Rmu_sc0007953.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007953.1
OG0000480
Physical Location & Seq
Reverse (-)
8416 .. 12456
4041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007953.1_g000003.1.cds

Sequence Viewer

Length: 1713 bp
atgaccattcacggatccgtactatccattcaccatgcctatctctcaccagcgcctattcctctcccaaagccccaaattattcacccaaaacaacgccacacttctcttccacctcgggatcgaacccctctccaacctaaccctccacaccccttcctcggcatcatagagccccaccgttacgccttcctcacagtcaaaccaccaccaccccaattaggtccgtccccttgtaccttcatggcccgaattaaaactaccgacttaacgaagagtcaaaggacgaacacagaatcaactactgaacctacaccttggcagctagaaaatcatgtcctggagaaatatgccgaggcattctccatgctgcctggagttaagatttcagcggtccctgtggatgcggacatctacactggtagaaacatccctgaagatgccttgatattggaccccgaggctggcaaggggaagtttcactgggtttatccgactttctctatctctataactgctccaggggctctgatgattaccggcagttggcgctctctcgaattggacctccttcctccaagggctttcgcggatgatcttggtaatggtggggagttgagttgttgtgaaagaggttgggggtccaaggacgaccctgaaggtgatgacacttatgagggaaggtcgctcctcgttgtgagggagctccctcaaatgattcctccacctcggaagaagcaaaaggttgcggagccctctgctaatgacgacccatctcgtgctccgcctactcaactagctccgcattcttcttcatgtggaggtttgccttccttgacatctttgagggatattactactgacgttgctccctcgagccggagagtccttagagtccaacggtttggcggcatcagccaatgccggcgccttggcgtcatcgaacccgagatctggcttttatggtgtatcatcatttttttgcgcaatcttgacgctcttcattccaggcaacaacaacgccttgagaaggctgaccaagagctaaaatccaaggataaggaactaaacgaccaaatggggtcaatgacgcaactgagcctcatcctcgaggagttctatcgtgagatagtgaagttaaaaaatgatttggctatggtaactcgaagtaaggacgagaagttcaaaaagggggtcgctaaaatgaagcgcgtgttcgccaaacattttcgactcagatggaaccaggctttgactaaggaggatgatagatgctacgtagggcctgacgcatttgatcacttttatgggtttgccgccagggactattctcccattcgtggtctgctaccaggggatgctcattcgtcggcgttgagaggattcgctgatttcgacactcgccagttccttgaagatgtgccgaactattctgacgatgtcgaggccagtattcctcgagcctcgagggctcgtgtaggtcctagtcgccctagtcttcgaagcatgagtgctgacaggggaacaagtcccgaatctcatcgcctccgaactctaagagaagaatccttcgtgttgcaggactcgctcgagcatgccttgttggaagtccgcaatctgaaggtagaggtccacaacttgtcagtggagcttcaacgctcgagggaccatgcggagtgtctaaaagtagagctccgcgaatgttaccgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

570

Amino Acids

64.31

Weight (kDa)

8.27

Isoelectric Point (pI)

55.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000480)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g04502
rosa_chinensis RchiOBHm_Chr2g0159401 RchiOBHm_Chr6g0254061
rosa_laevigata RLG00000014946 RLG00000035644 RLG00000035648
rosa_multiflora Rmu_co7989044.1_g000001 Rmu_co8071304.1_g000001 Rmu_co8335039.1_g000001 Rmu_co8433837.1_g000001 Rmu_co8463157.1_g000003 Rmu_co8495873.1_g000001 Rmu_sc0000030.1_g000034 Rmu_sc0000335.1_g000030 Rmu_sc0000386.1_g000004 Rmu_sc0000419.1_g000026 Rmu_sc0000536.1_g000025 Rmu_sc0000693.1_g000045 Rmu_sc0000950.1_g000029 Rmu_sc0000950.1_g000030 Rmu_sc0001524.1_g000001 Rmu_sc0001524.1_g000002 Rmu_sc0001716.1_g000027 Rmu_sc0001744.1_g000019 Rmu_sc0002162.1_g000032 Rmu_sc0002300.1_g000003 Rmu_sc0002341.1_g000002 Rmu_sc0002480.1_g000026 Rmu_sc0002759.1_g000071 Rmu_sc0002837.1_g000002 Rmu_sc0002837.1_g000003 Rmu_sc0002986.1_g000030 Rmu_sc0002986.1_g000031 Rmu_sc0003553.1_g000001 Rmu_sc0004192.1_g000015 Rmu_sc0004322.1_g000020 Rmu_sc0004755.1_g000032 Rmu_sc0004755.1_g000034 Rmu_sc0005163.1_g000005 Rmu_sc0005507.1_g000023 Rmu_sc0005599.1_g000013 Rmu_sc0005599.1_g000014 Rmu_sc0005599.1_g000015 Rmu_sc0005947.1_g000011 Rmu_sc0006031.1_g000027 Rmu_sc0006287.1_g000035 Rmu_sc0006318.1_g000009 Rmu_sc0007355.1_g000006 Rmu_sc0007355.1_g000007 Rmu_sc0007646.1_g000003 Rmu_sc0007953.1_g000003 Rmu_sc0008084.1_g000003 Rmu_sc0009135.1_g000005 Rmu_sc0009656.1_g000001 Rmu_sc0010871.1_g000011 Rmu_sc0010871.1_g000012 Rmu_sc0011938.1_g000002 Rmu_sc0013472.1_g000004 Rmu_sc0014143.1_g000001 Rmu_sc0015550.1_g000001 Rmu_sc0015855.1_g000002 Rmu_sc0017748.1_g000001 Rmu_sc0031144.1_g000001 Rmu_sc0032350.1_g000002 Rmu_sc0036344.1_g000003 Rmu_ssc0000042.1_g000002 Rmu_ssc0000255.1_g000043
rosa_roxburghii Rroxscaffold_1G00012780 Rroxscaffold_1G00031520 Rroxscaffold_1G00044950 Rroxscaffold_1G00044960 Rroxscaffold_2G00117760 Rroxscaffold_3G00224840 Rroxscaffold_3G00225760 Rroxscaffold_3G00235510 Rroxscaffold_3G00265420 Rroxscaffold_4G00315210 Rroxscaffold_4G00322430 Rroxscaffold_7G00165660 Rroxscaffold_7G00195200 Rroxscaffold_7G00211270
rosa_rugosa Rorug05G0252000 Rorug05G0548900
rosa_samantha Rh6AG065700 Rh6BG058500 Rh6CG058900 Rh6DG055700 Rh7DG180100
rosa_wichuraiana Rw6G005780 Rw6G033910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 2 cut(s) 1109, 1465
Acc16I TGCGCA 1 cut(s) 986
AccB1I GGYRCC 1 cut(s) 927
AccII CGCG 3 cut(s) 590, 1212, 1698
AclWI GGATC 3 cut(s) 9, 22, 129
AcuI CTGAAG 3 cut(s) 456, 678, 1640
AcyI GRCGYC 2 cut(s) 928, 936
AfaI GTAC 2 cut(s) 21, 238
AfiI CCNNNNNNNGG 8 cut(s) 161, 221, 464, 546, 879, 954, 1030, 1340
AgsI TTSAA 3 cut(s) 1186, 1415, 1655
AjnI CCWGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
AloI GAACNNNNNNTCC 2 cut(s) 1166, 1198
AluBI AGCT 6 cut(s) 325, 706, 800, 1045, 1651, 1693
AluI AGCT 6 cut(s) 325, 706, 800, 1045, 1651, 1693
Alw21I GWGCWC 3 cut(s) 708, 784, 1695
AlwI GGATC 3 cut(s) 9, 22, 129
Ama87I CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
AoxI GGCC 3 cut(s) 246, 1283, 1446
ApeKI GCWGC 2 cut(s) 322, 370
ArsI GACNNNNNNTTYG 2 cut(s) 1179, 1211
AspLEI GCGC 5 cut(s) 55, 552, 930, 987, 1212
AsuHPI GGTGA 4 cut(s) 23, 39, 77, 674
AsuII TTCGAA 1 cut(s) 1501
AvaI CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
AvaII GGWCC 8 cut(s) 224, 394, 454, 565, 642, 1481, 1630, 1666
BamHI GGATCC 1 cut(s) 14
BanI GGYRCC 1 cut(s) 927
BanII GRGCYC 6 cut(s) 177, 529, 708, 756, 1474, 1695
BauI CACGAG 2 cut(s) 777, 1473
BbsI GAAGAC 1 cut(s) 1490
Bbv12I GWGCWC 3 cut(s) 708, 784, 1695
BbvI GCAGC 2 cut(s) 334, 357
BccI CCATC 2 cut(s) 781, 1233
BciT130I CCWGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
BclI TGATCA 1 cut(s) 1297
BfaI CTAG 4 cut(s) 326, 797, 1485, 1494
BfoI RGCGCY 3 cut(s) 56, 553, 931
BglI GCCNNNNNGGC 1 cut(s) 1469
BglII AGATCT 1 cut(s) 951
BisI GCNGC 4 cut(s) 323, 371, 910, 1317
BlsI GCNGC 4 cut(s) 324, 372, 911, 1318
Bme1390I CCNGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
Bme18I GGWCC 8 cut(s) 224, 394, 454, 565, 642, 1481, 1630, 1666
BmeT110I CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
BmiI GGNNCC 8 cut(s) 16, 396, 456, 643, 753, 929, 1244, 1667
BmrFI CCNGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
BmrI ACTGGG 1 cut(s) 493
BmsI GCATC 6 cut(s) 174, 394, 430, 921, 1262, 1348
BmuI ACTGGG 1 cut(s) 493
BpiI GAAGAC 1 cut(s) 1490
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 3 cut(s) 362, 396, 504
Bpu14I TTCGAA 1 cut(s) 1501
BpuEI CTTGAG 1 cut(s) 1046
BsaAI YACGTR 1 cut(s) 1279
BsaHI GRCGYC 2 cut(s) 928, 936
Bsc4I CCNNNNNNNGG 8 cut(s) 161, 221, 464, 546, 879, 954, 1030, 1340
Bse118I RCCGGY 2 cut(s) 539, 924
Bse1I ACTGG 4 cut(s) 424, 488, 1405, 1449
BseBI CCWGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
BseGI GGATG 6 cut(s) 409, 429, 598, 1104, 1270, 1363
BseLI CCNNNNNNNGG 8 cut(s) 161, 221, 464, 546, 879, 954, 1030, 1340
BseMII CTCAG 2 cut(s) 1088, 1249
BseNI ACTGG 4 cut(s) 424, 488, 1405, 1449
BseRI GAGGAG 2 cut(s) 680, 1127
BseXI GCAGC 2 cut(s) 334, 357
Bsh1236I CGCG 3 cut(s) 590, 1212, 1698
BshFI GGCC 3 cut(s) 248, 1285, 1448
BshNI GGYRCC 1 cut(s) 927
BsiHKAI GWGCWC 3 cut(s) 708, 784, 1695
BsiHKCI CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
BsiSI CCGG 3 cut(s) 540, 880, 925
BslFI GGGAC 5 cut(s) 214, 380, 1337, 1515, 1679
BslI CCNNNNNNNGG 8 cut(s) 161, 221, 464, 546, 879, 954, 1030, 1340
BsmFI GGGAC 5 cut(s) 214, 380, 1337, 1515, 1679
BsmI GAATGC 2 cut(s) 359, 805
BsnI GGCC 3 cut(s) 248, 1285, 1448
BsoBI CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
Bsp119I TTCGAA 1 cut(s) 1501
Bsp1286I GDGCHC 7 cut(s) 177, 529, 708, 756, 784, 1474, 1695
Bsp143I GATC 5 cut(s) 14, 121, 595, 951, 1297
BspANI GGCC 3 cut(s) 248, 1285, 1448
BspCNI CTCAG 2 cut(s) 1089, 1248
BspFNI CGCG 3 cut(s) 590, 1212, 1698
BspLI GGNNCC 8 cut(s) 16, 396, 456, 643, 753, 929, 1244, 1667
BspPI GGATC 3 cut(s) 9, 22, 129
BspQI GCTCTTC 1 cut(s) 1005
BspT104I TTCGAA 1 cut(s) 1501
BspT107I GGYRCC 1 cut(s) 927
BsrFI RCCGGY 2 cut(s) 539, 924
BsrI ACTGG 4 cut(s) 424, 488, 1405, 1449
BssAI RCCGGY 2 cut(s) 539, 924
BssMI GATC 5 cut(s) 14, 121, 595, 951, 1297
BssNI GRCGYC 2 cut(s) 928, 936
BssSI CACGAG 2 cut(s) 777, 1473
BssT1I CCWWGG 5 cut(s) 317, 578, 645, 931, 1053
Bst2BI CACGAG 2 cut(s) 777, 1473
Bst2UI CCWGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
Bst4CI ACNGT 3 cut(s) 182, 199, 903
Bst6I CTCTTC 3 cut(s) 114, 269, 1005
BstACI GRCGYC 2 cut(s) 928, 936
BstBAI YACGTR 1 cut(s) 1279
BstBI TTCGAA 1 cut(s) 1501
BstC8I GCNNGC 3 cut(s) 466, 926, 1596
BstDEI CTNAG 5 cut(s) 890, 1097, 1235, 1257, 1556
BstENI CCTNNNNNAGG 1 cut(s) 1028
BstF5I GGATG 6 cut(s) 409, 429, 598, 1104, 1270, 1363
BstFNI CGCG 3 cut(s) 590, 1212, 1698
BstH2I RGCGCY 3 cut(s) 56, 553, 931
BstHHI GCGC 5 cut(s) 55, 552, 930, 987, 1212
BstKTI GATC 5 cut(s) 17, 124, 598, 954, 1300
BstMBI GATC 5 cut(s) 14, 121, 595, 951, 1297
BstMWI GCNNNNNNNGC 5 cut(s) 524, 549, 915, 1469, 1585
BstNI CCWGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
BstNSI RCATGY 1 cut(s) 1598
BstSCI CCNGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
BstSNI TACGTA 1 cut(s) 1279
BstUI CGCG 3 cut(s) 590, 1212, 1698
BstV1I GCAGC 2 cut(s) 334, 357
BstV2I GAAGAC 1 cut(s) 1490
BstX2I RGATCY 2 cut(s) 14, 951
BstXI CCANNNNNNTGG 1 cut(s) 905
BstYI RGATCY 2 cut(s) 14, 951
BsuRI GGCC 3 cut(s) 248, 1285, 1448
BtgZI GCGATG 1 cut(s) 1526
BtsCI GGATG 6 cut(s) 409, 429, 598, 1104, 1270, 1363
BtsIMutI CAGTG 3 cut(s) 417, 481, 1650
Cac8I GCNNGC 3 cut(s) 466, 926, 1596
CfoI GCGC 5 cut(s) 55, 552, 930, 987, 1212
Cfr10I RCCGGY 2 cut(s) 539, 924
CseI GACGC 4 cut(s) 925, 1004, 1099, 1298
Csp6I GTAC 2 cut(s) 20, 237
CviAII CATG 8 cut(s) 35, 244, 335, 367, 816, 1507, 1595, 1670
CviQI GTAC 2 cut(s) 20, 237
DdeI CTNAG 5 cut(s) 890, 1097, 1235, 1257, 1556
DinI GGCGCC 1 cut(s) 929
DpnI GATC 5 cut(s) 16, 123, 597, 953, 1299
DpnII GATC 5 cut(s) 14, 121, 595, 951, 1297
Eam1104I CTCTTC 3 cut(s) 114, 269, 1005
EarI CTCTTC 3 cut(s) 114, 269, 1005
EciI GGCGGA 1 cut(s) 774
Ecl136II GAGCTC 2 cut(s) 706, 1693
Eco105I TACGTA 1 cut(s) 1279
Eco130I CCWWGG 5 cut(s) 317, 578, 645, 931, 1053
Eco24I GRGCYC 6 cut(s) 177, 529, 708, 756, 1474, 1695
Eco47I GGWCC 8 cut(s) 224, 394, 454, 565, 642, 1481, 1630, 1666
Eco53kI GAGCTC 2 cut(s) 706, 1693
Eco57I CTGAAG 3 cut(s) 456, 678, 1640
Eco88I CYCGRG 9 cut(s) 117, 458, 874, 947, 1109, 1458, 1465, 1589, 1660
EcoICRI GAGCTC 2 cut(s) 706, 1693
EcoNI CCTNNNNNAGG 1 cut(s) 1028
EcoO109I RGGNCCY 2 cut(s) 1283, 1481
EcoRII CCWGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
EcoT14I CCWWGG 5 cut(s) 317, 578, 645, 931, 1053
EcoT38I GRGCYC 6 cut(s) 177, 529, 708, 756, 1474, 1695
EgeI GGCGCC 1 cut(s) 929
EheI GGCGCC 1 cut(s) 929
ErhI CCWWGG 5 cut(s) 317, 578, 645, 931, 1053
FaeI CATG 8 cut(s) 38, 247, 338, 370, 819, 1510, 1598, 1673
FaqI GGGAC 5 cut(s) 214, 380, 1337, 1515, 1679
FatI CATG 8 cut(s) 34, 243, 334, 366, 815, 1506, 1594, 1669
FbaI TGATCA 1 cut(s) 1297
Fnu4HI GCNGC 4 cut(s) 323, 371, 910, 1317
FokI GGATG 6 cut(s) 416, 416, 605, 1091, 1277, 1370
FriOI GRGCYC 6 cut(s) 177, 529, 708, 756, 1474, 1695
Fsp4HI GCNGC 4 cut(s) 323, 371, 910, 1317
FspBI CTAG 4 cut(s) 326, 797, 1485, 1494
FspI TGCGCA 1 cut(s) 986
GlaI GCGC 5 cut(s) 54, 551, 929, 986, 1211
GluI GCNGC 4 cut(s) 323, 371, 910, 1317
GsuI CTGGAG 3 cut(s) 362, 396, 504
HaeII RGCGCY 3 cut(s) 56, 553, 931
HaeIII GGCC 3 cut(s) 248, 1285, 1448
HapII CCGG 3 cut(s) 540, 880, 925
HgaI GACGC 4 cut(s) 925, 1004, 1099, 1298
HhaI GCGC 5 cut(s) 55, 552, 930, 987, 1212
Hin1I GRCGYC 2 cut(s) 928, 936
Hin1II CATG 8 cut(s) 38, 247, 338, 370, 819, 1510, 1598, 1673
Hin6I GCGC 5 cut(s) 53, 550, 928, 985, 1210
HinP1I GCGC 5 cut(s) 53, 550, 928, 985, 1210
HpaII CCGG 3 cut(s) 540, 880, 925
HphI GGTGA 4 cut(s) 23, 39, 77, 674
Hpy166II GTNNAC 1 cut(s) 1633
Hpy188I TCNGA 7 cut(s) 495, 531, 732, 1238, 1435, 1550, 1620
Hpy188III TCNNGA 5 cut(s) 119, 557, 992, 1124, 1532
Hpy8I GTNNAC 1 cut(s) 1633
Hpy99I CGWCG 1 cut(s) 1372
HpyCH4III ACNGT 3 cut(s) 182, 199, 903
HpyCH4IV ACGT 2 cut(s) 864, 1278
HpyCH4V TGCA 1 cut(s) 1579
HpyF10VI GCNNNNNNNGC 5 cut(s) 524, 549, 915, 1469, 1585
HpyF3I CTNAG 5 cut(s) 890, 1097, 1235, 1257, 1556
HpySE526I ACGT 2 cut(s) 864, 1278
Hsp92I GRCGYC 2 cut(s) 928, 936
Hsp92II CATG 8 cut(s) 38, 247, 338, 370, 819, 1510, 1598, 1673
HspAI GCGC 5 cut(s) 53, 550, 928, 985, 1210
KasI GGCGCC 1 cut(s) 927
KroI GCCGGC 1 cut(s) 924
KroNI GCCGGC 1 cut(s) 926
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 5 cut(s) 14, 121, 595, 951, 1297
LguI GCTCTTC 1 cut(s) 1005
Lsp1109I GCAGC 2 cut(s) 334, 357
LweI GCATC 6 cut(s) 174, 394, 430, 921, 1262, 1348
MaeI CTAG 4 cut(s) 326, 797, 1485, 1494
MaeII ACGT 2 cut(s) 864, 1278
MaeIII GTNAC 3 cut(s) 182, 1159, 1703
MalI GATC 5 cut(s) 16, 123, 597, 953, 1299
MboI GATC 5 cut(s) 14, 121, 595, 951, 1297
MflI RGATCY 2 cut(s) 14, 951
MhlI GDGCHC 7 cut(s) 177, 529, 708, 756, 784, 1474, 1695
MluCI AATT 4 cut(s) 78, 218, 252, 560
Mly113I GGCGCC 1 cut(s) 928
MlyI GAGTC 5 cut(s) 286, 894, 903, 1227, 1577
MmeI TCCRAC 4 cut(s) 160, 518, 922, 1584
MroNI GCCGGC 1 cut(s) 924
MseI TTAA 4 cut(s) 255, 269, 381, 1139
MslI CAYNNNNRTG 1 cut(s) 1305
MspA1I CMGCKG 1 cut(s) 392
MspI CCGG 3 cut(s) 540, 880, 925
MspR9I CCNGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
Mva1269I GAATGC 2 cut(s) 359, 805
MvaI CCWGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
MvnI CGCG 3 cut(s) 590, 1212, 1698
MwoI GCNNNNNNNGC 5 cut(s) 524, 549, 915, 1469, 1585
NaeI GCCGGC 1 cut(s) 926
NarI GGCGCC 1 cut(s) 928
NdeII GATC 5 cut(s) 14, 121, 595, 951, 1297
NgoMIV GCCGGC 1 cut(s) 924
NlaIII CATG 8 cut(s) 38, 247, 338, 370, 819, 1510, 1598, 1673
NlaIV GGNNCC 8 cut(s) 16, 396, 456, 643, 753, 929, 1244, 1667
NmeAIII GCCGAG 2 cut(s) 141, 379
NsbI TGCGCA 1 cut(s) 986
NspI RCATGY 1 cut(s) 1598
NspV TTCGAA 1 cut(s) 1501
PaeI GCATGC 1 cut(s) 1598
PaeR7I CTCGAG 6 cut(s) 874, 1109, 1458, 1465, 1589, 1660
PciSI GCTCTTC 1 cut(s) 1005
PcsI WCGNNNNNNNCGW 1 cut(s) 1392
PctI GAATGC 2 cut(s) 359, 805
PdiI GCCGGC 1 cut(s) 926
PfeI GAWTC 5 cut(s) 296, 718, 1383, 1535, 1565
PflFI GACNNNGTC 1 cut(s) 1439
PfoI TCCNGGA 1 cut(s) 339
PkrI GCNGC 4 cut(s) 324, 372, 911, 1318
PleI GAGTC 5 cut(s) 285, 893, 902, 1227, 1577
PluTI GGCGCC 1 cut(s) 931
PpsI GAGTC 5 cut(s) 285, 893, 902, 1227, 1577
Ppu21I YACGTR 1 cut(s) 1279
PpuMI RGGWCCY 1 cut(s) 1481
Psp124BI GAGCTC 2 cut(s) 708, 1695
Psp5II RGGWCCY 1 cut(s) 1481
Psp6I CCWGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
PspGI CCWGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
PspN4I GGNNCC 8 cut(s) 16, 396, 456, 643, 753, 929, 1244, 1667
PspPPI RGGWCCY 1 cut(s) 1481
PspXI VCTCGAGB 6 cut(s) 874, 1109, 1458, 1465, 1589, 1660
PsuI RGATCY 2 cut(s) 14, 951
PsyI GACNNNGTC 1 cut(s) 1439
RsaI GTAC 2 cut(s) 21, 238
RsaNI GTAC 2 cut(s) 20, 237
RseI CAYNNNNRTG 1 cut(s) 1305
SacI GAGCTC 2 cut(s) 708, 1695
SapI GCTCTTC 1 cut(s) 1005
SaqAI TTAA 4 cut(s) 255, 269, 381, 1139
SatI GCNGC 4 cut(s) 323, 371, 910, 1317
Sau3AI GATC 5 cut(s) 14, 121, 595, 951, 1297
SchI GAGTC 5 cut(s) 286, 894, 903, 1227, 1577
ScrFI CCNGG 7 cut(s) 341, 375, 522, 1009, 1247, 1321, 1353
SduI GDGCHC 7 cut(s) 177, 529, 708, 756, 784, 1474, 1695
SfaNI GCATC 6 cut(s) 174, 394, 430, 921, 1262, 1348
SfoI GGCGCC 1 cut(s) 929
Sfr274I CTCGAG 6 cut(s) 874, 1109, 1458, 1465, 1589, 1660
SfuI TTCGAA 1 cut(s) 1501
SinI GGWCC 8 cut(s) 224, 394, 454, 565, 642, 1481, 1630, 1666
SlaI CTCGAG 6 cut(s) 874, 1109, 1458, 1465, 1589, 1660
SmiMI CAYNNNNRTG 1 cut(s) 1305
SmlI CTYRAG 7 cut(s) 874, 1025, 1109, 1458, 1465, 1589, 1660
SmoI CTYRAG 7 cut(s) 874, 1025, 1109, 1458, 1465, 1589, 1660
SnaBI TACGTA 1 cut(s) 1279
SphI GCATGC 1 cut(s) 1598
Sse9I AATT 4 cut(s) 78, 218, 252, 560
SspDI GGCGCC 1 cut(s) 927
SspMI CTAG 4 cut(s) 326, 797, 1485, 1494
SstI GAGCTC 2 cut(s) 708, 1695
StyD4I CCNGG 7 cut(s) 339, 373, 520, 1007, 1245, 1319, 1351
StyI CCWWGG 5 cut(s) 317, 578, 645, 931, 1053
TaaI ACNGT 3 cut(s) 182, 199, 903
TaiI ACGT 2 cut(s) 867, 1281
TasI AATT 4 cut(s) 78, 218, 252, 560
TauI GCSGC 2 cut(s) 912, 1319
TfiI GAWTC 5 cut(s) 296, 718, 1383, 1535, 1565
Tru1I TTAA 4 cut(s) 255, 269, 381, 1139
Tru9I TTAA 4 cut(s) 255, 269, 381, 1139
TscAI CASTG 3 cut(s) 424, 488, 1650
TseI GCWGC 2 cut(s) 322, 370
TspDTI ATGAA 4 cut(s) 232, 804, 992, 1220
TspGWI ACGGA 3 cut(s) 7, 27, 216
TspRI CASTG 3 cut(s) 424, 488, 1650
Tth111I GACNNNGTC 1 cut(s) 1439
VpaK11BI GGWCC 8 cut(s) 224, 394, 454, 565, 642, 1481, 1630, 1666
XagI CCTNNNNNAGG 1 cut(s) 1028
XceI RCATGY 1 cut(s) 1598
XhoI CTCGAG 6 cut(s) 874, 1109, 1458, 1465, 1589, 1660
XspI CTAG 4 cut(s) 326, 797, 1485, 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.