Rmu_sc0005947.1_g000011

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005947.1
OG0000480
Physical Location & Seq
Forward (+)
33366 .. 36853
3488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005947.1_g000011.1.cds

Sequence Viewer

Length: 1428 bp
atgtggctcttggtttggtttggttttggctacccaagttccaccggatcgaatgaaagggttgcggaaggctcaatggtgttacctacacgaactgctttgagtcggaaaggatactctggagacgtagggtgtctgctatgcccgagtcacgctgaagatgccatgcatttatttatacattgcccgtatgcagttagtgtgtgggctgctgcaaacatagttgtggacacttcttttctagatttcaagaagtttttgttagctttgtcagttgcccagtgttggaagcggagactccttttcaccttcggtgtgaaagaggaggaggggtacctgcaaaagaccctccgatgcctaagtcagtatttttctgagtcggcttataagatttctcaagcgaagttcgaccttccccctagttgcctgcaatggctggagactcatcttatcgggcatggatggtatccctctaagtttacaaccctcgagaattttcttggcatggtgtccaatcgtccttctgttttgtttggctgctacagaacgcatgtgaatcagtctctttcaggaaaagcattaccgctccagctggggaagacaacacagacggagggggatgaggggttcaatggcaacgatgtagaagagagagtgcattcccatgtcgtgagggacctaccccaaataatccccccccctcctcggaaattgaggaagcggaaggctgaaaatgctcctgacagcgacaaccctttgcatgttccctccatcgactcgtctcgtggtgccttgccgccctctccctcacgagggggctcacttccccaaagaactgccccaggcgaagctgctgatcctgctcttcagagatcctcttcgtctcaagaggatccaaccgctttcatgccgtcaccgccacccaaggctttggagctcaaattcaagaaacgggacggcacctatatcttaactggggagaccctttcttccaatggcctggcggcgtcggcggtggccggcgcctttgctctcttggcatctcatcgcctcttgcacgacattgacactttgcataccaaaccacaacagaaactcaacgaggcgaatcgtaaactcgagtttaaagagaaagagctcgacgatctgatgaggacaatggtagaattggcctctgtccttgaggacaagaaatgcgagataacaaggctgaagaatgacctggccttagtaactcgaagcaaagaagaggagttccaaaaaggtgctgctcagatgaagcgcgtgtcaaccaaatacttccgacttgggtggaatcaagctctgactgaagaagacaaaaggcactacgtaggcgctgatgagttcgaccatttttatgggtttgatctatgggttattctcccatccaacctcaagctcgtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

475

Amino Acids

53.13

Weight (kDa)

8.28

Isoelectric Point (pI)

51.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 387
Acc36I ACCTGC 1 cut(s) 345
Acc65I GGTACC 1 cut(s) 333
AccB1I GGYRCC 4 cut(s) 333, 788, 959, 1022
AccBSI CCGCTC 1 cut(s) 586
AccII CGCG 1 cut(s) 1284
AciI CCGC 9 cut(s) 65, 292, 584, 721, 797, 900, 917, 1004, 1013
AclWI GGATC 5 cut(s) 55, 851, 867, 887, 900
AcoI YGGCCR 1 cut(s) 1017
AcsI RAATTY 2 cut(s) 493, 941
AcuI CTGAAG 4 cut(s) 177, 851, 1232, 1350
AcyI GRCGYC 2 cut(s) 1007, 1023
AfaI GTAC 1 cut(s) 335
AfiI CCNNNNNNNGG 4 cut(s) 285, 705, 812, 813
AgsI TTSAA 3 cut(s) 250, 631, 946
AjnI CCWGG 3 cut(s) 841, 999, 1221
AloI GAACNNNNNNTCC 2 cut(s) 611, 643
AluBI AGCT 7 cut(s) 266, 592, 851, 937, 1138, 1322, 1420
AluI AGCT 7 cut(s) 266, 592, 851, 937, 1138, 1322, 1420
Alw21I GWGCWC 2 cut(s) 939, 1140
Alw26I GTCTC 7 cut(s) 117, 289, 434, 567, 786, 888, 974
AlwI GGATC 5 cut(s) 55, 851, 867, 887, 900
Ama87I CYCGRG 3 cut(s) 145, 488, 1118
AoxI GGCC 4 cut(s) 997, 1017, 1170, 1224
ApeKI GCWGC 5 cut(s) 209, 212, 537, 851, 1268
ApoI RAATTY 2 cut(s) 493, 941
Asp718I GGTACC 1 cut(s) 333
AspLEI GCGC 3 cut(s) 1025, 1284, 1358
AspS9I GGNCC 1 cut(s) 676
AsuHPI GGTGA 2 cut(s) 298, 906
AvaI CYCGRG 3 cut(s) 145, 488, 1118
AvaII GGWCC 1 cut(s) 676
BamHI GGATCC 1 cut(s) 892
BanI GGYRCC 4 cut(s) 333, 788, 959, 1022
BanII GRGCYC 3 cut(s) 821, 939, 1140
BauI CACGAG 2 cut(s) 783, 810
BbsI GAAGAC 2 cut(s) 605, 1341
Bbv12I GWGCWC 2 cut(s) 939, 1140
BbvI GCAGC 5 cut(s) 196, 199, 524, 838, 1255
BccI CCATC 3 cut(s) 456, 779, 1414
BceAI ACGGC 2 cut(s) 895, 973
BciT130I CCWGG 3 cut(s) 843, 1001, 1223
BciVI GTATCC 2 cut(s) 107, 477
BcoDI GTCTC 7 cut(s) 117, 289, 434, 567, 786, 888, 974
BfaI CTAG 2 cut(s) 242, 420
BfmI CTRYAG 1 cut(s) 541
BfoI RGCGCY 2 cut(s) 1026, 1359
BfuAI ACCTGC 1 cut(s) 345
BfuI GTATCC 2 cut(s) 107, 477
BisI GCNGC 7 cut(s) 210, 213, 538, 797, 852, 1005, 1269
BlsI GCNGC 7 cut(s) 211, 214, 539, 798, 853, 1006, 1270
Bme1390I CCNGG 3 cut(s) 843, 1001, 1223
Bme18I GGWCC 1 cut(s) 676
BmeT110I CYCGRG 3 cut(s) 145, 488, 1118
BmgT120I GGNCC 1 cut(s) 676
BmiI GGNNCC 6 cut(s) 335, 677, 790, 894, 961, 1024
BmrFI CCNGG 3 cut(s) 843, 1001, 1223
BmrI ACTGGG 2 cut(s) 274, 984
BmsI GCATC 3 cut(s) 151, 344, 1049
BmuI ACTGGG 2 cut(s) 274, 984
BpiI GAAGAC 2 cut(s) 605, 1341
BpmI CTGGAG 3 cut(s) 141, 458, 572
BpuEI CTTGAG 4 cut(s) 381, 870, 1202, 1400
BsaAI YACGTR 1 cut(s) 1351
BsaHI GRCGYC 2 cut(s) 1007, 1023
BsaI GGTCTC 1 cut(s) 974
BsaJI CCNNGG 3 cut(s) 704, 841, 924
BsaWI WCCGGW 1 cut(s) 44
BsaXI ACNNNNNCTCC 2 cut(s) 317, 347
Bsc4I CCNNNNNNNGG 4 cut(s) 285, 705, 812, 813
Bse118I RCCGGY 1 cut(s) 1019
Bse1I ACTGG 2 cut(s) 280, 979
Bse3DI GCAATG 2 cut(s) 181, 437
BseBI CCWGG 3 cut(s) 843, 1001, 1223
BseDI CCNNGG 3 cut(s) 704, 841, 924
BseGI GGATG 3 cut(s) 467, 625, 1406
BseLI CCNNNNNNNGG 4 cut(s) 285, 705, 812, 813
BseMI GCAATG 2 cut(s) 181, 437
BseMII CTCAG 2 cut(s) 366, 1286
BseNI ACTGG 2 cut(s) 280, 979
BseRI GAGGAG 4 cut(s) 338, 341, 693, 1265
BseXI GCAGC 5 cut(s) 196, 199, 524, 838, 1255
BseYI CCCAGC 1 cut(s) 592
Bsh1236I CGCG 1 cut(s) 1284
BshFI GGCC 4 cut(s) 999, 1019, 1172, 1226
BshNI GGYRCC 4 cut(s) 333, 788, 959, 1022
BsiHKAI GWGCWC 2 cut(s) 939, 1140
BsiHKCI CYCGRG 3 cut(s) 145, 488, 1118
BsiSI CCGG 2 cut(s) 45, 1020
BslFI GGGAC 2 cut(s) 689, 968
BslI CCNNNNNNNGG 4 cut(s) 285, 705, 812, 813
BsmAI GTCTC 7 cut(s) 117, 289, 434, 567, 786, 888, 974
BsmBI CGTCTC 3 cut(s) 117, 786, 888
BsmFI GGGAC 2 cut(s) 689, 968
BsmI GAATGC 1 cut(s) 658
BsnI GGCC 4 cut(s) 999, 1019, 1172, 1226
Bso31I GGTCTC 1 cut(s) 974
BsoBI CYCGRG 3 cut(s) 145, 488, 1118
Bsp1286I GDGCHC 3 cut(s) 821, 939, 1140
Bsp143I GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
BspACI CCGC 9 cut(s) 65, 292, 584, 721, 797, 900, 917, 1004, 1013
BspANI GGCC 4 cut(s) 999, 1019, 1172, 1226
BspCNI CTCAG 2 cut(s) 367, 1285
BspFNI CGCG 1 cut(s) 1284
BspLI GGNNCC 6 cut(s) 335, 677, 790, 894, 961, 1024
BspMI ACCTGC 1 cut(s) 345
BspPI GGATC 5 cut(s) 55, 851, 867, 887, 900
BspQI GCTCTTC 1 cut(s) 870
BspT107I GGYRCC 4 cut(s) 333, 788, 959, 1022
BspTNI GGTCTC 1 cut(s) 974
BsrBI CCGCTC 1 cut(s) 586
BsrDI GCAATG 2 cut(s) 181, 437
BsrFI RCCGGY 1 cut(s) 1019
BsrI ACTGG 2 cut(s) 280, 979
BssAI RCCGGY 1 cut(s) 1019
BssECI CCNNGG 3 cut(s) 704, 841, 924
BssMI GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
BssNI GRCGYC 2 cut(s) 1007, 1023
BssSI CACGAG 2 cut(s) 783, 810
BssT1I CCWWGG 1 cut(s) 924
Bst2BI CACGAG 2 cut(s) 783, 810
Bst2UI CCWGG 3 cut(s) 843, 1001, 1223
Bst6I CTCTTC 4 cut(s) 642, 870, 883, 1242
BstACI GRCGYC 2 cut(s) 1007, 1023
BstBAI YACGTR 1 cut(s) 1351
BstC8I GCNNGC 2 cut(s) 428, 1021
BstDEI CTNAG 5 cut(s) 359, 375, 474, 1228, 1272
BstF5I GGATG 3 cut(s) 467, 625, 1406
BstFNI CGCG 1 cut(s) 1284
BstH2I RGCGCY 2 cut(s) 1026, 1359
BstHHI GCGC 3 cut(s) 1025, 1284, 1358
BstKTI GATC 6 cut(s) 50, 859, 875, 895, 1147, 1390
BstMAI GTCTC 7 cut(s) 117, 289, 434, 567, 786, 888, 974
BstMBI GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
BstMWI GCNNNNNNNGC 6 cut(s) 161, 734, 860, 916, 1010, 1037
BstNI CCWGG 3 cut(s) 843, 1001, 1223
BstNSI RCATGY 2 cut(s) 554, 764
BstSCI CCNGG 3 cut(s) 841, 999, 1221
BstSFI CTRYAG 1 cut(s) 541
BstSNI TACGTA 1 cut(s) 1351
BstUI CGCG 1 cut(s) 1284
BstV1I GCAGC 5 cut(s) 196, 199, 524, 838, 1255
BstV2I GAAGAC 2 cut(s) 605, 1341
BstX2I RGATCY 2 cut(s) 872, 892
BstXI CCANNNNNNTGG 3 cut(s) 931, 1000, 1379
BstYI RGATCY 2 cut(s) 872, 892
BsuI GTATCC 2 cut(s) 107, 477
BsuRI GGCC 4 cut(s) 999, 1019, 1172, 1226
BtgZI GCGATG 1 cut(s) 1031
BtsCI GGATG 3 cut(s) 467, 625, 1406
BtsIMutI CAGTG 1 cut(s) 287
BveI ACCTGC 1 cut(s) 345
Cac8I GCNNGC 2 cut(s) 428, 1021
CfoI GCGC 3 cut(s) 1025, 1284, 1358
Cfr10I RCCGGY 1 cut(s) 1019
Cfr13I GGNCC 1 cut(s) 676
CseI GACGC 1 cut(s) 996
Csp6I GTAC 1 cut(s) 334
CviAII CATG 7 cut(s) 166, 458, 505, 551, 665, 761, 907
CviQI GTAC 1 cut(s) 334
DdeI CTNAG 5 cut(s) 359, 375, 474, 1228, 1272
DinI GGCGCC 1 cut(s) 1024
DpnI GATC 6 cut(s) 49, 858, 874, 894, 1146, 1389
DpnII GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
DraI TTTAAA 1 cut(s) 1126
EaeI YGGCCR 1 cut(s) 1017
Eam1104I CTCTTC 4 cut(s) 642, 870, 883, 1242
EarI CTCTTC 4 cut(s) 642, 870, 883, 1242
Ecl136II GAGCTC 2 cut(s) 937, 1138
Eco105I TACGTA 1 cut(s) 1351
Eco130I CCWWGG 1 cut(s) 924
Eco24I GRGCYC 3 cut(s) 821, 939, 1140
Eco31I GGTCTC 1 cut(s) 974
Eco47I GGWCC 1 cut(s) 676
Eco53kI GAGCTC 2 cut(s) 937, 1138
Eco57I CTGAAG 4 cut(s) 177, 851, 1232, 1350
Eco88I CYCGRG 3 cut(s) 145, 488, 1118
EcoICRI GAGCTC 2 cut(s) 937, 1138
EcoO109I RGGNCCY 1 cut(s) 676
EcoRII CCWGG 3 cut(s) 841, 999, 1221
EcoT14I CCWWGG 1 cut(s) 924
EcoT22I ATGCAT 1 cut(s) 171
EcoT38I GRGCYC 3 cut(s) 821, 939, 1140
EgeI GGCGCC 1 cut(s) 1024
EheI GGCGCC 1 cut(s) 1024
ErhI CCWWGG 1 cut(s) 924
Esp3I CGTCTC 3 cut(s) 117, 786, 888
FaeI CATG 7 cut(s) 169, 461, 508, 554, 668, 764, 910
FaqI GGGAC 2 cut(s) 689, 968
FatI CATG 7 cut(s) 165, 457, 504, 550, 664, 760, 906
Fnu4HI GCNGC 7 cut(s) 210, 213, 538, 797, 852, 1005, 1269
FokI GGATG 3 cut(s) 474, 632, 1393
FriOI GRGCYC 3 cut(s) 821, 939, 1140
Fsp4HI GCNGC 7 cut(s) 210, 213, 538, 797, 852, 1005, 1269
FspBI CTAG 2 cut(s) 242, 420
GlaI GCGC 3 cut(s) 1024, 1283, 1357
GluI GCNGC 7 cut(s) 210, 213, 538, 797, 852, 1005, 1269
GsaI CCCAGC 1 cut(s) 596
GsuI CTGGAG 3 cut(s) 141, 458, 572
HaeII RGCGCY 2 cut(s) 1026, 1359
HaeIII GGCC 4 cut(s) 999, 1019, 1172, 1226
HapII CCGG 2 cut(s) 45, 1020
HgaI GACGC 1 cut(s) 996
HhaI GCGC 3 cut(s) 1025, 1284, 1358
Hin1I GRCGYC 2 cut(s) 1007, 1023
Hin1II CATG 7 cut(s) 169, 461, 508, 554, 668, 764, 910
Hin6I GCGC 3 cut(s) 1023, 1282, 1356
HinP1I GCGC 3 cut(s) 1023, 1282, 1356
HincII GTYRAC 1 cut(s) 1290
HindII GTYRAC 1 cut(s) 1290
HinfI GANTC 9 cut(s) 103, 148, 297, 377, 442, 556, 776, 1108, 1315
HpaII CCGG 2 cut(s) 45, 1020
HphI GGTGA 2 cut(s) 298, 906
Hpy166II GTNNAC 4 cut(s) 229, 480, 1115, 1290
Hpy8I GTNNAC 4 cut(s) 229, 480, 1115, 1290
Hpy99I CGWCG 2 cut(s) 1012, 1145
HpyAV CCTTC 5 cut(s) 62, 319, 422, 531, 718
HpyCH4IV ACGT 2 cut(s) 126, 1350
HpyCH4V TGCA 9 cut(s) 169, 194, 215, 340, 430, 658, 760, 1057, 1075
HpyF10VI GCNNNNNNNGC 6 cut(s) 161, 734, 860, 916, 1010, 1037
HpyF3I CTNAG 5 cut(s) 359, 375, 474, 1228, 1272
HpySE526I ACGT 2 cut(s) 126, 1350
Hsp92I GRCGYC 2 cut(s) 1007, 1023
Hsp92II CATG 7 cut(s) 169, 461, 508, 554, 668, 764, 910
HspAI GCGC 3 cut(s) 1023, 1282, 1356
KasI GGCGCC 1 cut(s) 1022
KpnI GGTACC 1 cut(s) 337
KroI GCCGGC 1 cut(s) 1019
KroNI GCCGGC 1 cut(s) 1021
Kzo9I GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 3 cut(s) 591, 742, 934
Lsp1109I GCAGC 5 cut(s) 196, 199, 524, 838, 1255
LweI GCATC 3 cut(s) 151, 344, 1049
MaeI CTAG 2 cut(s) 242, 420
MaeII ACGT 2 cut(s) 126, 1350
MaeIII GTNAC 4 cut(s) 81, 149, 912, 1231
MalI GATC 6 cut(s) 49, 858, 874, 894, 1146, 1389
MbiI CCGCTC 1 cut(s) 586
MboI GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
MflI RGATCY 2 cut(s) 872, 892
MhlI GDGCHC 3 cut(s) 821, 939, 1140
MluCI AATT 4 cut(s) 493, 710, 941, 1166
Mly113I GGCGCC 1 cut(s) 1023
MlyI GAGTC 6 cut(s) 112, 157, 291, 386, 436, 770
MmeI TCCRAC 4 cut(s) 86, 266, 920, 1327
Mph1103I ATGCAT 1 cut(s) 171
MroNI GCCGGC 1 cut(s) 1019
MseI TTAA 2 cut(s) 971, 1125
MslI CAYNNNNRTG 3 cut(s) 224, 663, 1377
MspA1I CMGCKG 1 cut(s) 592
MspI CCGG 2 cut(s) 45, 1020
MspR9I CCNGG 3 cut(s) 843, 1001, 1223
Mva1269I GAATGC 1 cut(s) 658
MvaI CCWGG 3 cut(s) 843, 1001, 1223
MvnI CGCG 1 cut(s) 1284
MwoI GCNNNNNNNGC 6 cut(s) 161, 734, 860, 916, 1010, 1037
NaeI GCCGGC 1 cut(s) 1021
NarI GGCGCC 1 cut(s) 1023
NdeII GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
NgoMIV GCCGGC 1 cut(s) 1019
NlaIII CATG 7 cut(s) 169, 461, 508, 554, 668, 764, 910
NlaIV GGNNCC 6 cut(s) 335, 677, 790, 894, 961, 1024
NmuCI GTSAC 2 cut(s) 149, 912
NsiI ATGCAT 1 cut(s) 171
NspI RCATGY 2 cut(s) 554, 764
PaeR7I CTCGAG 2 cut(s) 488, 1118
PciSI GCTCTTC 1 cut(s) 870
PctI GAATGC 1 cut(s) 658
PdiI GCCGGC 1 cut(s) 1021
PfeI GAWTC 3 cut(s) 556, 1108, 1315
PkrI GCNGC 7 cut(s) 211, 214, 539, 798, 853, 1006, 1270
PleI GAGTC 6 cut(s) 111, 156, 291, 385, 436, 770
PluTI GGCGCC 1 cut(s) 1026
PpsI GAGTC 6 cut(s) 111, 156, 291, 385, 436, 770
Ppu21I YACGTR 1 cut(s) 1351
PpuMI RGGWCCY 1 cut(s) 676
PsiI TTATAA 1 cut(s) 387
Psp124BI GAGCTC 2 cut(s) 939, 1140
Psp5II RGGWCCY 1 cut(s) 676
Psp6I CCWGG 3 cut(s) 841, 999, 1221
PspFI CCCAGC 1 cut(s) 592
PspGI CCWGG 3 cut(s) 841, 999, 1221
PspN4I GGNNCC 6 cut(s) 335, 677, 790, 894, 961, 1024
PspPI GGNCC 1 cut(s) 676
PspPPI RGGWCCY 1 cut(s) 676
PspXI VCTCGAGB 1 cut(s) 1118
PsuI RGATCY 2 cut(s) 872, 892
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 1 cut(s) 335
RsaNI GTAC 1 cut(s) 334
RseI CAYNNNNRTG 3 cut(s) 224, 663, 1377
SacI GAGCTC 2 cut(s) 939, 1140
SapI GCTCTTC 1 cut(s) 870
SaqAI TTAA 2 cut(s) 971, 1125
SatI GCNGC 7 cut(s) 210, 213, 538, 797, 852, 1005, 1269
Sau3AI GATC 6 cut(s) 47, 856, 872, 892, 1144, 1387
Sau96I GGNCC 1 cut(s) 676
SchI GAGTC 6 cut(s) 112, 157, 291, 386, 436, 770
ScrFI CCNGG 3 cut(s) 843, 1001, 1223
SduI GDGCHC 3 cut(s) 821, 939, 1140
SfaNI GCATC 3 cut(s) 151, 344, 1049
SfcI CTRYAG 1 cut(s) 541
SfoI GGCGCC 1 cut(s) 1024
Sfr274I CTCGAG 2 cut(s) 488, 1118
SinI GGWCC 1 cut(s) 676
SlaI CTCGAG 2 cut(s) 488, 1118
SmiMI CAYNNNNRTG 3 cut(s) 224, 663, 1377
SmlI CTYRAG 6 cut(s) 396, 488, 885, 1118, 1181, 1415
SmoI CTYRAG 6 cut(s) 396, 488, 885, 1118, 1181, 1415
SnaBI TACGTA 1 cut(s) 1351
Sse9I AATT 4 cut(s) 493, 710, 941, 1166
SsiI CCGC 9 cut(s) 65, 292, 584, 721, 797, 900, 917, 1004, 1013
SspDI GGCGCC 1 cut(s) 1022
SspMI CTAG 2 cut(s) 242, 420
SstI GAGCTC 2 cut(s) 939, 1140
StyD4I CCNGG 3 cut(s) 841, 999, 1221
StyI CCWWGG 1 cut(s) 924
TaiI ACGT 2 cut(s) 129, 1353
TaqI TCGA 8 cut(s) 50, 408, 489, 774, 1119, 1140, 1237, 1368
TasI AATT 4 cut(s) 493, 710, 941, 1166
TauI GCSGC 2 cut(s) 799, 1007
TfiI GAWTC 3 cut(s) 556, 1108, 1315
Tru1I TTAA 2 cut(s) 971, 1125
Tru9I TTAA 2 cut(s) 971, 1125
TscAI CASTG 1 cut(s) 287
TseFI GTSAC 2 cut(s) 149, 912
TseI GCWGC 5 cut(s) 209, 212, 537, 851, 1268
Tsp45I GTSAC 2 cut(s) 149, 912
TspDTI ATGAA 3 cut(s) 69, 895, 1292
TspGWI ACGGA 1 cut(s) 626
TspRI CASTG 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 676
XapI RAATTY 2 cut(s) 493, 941
XbaI TCTAGA 1 cut(s) 241
XceI RCATGY 2 cut(s) 554, 764
XhoI CTCGAG 2 cut(s) 488, 1118
XspI CTAG 2 cut(s) 242, 420
Zsp2I ATGCAT 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.