Rmu_sc0000419.1_g000026

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000419.1
OG0000480
Physical Location & Seq
Forward (+)
141503 .. 143548
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000419.1_g000026.1.cds

Sequence Viewer

Length: 1884 bp
atggctcgcatcaaatttactgattcgagcttacctcataaagggagctcagagtcaagtggtgaacccacgccttggcaaccgacgcattcaattattgagaaatgcgctgaagcatattctatcccaaaatcggtcaaactttcagccattcctgcggacgcagatatctacacgggtaggaatattcccgacgatgccttgatcttgtctcctaagcacttacgctatgtcaggttccctattcaccctgtttttcagcttatgtgggccgtgcttggtctgcatccatttcaacttaatccgaactcctacctcatattatctgcctttttgatcgtgggtttgaagtgggaagtttccctgggattgtctgatttcctctatctctacaattgcgccaagctaagcaaatattttcggtatttcaatttcacaccttttccgaagatgaaggtattcgcaaggttttccactcgtgacagtgattggaaatctagggctttgatgatctctggcgattggcgatctcttgagctggacttgcttcctccgagggccttcgcgaatgaccttgcttataagatttctcaagcgaagttcaaccttccccctaatcgcgtgcattggctagagactcatcttgtcgggcagggatggtatccctctcagttcgcaaccctcgagaattgtcttgacatggcgtccaatcgtccttcggctttgtttgaccgctctcgaacgcatgtgaattggtttcttttaggaaaaatgttatcgctccaggttgcgcgcatggagagccatttctatatatcggagcgttgcgaatctctgttctcagaatatcttgctattaaggacacattcaaaactgtcacccctggttcggggtttgtggtagctggggatgacgacgtggacgaagggtcagaggaaagggacgatgggttcaatggcaacaaggcagaggagagagtgccttcccacgccgtgagggagttacctcaaataatcccccctcctcggaaattgaggaagcggaaagctgaaaatgctcctgacagcgatggtccctcacattcctcgcatactccctctatcgactcgtctcgtggtgccctgccgctttctccttcacgactgtgcctgcttccctcaaagcttgacctgagtgagaccgctgatcctacctctcagagagccatttcacaagaggatttacccgttttcatgccgccgccgccgccacccaaagctctggagcttaaattcaagaaacgagacggaacctatatcttggctggggagtccctttcttccaatggcttggaggattcggcggtggccggcgcctttgtctcatcacatcctaaattagggggtcctcctaagagccctatggcgttgtacgatgacgtttgtgcctctcagcttgacgctctcctggcatctcatcgtctcttgcgcgacattgacactttgcataccaaacaacaacagaaacttgacgaggcgaatcgtaatctcaagtttaaagagaaagagcttgatgatcagatgaggacaatggtggaattgacctccgttctcgaggacaagaaccgcgagataataaagttgaagaatgatctgaccttagtaactcgaagcaaaaatgaggagttcccagaaggtgatgctcagatgaagcttgtatcagccaaatacttccgactcgggtggaaccaagccttgactgaagaaggcaaaaggcgttacgtaggccctgatgagttcgaccgtttttatgggtttgatcctatgggttattctcccattcgtggcatgcaaccaggagatgtcccatcgccagcctcgagcgcgtctgtccacttgagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

627

Amino Acids

70.47

Weight (kDa)

6.78

Isoelectric Point (pI)

45.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 582
AccB1I GGYRCC 2 cut(s) 1118, 1352
AccB7I CCANNNNNTGG 1 cut(s) 75
AccBSI CCGCTC 1 cut(s) 735
AccII CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
AclWI GGATC 2 cut(s) 1181, 1793
AcoI YGGCCR 1 cut(s) 1347
AcsI RAATTY 2 cut(s) 14, 1271
AcuI CTGAAG 2 cut(s) 132, 1761
AcyI GRCGYC 2 cut(s) 704, 1353
AdeI CACNNNGTG 1 cut(s) 994
AfaI GTAC 1 cut(s) 1412
AfiI CCNNNNNNNGG 8 cut(s) 41, 75, 133, 889, 890, 1026, 1379, 1823
AgsI TTSAA 9 cut(s) 93, 296, 349, 430, 604, 871, 955, 1276, 1624
AhdI GACNNNNNGTC 2 cut(s) 703, 928
AjiI CACGTC 1 cut(s) 919
AjnI CCWGG 5 cut(s) 363, 783, 883, 1446, 1834
AleI CACNNNNGTG 1 cut(s) 1144
AloI GAACNNNNNNTCC 2 cut(s) 935, 967
Alw21I GWGCWC 1 cut(s) 50
Alw26I GTCTC 7 cut(s) 216, 629, 1116, 1172, 1278, 1366, 1466
AlwI GGATC 2 cut(s) 1181, 1793
Ama87I CYCGRG 4 cut(s) 683, 1592, 1718, 1858
AoxI GGCC 4 cut(s) 270, 558, 1347, 1765
ApoI RAATTY 2 cut(s) 14, 1271
Asp700I GAANNNNTTC 1 cut(s) 458
AspLEI GCGC 7 cut(s) 110, 401, 793, 795, 1355, 1470, 1865
AspS9I GGNCC 5 cut(s) 270, 558, 1073, 1385, 1766
AsuHPI GGTGA 4 cut(s) 74, 239, 871, 1688
AvaI CYCGRG 4 cut(s) 683, 1592, 1718, 1858
AvaII GGWCC 2 cut(s) 1073, 1385
BaeGI GKGCMC 1 cut(s) 1123
BanI GGYRCC 2 cut(s) 1118, 1352
BanII GRGCYC 2 cut(s) 50, 1400
BauI CACGAG 2 cut(s) 477, 1113
Bbv12I GWGCWC 1 cut(s) 50
BccI CCATC 4 cut(s) 651, 941, 1064, 1855
BceAI ACGGC 2 cut(s) 257, 977
BciT130I CCWGG 5 cut(s) 365, 785, 885, 1448, 1836
BciVI GTATCC 1 cut(s) 672
BclI TGATCA 1 cut(s) 1555
BcoDI GTCTC 7 cut(s) 216, 629, 1116, 1172, 1278, 1366, 1466
BfaI CTAG 2 cut(s) 498, 632
BfoI RGCGCY 1 cut(s) 1356
BfuI GTATCC 1 cut(s) 672
BisI GCNGC 5 cut(s) 1127, 1238, 1241, 1244, 1247
BlpI GCTNAGC 1 cut(s) 407
BlsI GCNGC 5 cut(s) 1128, 1239, 1242, 1245, 1248
Bme1390I CCNGG 5 cut(s) 365, 785, 885, 1448, 1836
Bme18I GGWCC 2 cut(s) 1073, 1385
BmeRI GACNNNNNGTC 2 cut(s) 703, 928
BmeT110I CYCGRG 4 cut(s) 683, 1592, 1718, 1858
BmgBI CACGTC 1 cut(s) 919
BmgT120I GGNCC 5 cut(s) 270, 558, 1073, 1385, 1766
BmiI GGNNCC 7 cut(s) 239, 1075, 1120, 1291, 1354, 1386, 1727
BmrFI CCNGG 5 cut(s) 365, 785, 885, 1448, 1836
BmsI GCATC 5 cut(s) 18, 187, 295, 1460, 1669
BplI GAGNNNNNCTC 2 cut(s) 19, 51
BpmI CTGGAG 2 cut(s) 767, 1283
Bpu10I CCTNAGC 1 cut(s) 216
Bpu1102I GCTNAGC 1 cut(s) 407
BpuEI CTTGAG 3 cut(s) 554, 576, 1514
BsaAI YACGTR 1 cut(s) 1762
BsaHI GRCGYC 2 cut(s) 704, 1353
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 6 cut(s) 74, 363, 364, 554, 883, 1025
Bsc4I CCNNNNNNNGG 8 cut(s) 41, 75, 133, 889, 890, 1026, 1379, 1823
Bse118I RCCGGY 1 cut(s) 1349
BseBI CCWGG 5 cut(s) 365, 785, 885, 1448, 1836
BseDI CCNNGG 6 cut(s) 74, 363, 364, 554, 883, 1025
BseGI GGATG 4 cut(s) 286, 662, 916, 1369
BseLI CCNNNNNNNGG 8 cut(s) 41, 75, 133, 889, 890, 1026, 1379, 1823
BseMII CTCAG 7 cut(s) 63, 683, 855, 1163, 1211, 1445, 1697
BsePI GCGCGC 1 cut(s) 791
BseRI GAGGAG 3 cut(s) 986, 1014, 1676
BseSI GKGCMC 1 cut(s) 1123
BseYI CCCAGC 2 cut(s) 905, 1304
Bsh1236I CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
Bsh1285I CGRYCG 1 cut(s) 1783
BshFI GGCC 4 cut(s) 272, 560, 1349, 1767
BshNI GGYRCC 2 cut(s) 1118, 1352
BsiEI CGRYCG 1 cut(s) 1783
BsiHKAI GWGCWC 1 cut(s) 50
BsiHKCI CYCGRG 4 cut(s) 683, 1592, 1718, 1858
BsiSI CCGG 1 cut(s) 1350
BslFI GGGAC 4 cut(s) 956, 1059, 1297, 1829
BslI CCNNNNNNNGG 8 cut(s) 41, 75, 133, 889, 890, 1026, 1379, 1823
BsmAI GTCTC 7 cut(s) 216, 629, 1116, 1172, 1278, 1366, 1466
BsmBI CGTCTC 3 cut(s) 1116, 1278, 1466
BsmFI GGGAC 4 cut(s) 956, 1059, 1297, 1829
BsmI GAATGC 1 cut(s) 88
BsnI GGCC 4 cut(s) 272, 560, 1349, 1767
Bso31I GGTCTC 1 cut(s) 1172
BsoBI CYCGRG 4 cut(s) 683, 1592, 1718, 1858
Bsp1286I GDGCHC 3 cut(s) 50, 1123, 1400
Bsp143I GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
Bsp1720I GCTNAGC 1 cut(s) 407
Bsp68I TCGCGA 1 cut(s) 566
BspANI GGCC 4 cut(s) 272, 560, 1349, 1767
BspCNI CTCAG 7 cut(s) 62, 682, 854, 1164, 1210, 1444, 1696
BspFNI CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
BspLI GGNNCC 7 cut(s) 239, 1075, 1120, 1291, 1354, 1386, 1727
BspPI GGATC 2 cut(s) 1181, 1793
BspT107I GGYRCC 2 cut(s) 1118, 1352
BspTNI GGTCTC 1 cut(s) 1172
BsrBI CCGCTC 1 cut(s) 735
BsrFI RCCGGY 1 cut(s) 1349
BssAI RCCGGY 1 cut(s) 1349
BssECI CCNNGG 6 cut(s) 74, 363, 364, 554, 883, 1025
BssHII GCGCGC 1 cut(s) 791
BssMI GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
BssNI GRCGYC 2 cut(s) 704, 1353
BssSI CACGAG 2 cut(s) 477, 1113
BssT1I CCWWGG 1 cut(s) 74
Bst2BI CACGAG 2 cut(s) 477, 1113
Bst2UI CCWGG 5 cut(s) 365, 785, 885, 1448, 1836
Bst4CI ACNGT 4 cut(s) 485, 877, 1146, 1784
BstACI GRCGYC 2 cut(s) 704, 1353
BstBAI YACGTR 1 cut(s) 1762
BstC8I GCNNGC 7 cut(s) 7, 623, 793, 1151, 1351, 1829, 1854
BstENI CCTNNNNNAGG 2 cut(s) 39, 1377
BstF5I GGATG 4 cut(s) 286, 662, 916, 1369
BstFNI CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
BstH2I RGCGCY 1 cut(s) 1356
BstHHI GCGC 7 cut(s) 110, 401, 793, 795, 1355, 1470, 1865
BstKTI GATC 8 cut(s) 207, 339, 513, 530, 1189, 1558, 1633, 1801
BstMAI GTCTC 7 cut(s) 216, 629, 1116, 1172, 1278, 1366, 1466
BstMBI GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
BstMCI CGRYCG 1 cut(s) 1783
BstNI CCWGG 5 cut(s) 365, 785, 885, 1448, 1836
BstNSI RCATGY 2 cut(s) 749, 1831
BstSCI CCNGG 5 cut(s) 363, 783, 883, 1446, 1834
BstSLI GKGCMC 1 cut(s) 1123
BstSNI TACGTA 1 cut(s) 1762
BstUI CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
BstXI CCANNNNNNTGG 2 cut(s) 1261, 1330
BsuI GTATCC 1 cut(s) 672
BsuRI GGCC 4 cut(s) 272, 560, 1349, 1767
BtgZI GCGATG 2 cut(s) 1083, 1833
BtrI CACGTC 1 cut(s) 919
BtsCI GGATG 4 cut(s) 286, 662, 916, 1369
BtsIMutI CAGTG 1 cut(s) 490
BtuMI TCGCGA 1 cut(s) 566
Cac8I GCNNGC 7 cut(s) 7, 623, 793, 1151, 1351, 1829, 1854
CfoI GCGC 7 cut(s) 110, 401, 793, 795, 1355, 1470, 1865
Cfr10I RCCGGY 1 cut(s) 1349
Cfr13I GGNCC 5 cut(s) 270, 558, 1073, 1385, 1766
CseI GACGC 5 cut(s) 94, 170, 693, 1448, 1854
Csp6I GTAC 1 cut(s) 1411
CviAII CATG 5 cut(s) 700, 746, 796, 1234, 1828
CviQI GTAC 1 cut(s) 1411
DinI GGCGCC 1 cut(s) 1354
DpnI GATC 8 cut(s) 206, 338, 512, 529, 1188, 1557, 1632, 1800
DpnII GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
DraI TTTAAA 1 cut(s) 1537
DraIII CACNNNGTG 1 cut(s) 994
DriI GACNNNNNGTC 2 cut(s) 703, 928
EaeI YGGCCR 1 cut(s) 1347
Eam1105I GACNNNNNGTC 2 cut(s) 703, 928
Ecl136II GAGCTC 1 cut(s) 48
Eco105I TACGTA 1 cut(s) 1762
Eco130I CCWWGG 1 cut(s) 74
Eco24I GRGCYC 2 cut(s) 50, 1400
Eco31I GGTCTC 1 cut(s) 1172
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 2 cut(s) 1073, 1385
Eco53kI GAGCTC 1 cut(s) 48
Eco57I CTGAAG 2 cut(s) 132, 1761
Eco88I CYCGRG 4 cut(s) 683, 1592, 1718, 1858
EcoICRI GAGCTC 1 cut(s) 48
EcoNI CCTNNNNNAGG 2 cut(s) 39, 1377
EcoO109I RGGNCCY 3 cut(s) 558, 1385, 1766
EcoRII CCWGG 5 cut(s) 363, 783, 883, 1446, 1834
EcoRV GATATC 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 74
EcoT38I GRGCYC 2 cut(s) 50, 1400
EgeI GGCGCC 1 cut(s) 1354
EheI GGCGCC 1 cut(s) 1354
ErhI CCWWGG 1 cut(s) 74
Esp3I CGTCTC 3 cut(s) 1116, 1278, 1466
FaeI CATG 5 cut(s) 703, 749, 799, 1237, 1831
FaqI GGGAC 4 cut(s) 956, 1059, 1297, 1829
FatI CATG 5 cut(s) 699, 745, 795, 1233, 1827
FbaI TGATCA 1 cut(s) 1555
Fnu4HI GCNGC 5 cut(s) 1127, 1238, 1241, 1244, 1247
FokI GGATG 4 cut(s) 273, 669, 923, 1356
FriOI GRGCYC 2 cut(s) 50, 1400
Fsp4HI GCNGC 5 cut(s) 1127, 1238, 1241, 1244, 1247
FspBI CTAG 2 cut(s) 498, 632
GlaI GCGC 7 cut(s) 109, 400, 792, 794, 1354, 1469, 1864
GluI GCNGC 5 cut(s) 1127, 1238, 1241, 1244, 1247
GsaI CCCAGC 2 cut(s) 909, 1308
GsuI CTGGAG 2 cut(s) 767, 1283
HaeII RGCGCY 1 cut(s) 1356
HaeIII GGCC 4 cut(s) 272, 560, 1349, 1767
HapII CCGG 1 cut(s) 1350
HgaI GACGC 5 cut(s) 94, 170, 693, 1448, 1854
HhaI GCGC 7 cut(s) 110, 401, 793, 795, 1355, 1470, 1865
Hin1I GRCGYC 2 cut(s) 704, 1353
Hin1II CATG 5 cut(s) 703, 749, 799, 1237, 1831
Hin6I GCGC 7 cut(s) 108, 399, 791, 793, 1353, 1468, 1863
HinP1I GCGC 7 cut(s) 108, 399, 791, 793, 1353, 1468, 1863
HindIII AAGCTT 2 cut(s) 1163, 1691
HinfI GANTC 9 cut(s) 23, 53, 637, 830, 1106, 1310, 1337, 1519, 1716
HpaII CCGG 1 cut(s) 1350
HphI GGTGA 4 cut(s) 74, 239, 871, 1688
Hpy166II GTNNAC 3 cut(s) 65, 922, 1873
Hpy8I GTNNAC 3 cut(s) 65, 922, 1873
Hpy99I CGWCG 3 cut(s) 88, 197, 920
HpyAV CCTTC 9 cut(s) 448, 571, 617, 726, 920, 993, 1146, 1667, 1739
HpyCH4III ACNGT 4 cut(s) 485, 877, 1146, 1784
HpyCH4IV ACGT 3 cut(s) 918, 1419, 1761
HpyCH4V TGCA 4 cut(s) 286, 625, 1486, 1831
HpySE526I ACGT 3 cut(s) 918, 1419, 1761
Hsp92I GRCGYC 2 cut(s) 704, 1353
Hsp92II CATG 5 cut(s) 703, 749, 799, 1237, 1831
HspAI GCGC 7 cut(s) 108, 399, 791, 793, 1353, 1468, 1863
KasI GGCGCC 1 cut(s) 1352
KroI GCCGGC 1 cut(s) 1349
KroNI GCCGGC 1 cut(s) 1351
Ksp22I TGATCA 1 cut(s) 1555
Kzo9I GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
LmnI GCTCC 5 cut(s) 45, 786, 820, 1063, 1264
LweI GCATC 5 cut(s) 18, 187, 295, 1460, 1669
MaeI CTAG 2 cut(s) 498, 632
MaeII ACGT 3 cut(s) 918, 1419, 1761
MaeIII GTNAC 5 cut(s) 479, 877, 1002, 1642, 1757
MalI GATC 8 cut(s) 206, 338, 512, 529, 1188, 1557, 1632, 1800
MbiI CCGCTC 1 cut(s) 735
MboI GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
MboII GAAGA 4 cut(s) 460, 1311, 1636, 1754
MfeI CAATTG 1 cut(s) 394
MhlI GDGCHC 3 cut(s) 50, 1123, 1400
Mly113I GGCGCC 1 cut(s) 1353
MlyI GAGTC 5 cut(s) 62, 631, 1100, 1319, 1710
MmeI TCCRAC 1 cut(s) 1738
MroNI GCCGGC 1 cut(s) 1349
MroXI GAANNNNTTC 1 cut(s) 458
MseI TTAA 4 cut(s) 300, 858, 1269, 1536
MslI CAYNNNNRTG 1 cut(s) 1144
MspA1I CMGCKG 1 cut(s) 1184
MspI CCGG 1 cut(s) 1350
MspR9I CCNGG 5 cut(s) 365, 785, 885, 1448, 1836
MunI CAATTG 1 cut(s) 394
Mva1269I GAATGC 1 cut(s) 88
MvaI CCWGG 5 cut(s) 365, 785, 885, 1448, 1836
MvnI CGCG 6 cut(s) 566, 621, 793, 1470, 1608, 1865
NaeI GCCGGC 1 cut(s) 1351
NarI GGCGCC 1 cut(s) 1353
NdeII GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
NgoMIV GCCGGC 1 cut(s) 1349
NlaIII CATG 5 cut(s) 703, 749, 799, 1237, 1831
NlaIV GGNNCC 7 cut(s) 239, 1075, 1120, 1291, 1354, 1386, 1727
NmuCI GTSAC 2 cut(s) 479, 877
NruI TCGCGA 1 cut(s) 566
NspI RCATGY 2 cut(s) 749, 1831
OliI CACNNNNGTG 1 cut(s) 1144
PaeI GCATGC 1 cut(s) 1831
PaeR7I CTCGAG 3 cut(s) 683, 1592, 1858
PasI CCCWGGG 1 cut(s) 364
PauI GCGCGC 1 cut(s) 791
PcsI WCGNNNNNNNCGW 3 cut(s) 681, 921, 1856
PctI GAATGC 1 cut(s) 88
PdiI GCCGGC 1 cut(s) 1351
PdmI GAANNNNTTC 1 cut(s) 458
PfeI GAWTC 4 cut(s) 23, 830, 1337, 1519
PflMI CCANNNNNTGG 1 cut(s) 75
PkrI GCNGC 5 cut(s) 1128, 1239, 1242, 1245, 1248
PleI GAGTC 5 cut(s) 61, 631, 1100, 1318, 1710
PluTI GGCGCC 1 cut(s) 1356
PpsI GAGTC 5 cut(s) 61, 631, 1100, 1318, 1710
Ppu21I YACGTR 1 cut(s) 1762
PpuMI RGGWCCY 1 cut(s) 1385
PsiI TTATAA 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 50
Psp5II RGGWCCY 1 cut(s) 1385
Psp6I CCWGG 5 cut(s) 363, 783, 883, 1446, 1834
PspFI CCCAGC 2 cut(s) 905, 1304
PspGI CCWGG 5 cut(s) 363, 783, 883, 1446, 1834
PspN4I GGNNCC 7 cut(s) 239, 1075, 1120, 1291, 1354, 1386, 1727
PspPI GGNCC 5 cut(s) 270, 558, 1073, 1385, 1766
PspPPI RGGWCCY 1 cut(s) 1385
PspXI VCTCGAGB 1 cut(s) 1858
PteI GCGCGC 1 cut(s) 791
RruI TCGCGA 1 cut(s) 566
RsaI GTAC 1 cut(s) 1412
RsaNI GTAC 1 cut(s) 1411
RseI CAYNNNNRTG 1 cut(s) 1144
SacI GAGCTC 1 cut(s) 50
SaqAI TTAA 4 cut(s) 300, 858, 1269, 1536
SatI GCNGC 5 cut(s) 1127, 1238, 1241, 1244, 1247
Sau3AI GATC 8 cut(s) 204, 336, 510, 527, 1186, 1555, 1630, 1798
Sau96I GGNCC 5 cut(s) 270, 558, 1073, 1385, 1766
SchI GAGTC 5 cut(s) 62, 631, 1100, 1319, 1710
ScrFI CCNGG 5 cut(s) 365, 785, 885, 1448, 1836
SduI GDGCHC 3 cut(s) 50, 1123, 1400
SfaNI GCATC 5 cut(s) 18, 187, 295, 1460, 1669
SfoI GGCGCC 1 cut(s) 1354
Sfr274I CTCGAG 3 cut(s) 683, 1592, 1858
SinI GGWCC 2 cut(s) 1073, 1385
SlaI CTCGAG 3 cut(s) 683, 1592, 1858
SmiMI CAYNNNNRTG 1 cut(s) 1144
SmlI CTYRAG 7 cut(s) 533, 591, 683, 1529, 1592, 1858, 1876
SmoI CTYRAG 7 cut(s) 533, 591, 683, 1529, 1592, 1858, 1876
SnaBI TACGTA 1 cut(s) 1762
SphI GCATGC 1 cut(s) 1831
SspDI GGCGCC 1 cut(s) 1352
SspI AATATT 2 cut(s) 187, 416
SspMI CTAG 2 cut(s) 498, 632
SstI GAGCTC 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 363, 783, 883, 1446, 1834
StyI CCWWGG 1 cut(s) 74
TaaI ACNGT 4 cut(s) 485, 877, 1146, 1784
TaiI ACGT 3 cut(s) 921, 1422, 1764
TaqI TCGA 8 cut(s) 26, 684, 739, 1104, 1593, 1648, 1779, 1859
TaqII GACCGA 1 cut(s) 124
TauI GCSGC 5 cut(s) 1129, 1240, 1243, 1246, 1249
TfiI GAWTC 4 cut(s) 23, 830, 1337, 1519
Tru1I TTAA 4 cut(s) 300, 858, 1269, 1536
Tru9I TTAA 4 cut(s) 300, 858, 1269, 1536
TscAI CASTG 1 cut(s) 490
TseFI GTSAC 2 cut(s) 479, 877
Tsp45I GTSAC 2 cut(s) 479, 877
TspDTI ATGAA 3 cut(s) 467, 1222, 1703
TspGWI ACGGA 2 cut(s) 1302, 1576
TspRI CASTG 1 cut(s) 490
Van91I CCANNNNNTGG 1 cut(s) 75
VpaK11BI GGWCC 2 cut(s) 1073, 1385
XagI CCTNNNNNAGG 2 cut(s) 39, 1377
XapI RAATTY 2 cut(s) 14, 1271
XceI RCATGY 2 cut(s) 749, 1831
XhoI CTCGAG 3 cut(s) 683, 1592, 1858
XmnI GAANNNNTTC 1 cut(s) 458
XspI CTAG 2 cut(s) 498, 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.