctcggcgacggatgaggcacgccatcccacccccgcccacagcgagggtgtggtccatcatcccacccctgccctcgacaaggggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

685

Amino Acids

75.26

Weight (kDa)

10.67

Isoelectric Point (pI)

55.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1602, 1792
AatII GACGTC 5 cut(s) 135, 1631, 1663, 1695, 1790
AbsI CCTCGAGG 1 cut(s) 1133
Acc16I TGCGCA 1 cut(s) 1010
AccB7I CCANNNNNTGG 1 cut(s) 496
AccBSI CCGCTC 1 cut(s) 148
AccII CGCG 5 cut(s) 104, 208, 355, 663, 1149
AclWI GGATC 2 cut(s) 67, 344
AcoI YGGCCR 1 cut(s) 315
AcsI RAATTY 3 cut(s) 812, 1226, 1835
AcuI CTGAAG 1 cut(s) 1565
AcyI GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
AfaI GTAC 4 cut(s) 54, 394, 1438, 1477
AfeI AGCGCT 1 cut(s) 940
AflIII ACRYGT 1 cut(s) 1828
AgeI ACCGGT 1 cut(s) 729
AgsI TTSAA 6 cut(s) 172, 187, 811, 1165, 1351, 1708
AjuI GAANNNNNNNTTGG 2 cut(s) 1157, 1189
AluBI AGCT 8 cut(s) 63, 90, 233, 365, 622, 976, 1069, 1120
AluI AGCT 8 cut(s) 63, 90, 233, 365, 622, 976, 1069, 1120
Alw26I GTCTC 4 cut(s) 494, 999, 1019, 1330
AlwI GGATC 2 cut(s) 67, 344
Ama87I CYCGRG 4 cut(s) 614, 913, 1133, 1514
Aor51HI AGCGCT 1 cut(s) 940
ApaI GGGCCC 2 cut(s) 750, 1221
ApeKI GCWGC 8 cut(s) 305, 619, 622, 720, 875, 1036, 1117, 1937
ApoI RAATTY 3 cut(s) 812, 1226, 1835
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
AsiGI ACCGGT 1 cut(s) 729
AspA2I CCTAGG 1 cut(s) 199
AspLEI GCGC 4 cut(s) 627, 941, 1011, 1022
AsuC2I CCSGG 3 cut(s) 32, 241, 325
AsuHPI GGTGA 3 cut(s) 127, 337, 745
AsuNHI GCTAGC 1 cut(s) 1535
AvaI CYCGRG 4 cut(s) 614, 913, 1133, 1514
AvaII GGWCC 9 cut(s) 18, 550, 732, 764, 1138, 1406, 1877, 1950, 2023
AvrII CCTAGG 1 cut(s) 199
BaeGI GKGCMC 5 cut(s) 44, 601, 750, 1221, 1390
BanII GRGCYC 2 cut(s) 750, 1221
BarI GAAGNNNNNNTAC 2 cut(s) 255, 287
BauI CACGAG 2 cut(s) 1383, 1398
BbvI GCAGC 8 cut(s) 317, 609, 631, 707, 862, 1048, 1129, 1949
BccI CCATC 8 cut(s) 766, 893, 1358, 1855, 1928, 1961, 2001, 2034
BceAI ACGGC 1 cut(s) 284
BcgI CGANNNNNNTGC 8 cut(s) 202, 236, 1570, 1604, 1633, 1667, 1760, 1794
BcnI CCSGG 3 cut(s) 32, 241, 325
BcoDI GTCTC 4 cut(s) 494, 999, 1019, 1330
BfaI CTAG 6 cut(s) 108, 200, 362, 533, 1536, 1904
BfmI CTRYAG 1 cut(s) 555
BfoI RGCGCY 2 cut(s) 942, 1023
BglI GCCNNNNNGGC 3 cut(s) 210, 989, 1394
BlnI CCTAGG 1 cut(s) 199
BlpI GCTNAGC 1 cut(s) 1121
BmcAI AGTACT 1 cut(s) 1438
Bme18I GGWCC 9 cut(s) 18, 550, 732, 764, 1138, 1406, 1877, 1950, 2023
BmeT110I CYCGRG 4 cut(s) 614, 913, 1133, 1514
BmsI GCATC 4 cut(s) 550, 970, 1196, 1281
BmtI GCTAGC 1 cut(s) 1539
BoxI GACNNNNGTC 2 cut(s) 641, 1365
BplI GAGNNNNNCTC 6 cut(s) 503, 535, 1366, 1398, 1544, 1576
BpmI CTGGAG 3 cut(s) 49, 213, 518
Bpu1102I GCTNAGC 1 cut(s) 1121
BpuEI CTTGAG 2 cut(s) 725, 1070
BpuMI CCSGG 3 cut(s) 32, 241, 325
BsaAI YACGTR 1 cut(s) 1213
BsaHI GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
BsaWI WCCGGW 3 cut(s) 481, 729, 890
BsaXI ACNNNNNCTCC 4 cut(s) 950, 980, 1420, 1450
Bse118I RCCGGY 2 cut(s) 729, 1403
Bse1I ACTGG 3 cut(s) 424, 580, 612
BseMII CTCAG 4 cut(s) 380, 986, 1112, 1472
BseNI ACTGG 3 cut(s) 424, 580, 612
BseRI GAGGAG 2 cut(s) 780, 958
BseSI GKGCMC 5 cut(s) 44, 601, 750, 1221, 1390
BseXI GCAGC 8 cut(s) 317, 609, 631, 707, 862, 1048, 1129, 1949
BseYI CCCAGC 1 cut(s) 86
Bsh1236I CGCG 5 cut(s) 104, 208, 355, 663, 1149
Bsh1285I CGRYCG 1 cut(s) 1234
BshTI ACCGGT 1 cut(s) 729
BsiEI CGRYCG 1 cut(s) 1234
BsiHKCI CYCGRG 4 cut(s) 614, 913, 1133, 1514
BsiSI CCGG 9 cut(s) 32, 241, 314, 325, 482, 730, 846, 891, 1404
BslFI GGGAC 2 cut(s) 536, 1271
BsmAI GTCTC 4 cut(s) 494, 999, 1019, 1330
BsmBI CGTCTC 2 cut(s) 999, 1330
BsmFI GGGAC 2 cut(s) 536, 1271
BsoBI CYCGRG 4 cut(s) 614, 913, 1133, 1514
Bsp120I GGGCCC 2 cut(s) 746, 1217
Bsp1286I GDGCHC 5 cut(s) 44, 601, 750, 1221, 1390
Bsp143I GATC 4 cut(s) 72, 349, 917, 1231
Bsp1720I GCTNAGC 1 cut(s) 1121
Bsp68I TCGCGA 1 cut(s) 1149
BspCNI CTCAG 4 cut(s) 379, 985, 1113, 1473
BspFNI CGCG 5 cut(s) 104, 208, 355, 663, 1149
BspMAI CTGCAG 1 cut(s) 559
BspOI GCTAGC 1 cut(s) 1539
BspPI GGATC 2 cut(s) 67, 344
BspQI GCTCTTC 1 cut(s) 1029
BsrBI CCGCTC 1 cut(s) 148
BsrFI RCCGGY 2 cut(s) 729, 1403
BsrI ACTGG 3 cut(s) 424, 580, 612
BssAI RCCGGY 2 cut(s) 729, 1403
BssMI GATC 4 cut(s) 72, 349, 917, 1231
BssNI GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
BssSI CACGAG 2 cut(s) 1383, 1398
BssT1I CCWWGG 4 cut(s) 199, 897, 1077, 1774
Bst2BI CACGAG 2 cut(s) 1383, 1398
Bst6I CTCTTC 3 cut(s) 425, 778, 1029
BstACI GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
BstBAI YACGTR 1 cut(s) 1213
BstC8I GCNNGC 7 cut(s) 206, 1521, 1537, 1862, 1917, 1935, 1990
BstDEI CTNAG 6 cut(s) 366, 856, 972, 1121, 1191, 1481
BstDSI CCRYGG 1 cut(s) 102
BstENI CCTNNNNNAGG 2 cut(s) 1052, 2048
BstFNI CGCG 5 cut(s) 104, 208, 355, 663, 1149
BstH2I RGCGCY 2 cut(s) 942, 1023
BstHHI GCGC 4 cut(s) 627, 941, 1011, 1022
BstKTI GATC 4 cut(s) 75, 352, 920, 1234
BstMAI GTCTC 4 cut(s) 494, 999, 1019, 1330
BstMBI GATC 4 cut(s) 72, 349, 917, 1231
BstMCI CGRYCG 1 cut(s) 1234
BstNSI RCATGY 2 cut(s) 1523, 1832
BstPAI GACNNNNGTC 2 cut(s) 641, 1365
BstSFI CTRYAG 1 cut(s) 555
BstSLI GKGCMC 5 cut(s) 44, 601, 750, 1221, 1390
BstSNI TACGTA 1 cut(s) 1213
BstUI CGCG 5 cut(s) 104, 208, 355, 663, 1149
BstV1I GCAGC 8 cut(s) 317, 609, 631, 707, 862, 1048, 1129, 1949
BstXI CCANNNNNNTGG 2 cut(s) 802, 871
BtgI CCRYGG 1 cut(s) 102
BtgZI GCGATG 2 cut(s) 1346, 1451
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 2 cut(s) 573, 795
BtuMI TCGCGA 1 cut(s) 1149
Cac8I GCNNGC 7 cut(s) 206, 1521, 1537, 1862, 1917, 1935, 1990
CfoI GCGC 4 cut(s) 627, 941, 1011, 1022
Cfr10I RCCGGY 2 cut(s) 729, 1403
Cfr42I CCGCGG 1 cut(s) 105
CpoI CGGWCCG 1 cut(s) 732
CseI GACGC 8 cut(s) 87, 867, 891, 981, 1123, 1295, 1592, 1782
CsiI ACCWGGT 1 cut(s) 376
Csp6I GTAC 4 cut(s) 53, 393, 1437, 1476
CspAI ACCGGT 1 cut(s) 729
CspI CGGWCCG 1 cut(s) 732
CviAII CATG 8 cut(s) 260, 400, 523, 988, 1432, 1498, 1520, 1829
CviQI GTAC 4 cut(s) 53, 393, 1437, 1476
DdeI CTNAG 6 cut(s) 366, 856, 972, 1121, 1191, 1481
DpnI GATC 4 cut(s) 74, 351, 919, 1233
DpnII GATC 4 cut(s) 72, 349, 917, 1231
DrdI GACNNNNNNGTC 2 cut(s) 1602, 1792
DseDI GACNNNNNNGTC 2 cut(s) 1602, 1792
EaeI YGGCCR 1 cut(s) 315
Eam1104I CTCTTC 3 cut(s) 425, 778, 1029
EarI CTCTTC 3 cut(s) 425, 778, 1029
EciI GGCGGA 2 cut(s) 111, 1565
Eco105I TACGTA 1 cut(s) 1213
Eco130I CCWWGG 4 cut(s) 199, 897, 1077, 1774
Eco24I GRGCYC 2 cut(s) 750, 1221
Eco47I GGWCC 9 cut(s) 18, 550, 732, 764, 1138, 1406, 1877, 1950, 2023
Eco47III AGCGCT 1 cut(s) 940
Eco57I CTGAAG 1 cut(s) 1565
Eco88I CYCGRG 4 cut(s) 614, 913, 1133, 1514
EcoNI CCTNNNNNAGG 2 cut(s) 1052, 2048
EcoO109I RGGNCCY 5 cut(s) 18, 746, 747, 1217, 1324
EcoRI GAATTC 1 cut(s) 1226
EcoT14I CCWWGG 4 cut(s) 199, 897, 1077, 1774
EcoT38I GRGCYC 2 cut(s) 750, 1221
ErhI CCWWGG 4 cut(s) 199, 897, 1077, 1774
Esp3I CGTCTC 2 cut(s) 999, 1330
FaeI CATG 8 cut(s) 263, 403, 526, 991, 1435, 1501, 1523, 1832
FalI AAGNNNNNCTT 2 cut(s) 734, 766
FaqI GGGAC 2 cut(s) 536, 1271
FatI CATG 8 cut(s) 259, 399, 522, 987, 1431, 1497, 1519, 1828
FauI CCCGC 8 cut(s) 109, 213, 1865, 1869, 1938, 1942, 1974, 2011
FauNDI CATATG 1 cut(s) 505
FriOI GRGCYC 2 cut(s) 750, 1221
FspBI CTAG 6 cut(s) 108, 200, 362, 533, 1536, 1904
FspI TGCGCA 1 cut(s) 1010
GlaI GCGC 4 cut(s) 626, 940, 1010, 1021
GsaI CCCAGC 1 cut(s) 90
GsuI CTGGAG 3 cut(s) 49, 213, 518
HaeII RGCGCY 2 cut(s) 942, 1023
HapII CCGG 9 cut(s) 32, 241, 314, 325, 482, 730, 846, 891, 1404
HgaI GACGC 8 cut(s) 87, 867, 891, 981, 1123, 1295, 1592, 1782
HhaI GCGC 4 cut(s) 627, 941, 1011, 1022
Hin1I GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
Hin1II CATG 8 cut(s) 263, 403, 526, 991, 1435, 1501, 1523, 1832
Hin6I GCGC 4 cut(s) 625, 939, 1009, 1020
HinP1I GCGC 4 cut(s) 625, 939, 1009, 1020
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HinfI GANTC 8 cut(s) 219, 408, 433, 452, 860, 1106, 1490, 1508
HpaII CCGG 9 cut(s) 32, 241, 314, 325, 482, 730, 846, 891, 1404
HphI GGTGA 3 cut(s) 127, 337, 745
Hpy166II GTNNAC 1 cut(s) 456
Hpy188III TCNNGA 5 cut(s) 128, 614, 681, 803, 1148
Hpy8I GTNNAC 1 cut(s) 456
HpyCH4IV ACGT 8 cut(s) 132, 677, 1212, 1565, 1628, 1660, 1692, 1787
HpyCH4V TGCA 4 cut(s) 557, 674, 781, 1826
HpyF3I CTNAG 6 cut(s) 366, 856, 972, 1121, 1191, 1481
HpySE526I ACGT 8 cut(s) 132, 677, 1212, 1565, 1628, 1660, 1692, 1787
Hsp92I GRCGYC 9 cut(s) 132, 902, 992, 1306, 1628, 1660, 1692, 1787, 1793
Hsp92II CATG 8 cut(s) 263, 403, 526, 991, 1435, 1501, 1523, 1832
HspAI GCGC 4 cut(s) 625, 939, 1009, 1020
KspI CCGCGG 1 cut(s) 105
Kzo9I GATC 4 cut(s) 72, 349, 917, 1231
LguI GCTCTTC 1 cut(s) 1029
LmnI GCTCC 6 cut(s) 68, 232, 616, 971, 1299, 1428
Lsp1109I GCAGC 8 cut(s) 317, 609, 631, 707, 862, 1048, 1129, 1949
LweI GCATC 4 cut(s) 550, 970, 1196, 1281
MabI ACCWGGT 1 cut(s) 376
MaeI CTAG 6 cut(s) 108, 200, 362, 533, 1536, 1904
MaeII ACGT 8 cut(s) 132, 677, 1212, 1565, 1628, 1660, 1692, 1787
MaeIII GTNAC 3 cut(s) 133, 343, 1840
MalI GATC 4 cut(s) 74, 351, 919, 1233
MbiI CCGCTC 1 cut(s) 148
MboI GATC 4 cut(s) 72, 349, 917, 1231
MboII GAAGA 5 cut(s) 375, 442, 691, 765, 1016
MhlI GDGCHC 5 cut(s) 44, 601, 750, 1221, 1390
MluCI AATT 4 cut(s) 806, 812, 1226, 1835
MlyI GAGTC 5 cut(s) 228, 442, 461, 854, 1115
MmeI TCCRAC 5 cut(s) 100, 759, 791, 1509, 1675
MseI TTAA 3 cut(s) 425, 537, 816
MspA1I CMGCKG 3 cut(s) 104, 622, 1120
MspI CCGG 9 cut(s) 32, 241, 314, 325, 482, 730, 846, 891, 1404
MvnI CGCG 5 cut(s) 104, 208, 355, 663, 1149
NciI CCSGG 3 cut(s) 32, 241, 325
NdeI CATATG 1 cut(s) 505
NdeII GATC 4 cut(s) 72, 349, 917, 1231
NheI GCTAGC 1 cut(s) 1535
NlaIII CATG 8 cut(s) 263, 403, 526, 991, 1435, 1501, 1523, 1832
NmeAIII GCCGAG 3 cut(s) 535, 996, 1952
NmuCI GTSAC 3 cut(s) 133, 343, 1840
NruI TCGCGA 1 cut(s) 1149
NsbI TGCGCA 1 cut(s) 1010
NspI RCATGY 2 cut(s) 1523, 1832
PaeI GCATGC 1 cut(s) 1523
PaeR7I CTCGAG 2 cut(s) 1133, 1514
PasI CCCWGGG 1 cut(s) 1254
PciI ACATGT 1 cut(s) 1828
PciSI GCTCTTC 1 cut(s) 1029
PcsI WCGNNNNNNNCGW 6 cut(s) 1218, 1600, 1631, 1663, 1727, 1790
PfeI GAWTC 3 cut(s) 408, 1490, 1508
PflMI CCANNNNNTGG 1 cut(s) 496
PfoI TCCNGGA 1 cut(s) 495
PinAI ACCGGT 1 cut(s) 729
Ple19I CGATCG 1 cut(s) 1234
PleI GAGTC 5 cut(s) 227, 441, 460, 854, 1114
PpsI GAGTC 5 cut(s) 227, 441, 460, 854, 1114
Ppu21I YACGTR 1 cut(s) 1213
PpuMI RGGWCCY 1 cut(s) 18
PscI ACATGT 1 cut(s) 1828
PshAI GACNNNNGTC 2 cut(s) 641, 1365
Psp5II RGGWCCY 1 cut(s) 18
PspFI CCCAGC 1 cut(s) 86
PspOMI GGGCCC 2 cut(s) 746, 1217
PspPPI RGGWCCY 1 cut(s) 18
PspXI VCTCGAGB 2 cut(s) 1133, 1514
PstI CTGCAG 1 cut(s) 559
PvuI CGATCG 1 cut(s) 1234
PvuII CAGCTG 2 cut(s) 622, 1120
RruI TCGCGA 1 cut(s) 1149
RsaI GTAC 4 cut(s) 54, 394, 1438, 1477
RsaNI GTAC 4 cut(s) 53, 393, 1437, 1476
Rsr2I CGGWCCG 1 cut(s) 732
RsrII CGGWCCG 1 cut(s) 732
SacII CCGCGG 1 cut(s) 105
SapI GCTCTTC 1 cut(s) 1029
SaqAI TTAA 3 cut(s) 425, 537, 816
Sau3AI GATC 4 cut(s) 72, 349, 917, 1231
ScaI AGTACT 1 cut(s) 1438
SchI GAGTC 5 cut(s) 228, 442, 461, 854, 1115
SduI GDGCHC 5 cut(s) 44, 601, 750, 1221, 1390
SexAI ACCWGGT 1 cut(s) 376
SfaNI GCATC 4 cut(s) 550, 970, 1196, 1281
SfcI CTRYAG 1 cut(s) 555
Sfr274I CTCGAG 2 cut(s) 1133, 1514
Sfr303I CCGCGG 1 cut(s) 105
SgrBI CCGCGG 1 cut(s) 105
SinI GGWCC 9 cut(s) 18, 550, 732, 764, 1138, 1406, 1877, 1950, 2023
SlaI CTCGAG 2 cut(s) 1133, 1514
SmlI CTYRAG 4 cut(s) 740, 1049, 1133, 1514
SmoI CTYRAG 4 cut(s) 740, 1049, 1133, 1514
SnaBI TACGTA 1 cut(s) 1213
SphI GCATGC 1 cut(s) 1523
Sse9I AATT 4 cut(s) 806, 812, 1226, 1835
SspMI CTAG 6 cut(s) 108, 200, 362, 533, 1536, 1904
StyI CCWWGG 4 cut(s) 199, 897, 1077, 1774
TaiI ACGT 8 cut(s) 135, 680, 1215, 1568, 1631, 1663, 1695, 1790
TaqII GACCGA 1 cut(s) 1155
TasI AATT 4 cut(s) 806, 812, 1226, 1835
TatI WGTACW 1 cut(s) 1436
TauI GCSGC 5 cut(s) 107, 148, 529, 630, 663
TfiI GAWTC 3 cut(s) 408, 1490, 1508
Tru1I TTAA 3 cut(s) 425, 537, 816
Tru9I TTAA 3 cut(s) 425, 537, 816
TscAI CASTG 2 cut(s) 580, 802
TseFI GTSAC 3 cut(s) 133, 343, 1840
TseI GCWGC 8 cut(s) 305, 619, 622, 720, 875, 1036, 1117, 1937
Tsp45I GTSAC 3 cut(s) 133, 343, 1840
TspDTI ATGAA 7 cut(s) 826, 1016, 1239, 1289, 1486, 1564, 1691
TspGWI ACGGA 2 cut(s) 1463, 1994
TspRI CASTG 2 cut(s) 580, 802
Van91I CCANNNNNTGG 1 cut(s) 496
VpaK11BI GGWCC 9 cut(s) 18, 550, 732, 764, 1138, 1406, 1877, 1950, 2023
XagI CCTNNNNNAGG 2 cut(s) 1052, 2048
XapI RAATTY 3 cut(s) 812, 1226, 1835
XceI RCATGY 2 cut(s) 1523, 1832
XcmI CCANNNNNNNNNTGG 1 cut(s) 940
XhoI CTCGAG 2 cut(s) 1133, 1514
XmaJI CCTAGG 1 cut(s) 199
XspI CTAG 6 cut(s) 108, 200, 362, 533, 1536, 1904
ZraI GACGTC 5 cut(s) 133, 1629, 1661, 1693, 1788
ZrmI AGTACT 1 cut(s) 1438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.