Rmu_sc0002759.1_g000071

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002759.1
OG0000480
Physical Location & Seq
Reverse (-)
340303 .. 346273
5971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002759.1_g000071.1.cds

Sequence Viewer

Length: 3495 bp
atgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgagctctttccgtaacctccctatgcgatctccccccgtcacctccctatgcgagctccctccgtaacctccctatgcgatctccctccgtaacctccctatgcgagatcccaactcctacccggacctcggctcgcctggatccgaaagcgagtctgacccgatcgcccacccaacccggtcgtcaccagtctccggcccactctggaacttttctggcccgatttcggccggatttttccgggtttgacgccccaaaacgtctccgacttcttctgcttgtctattgccgttcgtctcctataagagtagctcagcctggacttgttctcctccaccctcttccctctgcgacaccggaaaaccgcgcctccatctcgcctccgaccggttccccgtcgctcttgacgacgtttcgcatcttccttcgatcgccagcgttccaccctgctattgcagccgctgatccctcacctcacgcggcgccgtcgagttcgacagagccggtacttggcattgcgctccccatggcgcgcaccaaattttctgatttatctgtatctcagaacgggggcctggagacccatggagaacccacgccttggcaaccgacgcgtttgactctagagaagtgtgctgaggagtattctatcccatcatcggttaaactttcaattgttcccgcagatgcagatatctacacgggtaggaatattcccgacgatgccttgctactgtctcctaagcatttacgttatgttaggttccccatacatcctgtatttcaacttatgtgggcggtgctcggtctgcatcctcttcaactcaacccgaattcctaccttgtattatctgctttttttattatgggtttgaaatgggaagtatccctagggctgtctgattttctttacctttacaactgcgccaagctgaacaaacattttcggtatttcaatttcacacccttcccaaaaatgaaggtgtttacagggatttccgctcgcgacaacgattggaaatctagggttctgatgattttgggtgattggcggtctcccgaactggatttgcttccctcgaaagccttcgccgacgacctcgcctacaaaatttctcaggctaagttcaacctcccccttaaccgggtagagtggcttgagacacacttggttgggcgaggatggtatccctctcaatttgcgacccttgggaaccttcttgatgtggcatctattcgccccttcgctctgtttggccgctacaaaacgcgcgtggatcaatctctttcgggaaagtcattggtcctcttggttacaagcatggagggccacttctatgtgtcagagcgttgcgaacccgcattcttcgagtacctcgcggctaaagaaatgttcaggaatgtcatccctggctcgggttttttggtggttgaggaggatggtgtgcatgaggattccgaggaaagggaagaggaacctaatggcgatggtgccgacgagggggtgcctttccacactgtgagggaactacctcagatgattccccctcctcggaaattgaagaagcgaagggttgagagccttcctcgttgtattggggtcgttgatgttccatctgccagctcgtctcgaagtcctttgcctctttctccttcgcacggaggttcgcttctccagggacctgttctgaccgaagctgctaatcctgtaatccagagagcttcttcattgccagaggacccgaccgctcttgtgccccccctgccaccgaaagctttggagctcaagttcaagaaaagggatggttcctatattttagcaggggaatctcttgcttccaatggcttggcagcattggcggttgttggtgcctttgtagcatcacaccctaaactgggaggtccctccaagagccctatggcgttgtatgacgacgctcttctggcatcccatcgcctcttacgcggtattgacgctctccattccaaacaacaacagaaactcgacgaagcaaatagtaaactcgagttcaaggagaaagagcttgacgatcagatgaggacaatggttgaattagcctccgtccttgaggacaaaaaccaagagataacgaagctaaagaatgatctggccctggtcactcgaagcaaagacgaggagttccagaaaggggccgctcaaatcaatcgcgtgtctaccaaatacttccgacttgggtggaatcaggctctaactgatgaagagaagaggtgctacataggtcctgatgagtttgaccgctttttcgggtttgaacctatggcttattctcccatccacggcatgattttaggagatgtttcttcgtcggcatctagcgcatccggcgatgaagatgaggatgtgtcatctgatgcagtcatcctcagccttcgtgcccaattacccgaacttcctgctgcaggtcgtggaaaacaaatttctgccgtcgatgaactcactcctgaccgtcatgcttcctccccgatcatgatcatgtctgatagctcatcgaatagatcgcgcggatgcgtaaaagagggtcgctccgacgacgacttttgtctctaccttgaggacatgctggactctcctgacgccgtggagatgaacactcgccgtacttctcggggagatgccggctccagcaggcctcggcgtcgaagtatgagcatcgacagggctcggagtccagaatcgcaccgccttcgagctctacaagaagaatctttcgtcttgcaagattctttagaacataccatgtcagagatccgtaagctgaaggcggagattcgcgatttgtctgcggaggttcagcattccaaagatcacgctgaacacctcaaaattgagctacgcgaatgctacaggcgagagaggtttttagacgaagtcagggttcaaagtcgtgaagatggctattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1164

Amino Acids

128.44

Weight (kDa)

7.8

Isoelectric Point (pI)

62.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2984
AccB1I GGYRCC 4 cut(s) 1033, 2042, 2056, 2420
AccB7I CCANNNNNTGG 1 cut(s) 1152
AccBSI CCGCTC 3 cut(s) 1553, 2300, 2729
AccI GTMKAC 1 cut(s) 2747
AclWI GGATC 6 cut(s) 652, 686, 699, 1010, 1836, 3334
AcoI YGGCCR 2 cut(s) 779, 1807
AcsI RAATTY 4 cut(s) 1091, 1384, 1662, 3009
AcuI CTGAAG 1 cut(s) 3371
AcyI GRCGYC 4 cut(s) 801, 1034, 3168, 3229
AdeI CACNNNGTG 1 cut(s) 2071
AfaI GTAC 3 cut(s) 1059, 1925, 3193
AflIII ACRYGT 1 cut(s) 1163
AgeI ACCGGT 1 cut(s) 938
AjnI CCWGG 6 cut(s) 687, 868, 1125, 1960, 2226, 2685
AloI GAACNNNNNNTCC 2 cut(s) 2324, 2356
Alw26I GTCTC 9 cut(s) 747, 818, 852, 1124, 1293, 1611, 1706, 2184, 3140
AlwI GGATC 6 cut(s) 652, 686, 699, 1010, 1836, 3334
AlwNI CAGNNNCTG 1 cut(s) 1013
Ama87I CYCGRG 3 cut(s) 1966, 2576, 3198
AoxI GGCC 9 cut(s) 747, 768, 779, 1123, 1807, 1879, 2682, 2724, 3221
ApeKI GCWGC 4 cut(s) 1007, 2249, 2402, 2990
ApoI RAATTY 4 cut(s) 1091, 1384, 1662, 3009
ArsI GACNNNNNNTTYG 2 cut(s) 2819, 2851
AsiGI ACCGGT 1 cut(s) 938
Asp700I GAANNNNTTC 1 cut(s) 1637
AspA2I CCTAGG 1 cut(s) 1441
AspLEI GCGC 9 cut(s) 920, 1036, 1072, 1084, 1086, 1478, 1824, 2912, 3096
AsuC2I CCSGG 4 cut(s) 673, 729, 793, 1697
AvaI CYCGRG 3 cut(s) 1966, 2576, 3198
AvaII GGWCC 6 cut(s) 675, 1855, 2231, 2290, 2453, 2813
AvrII CCTAGG 1 cut(s) 1441
BaeGI GKGCMC 2 cut(s) 2310, 2971
BamHI GGATCC 1 cut(s) 691
BanI GGYRCC 4 cut(s) 1033, 2042, 2056, 2420
BarI GAAGNNNNNNTAC 2 cut(s) 2789, 2821
BbvCI CCTCAGC 2 cut(s) 1188, 2957
BbvI GCAGC 4 cut(s) 1019, 2236, 2414, 2977
BceAI ACGGC 6 cut(s) 825, 1021, 2887, 3002, 3155, 3174
BcgI CGANNNNNNTGC 6 cut(s) 2969, 3003, 3260, 3294, 3356, 3390
BciT130I CCWGG 6 cut(s) 689, 870, 1127, 1962, 2228, 2687
BciVI GTATCC 2 cut(s) 1447, 1749
BclI TGATCA 1 cut(s) 3063
BcnI CCSGG 4 cut(s) 673, 729, 793, 1697
BcoDI GTCTC 9 cut(s) 747, 818, 852, 1124, 1293, 1611, 1706, 2184, 3140
BfaI CTAG 4 cut(s) 1175, 1442, 1575, 2907
BfmI CTRYAG 2 cut(s) 2991, 3436
BfoI RGCGCY 1 cut(s) 1037
BfuAI ACCTGC 1 cut(s) 2984
BfuI GTATCC 2 cut(s) 1447, 1749
BisI GCNGC 9 cut(s) 1008, 1011, 1032, 1810, 1932, 2250, 2403, 2727, 2991
BlnI CCTAGG 1 cut(s) 1441
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 9 cut(s) 1009, 1012, 1033, 1811, 1933, 2251, 2404, 2728, 2992
Bme18I GGWCC 6 cut(s) 675, 1855, 2231, 2290, 2453, 2813
BmeT110I CYCGRG 3 cut(s) 1966, 2576, 3198
BmrI ACTGGG 1 cut(s) 2456
BmuI ACTGGG 1 cut(s) 2456
BoxI GACNNNNGTC 1 cut(s) 3132
BplI GAGNNNNNCTC 4 cut(s) 2122, 2154, 3101, 3133
BpmI CTGGAG 3 cut(s) 1148, 2210, 3199
Bpu10I CCTNAGC 3 cut(s) 1188, 1293, 2957
Bpu1102I GCTNAGC 1 cut(s) 864
BpuEI CTTGAG 4 cut(s) 1730, 2321, 2660, 3164
BpuMI CCSGG 4 cut(s) 673, 729, 793, 1697
BsaBI GATNNNNATC 1 cut(s) 3062
BsaHI GRCGYC 4 cut(s) 801, 1034, 3168, 3229
BsaI GGTCTC 2 cut(s) 1124, 1611
BsaWI WCCGGW 2 cut(s) 907, 938
BsaXI ACNNNNNCTCC 6 cut(s) 864, 894, 905, 935, 2324, 2354
Bse118I RCCGGY 3 cut(s) 938, 1054, 3209
Bse1I ACTGG 3 cut(s) 739, 1620, 2451
Bse3DI GCAATG 2 cut(s) 1065, 2279
Bse8I GATNNNNATC 1 cut(s) 3062
BseBI CCWGG 6 cut(s) 689, 870, 1127, 1962, 2228, 2687
BseJI GATNNNNATC 1 cut(s) 3062
BseMI GCAATG 2 cut(s) 1065, 2279
BseMII CTCAG 6 cut(s) 878, 1127, 1179, 1682, 2099, 2971
BseNI ACTGG 3 cut(s) 739, 1620, 2451
BsePI GCGCGC 1 cut(s) 1082
BseRI GAGGAG 5 cut(s) 872, 1205, 2000, 2091, 2723
BseSI GKGCMC 2 cut(s) 2310, 2971
BseX3I CGGCCG 1 cut(s) 779
BseXI GCAGC 4 cut(s) 1019, 2236, 2414, 2977
Bsh1285I CGRYCG 6 cut(s) 716, 733, 782, 939, 983, 2298
BshFI GGCC 9 cut(s) 749, 770, 781, 1125, 1809, 1881, 2684, 2726, 3223
BshNI GGYRCC 4 cut(s) 1033, 2042, 2056, 2420
BshTI ACCGGT 1 cut(s) 938
BsiEI CGRYCG 6 cut(s) 716, 733, 782, 939, 983, 2298
BsiHKCI CYCGRG 3 cut(s) 1966, 2576, 3198
BslFI GGGAC 2 cut(s) 2244, 2439
BsmAI GTCTC 9 cut(s) 747, 818, 852, 1124, 1293, 1611, 1706, 2184, 3140
BsmBI CGTCTC 3 cut(s) 818, 852, 2184
BsmFI GGGAC 2 cut(s) 2244, 2439
BsmI GAATGC 3 cut(s) 1913, 3388, 3437
BsnI GGCC 9 cut(s) 749, 770, 781, 1125, 1809, 1881, 2684, 2726, 3223
Bso31I GGTCTC 2 cut(s) 1124, 1611
BsoBI CYCGRG 3 cut(s) 1966, 2576, 3198
Bsp1720I GCTNAGC 1 cut(s) 864
Bsp19I CCATGG 2 cut(s) 1077, 1135
Bsp68I TCGCGA 2 cut(s) 1557, 3366
BspANI GGCC 9 cut(s) 749, 770, 781, 1125, 1809, 1881, 2684, 2726, 3223
BspCNI CTCAG 6 cut(s) 877, 1126, 1180, 1681, 2098, 2970
BspHI TCATGA 1 cut(s) 3060
BspMAI CTGCAG 1 cut(s) 2995
BspMI ACCTGC 1 cut(s) 2984
BspPI GGATC 6 cut(s) 652, 686, 699, 1010, 1836, 3334
BspQI GCTCTTC 1 cut(s) 2496
BspT107I GGYRCC 4 cut(s) 1033, 2042, 2056, 2420
BspTNI GGTCTC 2 cut(s) 1124, 1611
BsrBI CCGCTC 3 cut(s) 1553, 2300, 2729
BsrDI GCAATG 2 cut(s) 1065, 2279
BsrFI RCCGGY 3 cut(s) 938, 1054, 3209
BsrI ACTGG 3 cut(s) 739, 1620, 2451
BssAI RCCGGY 3 cut(s) 938, 1054, 3209
BssHII GCGCGC 1 cut(s) 1082
BssNI GRCGYC 4 cut(s) 801, 1034, 3168, 3229
BssT1I CCWWGG 5 cut(s) 1077, 1135, 1151, 1441, 1759
Bst2UI CCWGG 6 cut(s) 689, 870, 1127, 1962, 2228, 2687
Bst4CI ACNGT 3 cut(s) 1287, 2071, 3041
Bst6I CTCTTC 6 cut(s) 897, 1374, 2016, 2496, 2787, 2792
BstACI GRCGYC 4 cut(s) 801, 1034, 3168, 3229
BstDEI CTNAG 8 cut(s) 864, 1113, 1188, 1293, 1668, 1674, 2085, 2957
BstDSI CCRYGG 4 cut(s) 1077, 1135, 2869, 3171
BstENI CCTNNNNNAGG 1 cut(s) 2991
BstH2I RGCGCY 1 cut(s) 1037
BstHHI GCGC 9 cut(s) 920, 1036, 1072, 1084, 1086, 1478, 1824, 2912, 3096
BstMAI GTCTC 9 cut(s) 747, 818, 852, 1124, 1293, 1611, 1706, 2184, 3140
BstMCI CGRYCG 6 cut(s) 716, 733, 782, 939, 983, 2298
BstNI CCWGG 6 cut(s) 689, 870, 1127, 1962, 2228, 2687
BstNSI RCATGY 1 cut(s) 3154
BstPAI GACNNNNGTC 1 cut(s) 3132
BstSFI CTRYAG 2 cut(s) 2991, 3436
BstSLI GKGCMC 2 cut(s) 2310, 2971
BstV1I GCAGC 4 cut(s) 1019, 2236, 2414, 2977
BstX2I RGATCY 3 cut(s) 657, 691, 3339
BstXI CCANNNNNNTGG 1 cut(s) 2398
BstYI RGATCY 3 cut(s) 657, 691, 3339
BstZI CGGCCG 1 cut(s) 779
BsuI GTATCC 2 cut(s) 1447, 1749
BsuRI GGCC 9 cut(s) 749, 770, 781, 1125, 1809, 1881, 2684, 2726, 3223
BtgI CCRYGG 4 cut(s) 1077, 1135, 2869, 3171
BtgZI GCGATG 3 cut(s) 2052, 2489, 2934
BtsIMutI CAGTG 1 cut(s) 2067
BtuMI TCGCGA 2 cut(s) 1557, 3366
BveI ACCTGC 1 cut(s) 2984
CaiI CAGNNNCTG 1 cut(s) 1013
CciI TCATGA 1 cut(s) 3060
CfoI GCGC 9 cut(s) 920, 1036, 1072, 1084, 1086, 1478, 1824, 2912, 3096
Cfr10I RCCGGY 3 cut(s) 938, 1054, 3209
CseI GACGC 6 cut(s) 809, 1171, 2495, 2534, 3176, 3218
Csp6I GTAC 3 cut(s) 1058, 1924, 3192
CspAI ACCGGT 1 cut(s) 938
CspCI CAANNNNNGTGG 2 cut(s) 1325, 1360
CviQI GTAC 3 cut(s) 1058, 1924, 3192
DdeI CTNAG 8 cut(s) 864, 1113, 1188, 1293, 1668, 1674, 2085, 2957
DinI GGCGCC 1 cut(s) 1035
DraIII CACNNNGTG 1 cut(s) 2071
EaeI YGGCCR 2 cut(s) 779, 1807
EagI CGGCCG 1 cut(s) 779
Eam1104I CTCTTC 6 cut(s) 897, 1374, 2016, 2496, 2787, 2792
EarI CTCTTC 6 cut(s) 897, 1374, 2016, 2496, 2787, 2792
EciI GGCGGA 1 cut(s) 3371
EclXI CGGCCG 1 cut(s) 779
Eco130I CCWWGG 5 cut(s) 1077, 1135, 1151, 1441, 1759
Eco147I AGGCCT 1 cut(s) 3223
Eco31I GGTCTC 2 cut(s) 1124, 1611
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 6 cut(s) 675, 1855, 2231, 2290, 2453, 2813
Eco52I CGGCCG 1 cut(s) 779
Eco57I CTGAAG 1 cut(s) 3371
Eco88I CYCGRG 3 cut(s) 1966, 2576, 3198
EcoNI CCTNNNNNAGG 1 cut(s) 2991
EcoO109I RGGNCCY 5 cut(s) 1123, 2231, 2290, 2453, 2813
EcoRI GAATTC 1 cut(s) 1384
EcoRII CCWGG 6 cut(s) 687, 868, 1125, 1960, 2226, 2685
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 5 cut(s) 1077, 1135, 1151, 1441, 1759
EgeI GGCGCC 1 cut(s) 1035
EheI GGCGCC 1 cut(s) 1035
ErhI CCWWGG 5 cut(s) 1077, 1135, 1151, 1441, 1759
Esp3I CGTCTC 3 cut(s) 818, 852, 2184
FaqI GGGAC 2 cut(s) 2244, 2439
FauI CCCGC 2 cut(s) 1240, 1918
FbaI TGATCA 1 cut(s) 3063
FblI GTMKAC 1 cut(s) 2747
Fnu4HI GCNGC 9 cut(s) 1008, 1011, 1032, 1810, 1932, 2250, 2403, 2727, 2991
Fsp4HI GCNGC 9 cut(s) 1008, 1011, 1032, 1810, 1932, 2250, 2403, 2727, 2991
FspBI CTAG 4 cut(s) 1175, 1442, 1575, 2907
GlaI GCGC 9 cut(s) 919, 1035, 1071, 1083, 1085, 1477, 1823, 2911, 3095
GluI GCNGC 9 cut(s) 1008, 1011, 1032, 1810, 1932, 2250, 2403, 2727, 2991
GsuI CTGGAG 3 cut(s) 1148, 2210, 3199
HaeII RGCGCY 1 cut(s) 1037
HaeIII GGCC 9 cut(s) 749, 770, 781, 1125, 1809, 1881, 2684, 2726, 3223
HgaI GACGC 6 cut(s) 809, 1171, 2495, 2534, 3176, 3218
HhaI GCGC 9 cut(s) 920, 1036, 1072, 1084, 1086, 1478, 1824, 2912, 3096
Hin1I GRCGYC 4 cut(s) 801, 1034, 3168, 3229
Hin6I GCGC 9 cut(s) 918, 1034, 1070, 1082, 1084, 1476, 1822, 2910, 3094
HinP1I GCGC 9 cut(s) 918, 1034, 1070, 1082, 1084, 1476, 1822, 2910, 3094
HindIII AAGCTT 1 cut(s) 2325
Hpy166II GTNNAC 3 cut(s) 1539, 2573, 2748
Hpy8I GTNNAC 3 cut(s) 1539, 2573, 2748
HpyCH4III ACNGT 3 cut(s) 1287, 2071, 3041
HpyCH4IV ACGT 3 cut(s) 811, 962, 1303
HpyCH4V TGCA 7 cut(s) 1007, 1241, 1363, 1999, 2948, 2993, 3310
HpyF3I CTNAG 8 cut(s) 864, 1113, 1188, 1293, 1668, 1674, 2085, 2957
HpySE526I ACGT 3 cut(s) 811, 962, 1303
Hsp92I GRCGYC 4 cut(s) 801, 1034, 3168, 3229
HspAI GCGC 9 cut(s) 918, 1034, 1070, 1082, 1084, 1476, 1822, 2910, 3094
KasI GGCGCC 1 cut(s) 1033
KroI GCCGGC 1 cut(s) 3209
KroNI GCCGGC 1 cut(s) 3211
Ksp22I TGATCA 1 cut(s) 3063
LguI GCTCTTC 1 cut(s) 2496
Lsp1109I GCAGC 4 cut(s) 1019, 2236, 2414, 2977
MaeI CTAG 4 cut(s) 1175, 1442, 1575, 2907
MaeII ACGT 3 cut(s) 811, 962, 1303
MbiI CCGCTC 3 cut(s) 1553, 2300, 2729
MfeI CAATTG 1 cut(s) 1224
MflI RGATCY 3 cut(s) 657, 691, 3339
MluI ACGCGT 1 cut(s) 1163
Mly113I GGCGCC 1 cut(s) 1034
MlyI GAGTC 4 cut(s) 712, 1165, 3152, 3268
MmeI TCCRAC 4 cut(s) 841, 959, 2785, 3144
MroNI GCCGGC 1 cut(s) 3209
MroXI GAANNNNTTC 1 cut(s) 1637
MseI TTAA 2 cut(s) 1215, 1692
MslI CAYNNNNRTG 2 cut(s) 1887, 3065
MspA1I CMGCKG 1 cut(s) 1013
MunI CAATTG 1 cut(s) 1224
Mva1269I GAATGC 3 cut(s) 1913, 3388, 3437
MvaI CCWGG 6 cut(s) 689, 870, 1127, 1962, 2228, 2687
NaeI GCCGGC 1 cut(s) 3211
NarI GGCGCC 1 cut(s) 1034
NciI CCSGG 4 cut(s) 673, 729, 793, 1697
NcoI CCATGG 2 cut(s) 1077, 1135
NgoMIV GCCGGC 1 cut(s) 3209
NmeAIII GCCGAG 2 cut(s) 659, 3205
NruI TCGCGA 2 cut(s) 1557, 3366
NspI RCATGY 1 cut(s) 3154
PaeR7I CTCGAG 1 cut(s) 2576
PagI TCATGA 1 cut(s) 3060
PauI GCGCGC 1 cut(s) 1082
PceI AGGCCT 1 cut(s) 3223
PciSI GCTCTTC 1 cut(s) 2496
PcsI WCGNNNNNNNCGW 1 cut(s) 956
PctI GAATGC 3 cut(s) 1913, 3388, 3437
PdiI GCCGGC 1 cut(s) 3211
PdmI GAANNNNTTC 1 cut(s) 1637
PfeI GAWTC 8 cut(s) 2006, 2092, 2378, 2773, 3266, 3296, 3314, 3361
PflFI GACNNNGTC 1 cut(s) 3461
PflMI CCANNNNNTGG 1 cut(s) 1152
PinAI ACCGGT 1 cut(s) 938
PkrI GCNGC 9 cut(s) 1009, 1012, 1033, 1811, 1933, 2251, 2404, 2728, 2992
Ple19I CGATCG 2 cut(s) 716, 983
PleI GAGTC 4 cut(s) 711, 1165, 3152, 3267
PluTI GGCGCC 1 cut(s) 1037
PpsI GAGTC 4 cut(s) 711, 1165, 3152, 3267
PpuMI RGGWCCY 4 cut(s) 2231, 2290, 2453, 2813
PshAI GACNNNNGTC 1 cut(s) 3132
Psp5II RGGWCCY 4 cut(s) 2231, 2290, 2453, 2813
Psp6I CCWGG 6 cut(s) 687, 868, 1125, 1960, 2226, 2685
PspGI CCWGG 6 cut(s) 687, 868, 1125, 1960, 2226, 2685
PspPPI RGGWCCY 4 cut(s) 2231, 2290, 2453, 2813
PspXI VCTCGAGB 1 cut(s) 2576
PstI CTGCAG 1 cut(s) 2995
PstNI CAGNNNCTG 1 cut(s) 1013
PsuI RGATCY 3 cut(s) 657, 691, 3339
PsyI GACNNNGTC 1 cut(s) 3461
PteI GCGCGC 1 cut(s) 1082
PvuI CGATCG 2 cut(s) 716, 983
RruI TCGCGA 2 cut(s) 1557, 3366
RsaI GTAC 3 cut(s) 1059, 1925, 3193
RsaNI GTAC 3 cut(s) 1058, 1924, 3192
RseI CAYNNNNRTG 2 cut(s) 1887, 3065
SapI GCTCTTC 1 cut(s) 2496
SaqAI TTAA 2 cut(s) 1215, 1692
SatI GCNGC 9 cut(s) 1008, 1011, 1032, 1810, 1932, 2250, 2403, 2727, 2991
SchI GAGTC 4 cut(s) 712, 1165, 3152, 3268
SfcI CTRYAG 2 cut(s) 2991, 3436
SfoI GGCGCC 1 cut(s) 1035
Sfr274I CTCGAG 1 cut(s) 2576
SinI GGWCC 6 cut(s) 675, 1855, 2231, 2290, 2453, 2813
SlaI CTCGAG 1 cut(s) 2576
SmiMI CAYNNNNRTG 2 cut(s) 1887, 3065
SmlI CTYRAG 5 cut(s) 1709, 2336, 2576, 2639, 3143
SmoI CTYRAG 5 cut(s) 1709, 2336, 2576, 2639, 3143
SseBI AGGCCT 1 cut(s) 3223
SspDI GGCGCC 1 cut(s) 1033
SspI AATATT 1 cut(s) 1264
SspMI CTAG 4 cut(s) 1175, 1442, 1575, 2907
StuI AGGCCT 1 cut(s) 3223
StyI CCWWGG 5 cut(s) 1077, 1135, 1151, 1441, 1759
TaaI ACNGT 3 cut(s) 1287, 2071, 3041
TaiI ACGT 3 cut(s) 814, 965, 1306
TaqII GACCGA 2 cut(s) 1346, 2258
TauI GCSGC 5 cut(s) 1013, 1034, 1812, 1934, 2729
TfiI GAWTC 8 cut(s) 2006, 2092, 2378, 2773, 3266, 3296, 3314, 3361
Tru1I TTAA 2 cut(s) 1215, 1692
Tru9I TTAA 2 cut(s) 1215, 1692
TscAI CASTG 1 cut(s) 2074
TseI GCWGC 4 cut(s) 1007, 2249, 2402, 2990
TspDTI ATGAA 6 cut(s) 1544, 2268, 2805, 2937, 3039, 3194
TspRI CASTG 1 cut(s) 2074
Tth111I GACNNNGTC 1 cut(s) 3461
Van91I CCANNNNNTGG 1 cut(s) 1152
VpaK11BI GGWCC 6 cut(s) 675, 1855, 2231, 2290, 2453, 2813
XagI CCTNNNNNAGG 1 cut(s) 2991
XapI RAATTY 4 cut(s) 1091, 1384, 1662, 3009
XbaI TCTAGA 1 cut(s) 1174
XceI RCATGY 1 cut(s) 3154
XcmI CCANNNNNNNNNTGG 1 cut(s) 2467
XhoI CTCGAG 1 cut(s) 2576
XmaJI CCTAGG 1 cut(s) 1441
XmiI GTMKAC 1 cut(s) 2747
XmnI GAANNNNTTC 1 cut(s) 1637
XspI CTAG 4 cut(s) 1175, 1442, 1575, 2907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.