FvH4_4g24053

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
26329830 .. 26332067
2238 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g24053.t1

Sequence Viewer

Length: 1146 bp
ATGGACTTCTTGTCTGGTACACTGTTGTGTCTGTGCTTTATCTCCTGCTTCTTAATCCAAGCCCTCCATAGAAGAACCAAAGTTAGGCTTCCACCAGGACCAAAGCCATTTCCATTGGTTGGAAATCTCTTTGATCTTGGAGACAAACCTCATATCTCTTTGACCAAGCTCTCACAACACTATGGCTCCATTATGTCTTTGAAACTAGGCCAGATAACCACTATAGTAGTTTCTTCACCAACCATGGCCAAAGAAATCCTCCGAATCCATGACCAATTGTTCTGCAACAAACCAATCCCAGATGCGCTGCGAGTAGCGGCTGACAGCTTGCCGTGGATGCCAGTATCACCAAGGTGGAAAAATCTGCGGAAAATATGCACCTCCCAACTCTTTACCACCAGAGTTCTTGATGCCAACAAAGAAAACCGGAGAGCAAAAGTGCAAGAGCTCATAGCTAGTGTCAATGACAGCATGGTAAAGGGTTTGGCAGTAGATATTGGAAAGGCTGCCTTCAAAACTTCACTTGATTTGCTGTCAAGAACTGTTCTCTCAGTGGATTTGGCTGATGATGACTTGAGTAGCAGCAGCGAGATGACTAAAGAGTTTCAGAAGAATGCTAAAGGTATGCTAGAAGAGGCTGGGAAACCGAATTTAGGGGACTATTTTCCTGTGCTTAGGAAGATTGATCCCCAAGGCAGAAGGCGGAGCTTTACAATTTACCACAACAAGATGTTAAGCTTATTTGAATCAGTGATCAGTCAACGGTTGGAATGTAGAAAAAGGGATGATTATGTGACAAGTAATGATCTGTTGGATACTCTAATAGACCTCAGAGAAGAGGAAAATGAGGAAGATTTGAACAACCCCAAAGTTGTTGAATATTTGTTAATGGTTCTATTTGTTGCGGGTACAGAAACAAGTTCAGCATTGGAATGGGCAATGGCGGAGCTACTACACAACCCAAAGTGCCTTTCTAAAGCTAAAGAAGAGCTGGATCAAATGATTGGAAAAGGAAAACCAATCGAGGAATCCGATATTGCTAGACTCCCTTACTTACAAGCAATAATCAAGGAAACCTTTCGCTTGCGCCCAGTAGGTCCATTGCTACCACGAAAAGCTGAAACTGATGTAGAAATAGGGGAATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

382

Amino Acids

42.94

Weight (kDa)

7.58

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 380 1e-55 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 119
AciI CCGC 5 cut(s) 317, 367, 703, 905, 944
AclWI GGATC 2 cut(s) 680, 1002
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 1 cut(s) 649
AfaI GTAC 2 cut(s) 19, 910
AfiI CCNNNNNNNGG 3 cut(s) 84, 119, 653
AgsI TTSAA 5 cut(s) 202, 514, 746, 859, 878
AhdI GACNNNNNGTC 1 cut(s) 10
AjnI CCWGG 1 cut(s) 94
AjuI GAANNNNNNNTTGG 2 cut(s) 955, 987
AleI CACNNNNGTG 2 cut(s) 25, 352
Alw21I GWGCWC 1 cut(s) 450
Alw26I GTCTC 1 cut(s) 135
AlwI GGATC 2 cut(s) 680, 1002
AoxI GGCC 2 cut(s) 208, 246
ApeKI GCWGC 4 cut(s) 307, 506, 582, 585
ApoI RAATTY 1 cut(s) 649
Asp700I GAANNNNTTC 1 cut(s) 1077
AspLEI GCGC 2 cut(s) 307, 1089
AspS9I GGNCC 2 cut(s) 98, 1097
AsuHPI GGTGA 2 cut(s) 228, 339
AvaII GGWCC 2 cut(s) 98, 1097
BalI TGGCCA 1 cut(s) 248
BanII GRGCYC 1 cut(s) 450
Bbv12I GWGCWC 1 cut(s) 450
BbvI GCAGC 4 cut(s) 294, 493, 594, 597
BceAI ACGGC 1 cut(s) 316
BciT130I CCWGG 1 cut(s) 96
BciVI GTATCC 1 cut(s) 808
BclI TGATCA 1 cut(s) 753
BcoDI GTCTC 1 cut(s) 135
BfaI CTAG 4 cut(s) 206, 456, 629, 1041
BfmI CTRYAG 1 cut(s) 222
BfuI GTATCC 1 cut(s) 808
BisI GCNGC 5 cut(s) 308, 318, 507, 583, 586
BlsI GCNGC 5 cut(s) 309, 319, 508, 584, 587
Bme1390I CCNGG 1 cut(s) 96
Bme18I GGWCC 2 cut(s) 98, 1097
BmeRI GACNNNNNGTC 1 cut(s) 10
BmgT120I GGNCC 2 cut(s) 98, 1097
BmiI GGNNCC 1 cut(s) 187
BmrFI CCNGG 1 cut(s) 96
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 3 cut(s) 292, 327, 400
BmuI ACTGGG 1 cut(s) 1085
Bpu10I CCTNAGC 1 cut(s) 674
BpuEI CTTGAG 1 cut(s) 595
BsaJI CCNNGG 4 cut(s) 243, 332, 350, 691
BsaWI WCCGGW 1 cut(s) 426
BsaXI ACNNNNNCTCC 2 cut(s) 170, 200
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 119, 653
Bse1I ACTGG 2 cut(s) 341, 1091
Bse3DI GCAATG 2 cut(s) 945, 1100
BseBI CCWGG 1 cut(s) 96
BseDI CCNNGG 4 cut(s) 243, 332, 350, 691
BseGI GGATG 2 cut(s) 342, 790
BseLI CCNNNNNNNGG 3 cut(s) 84, 119, 653
BseMI GCAATG 2 cut(s) 945, 1100
BseMII CTCAG 2 cut(s) 564, 844
BseNI ACTGG 2 cut(s) 341, 1091
BseXI GCAGC 4 cut(s) 294, 493, 594, 597
BseYI CCCAGC 1 cut(s) 638
BshFI GGCC 2 cut(s) 210, 248
BsiHKAI GWGCWC 1 cut(s) 450
BsiSI CCGG 1 cut(s) 427
BslFI GGGAC 1 cut(s) 671
BslI CCNNNNNNNGG 3 cut(s) 84, 119, 653
BsmAI GTCTC 1 cut(s) 135
BsmFI GGGAC 1 cut(s) 671
BsmI GAATGC 1 cut(s) 619
BsnI GGCC 2 cut(s) 210, 248
Bsp1286I GDGCHC 1 cut(s) 450
Bsp143I GATC 5 cut(s) 133, 685, 753, 805, 994
Bsp19I CCATGG 1 cut(s) 243
BspACI CCGC 5 cut(s) 317, 367, 703, 905, 944
BspANI GGCC 2 cut(s) 210, 248
BspCNI CTCAG 2 cut(s) 563, 843
BspLI GGNNCC 1 cut(s) 187
BspPI GGATC 2 cut(s) 680, 1002
BspQI GCTCTTC 1 cut(s) 981
BsrDI GCAATG 2 cut(s) 945, 1100
BsrI ACTGG 2 cut(s) 341, 1091
BssECI CCNNGG 4 cut(s) 243, 332, 350, 691
BssMI GATC 5 cut(s) 133, 685, 753, 805, 994
BssT1I CCWWGG 3 cut(s) 243, 350, 691
Bst2UI CCWGG 1 cut(s) 96
Bst4CI ACNGT 3 cut(s) 24, 544, 765
Bst6I CTCTTC 3 cut(s) 627, 831, 981
BstC8I GCNNGC 2 cut(s) 329, 1085
BstDEI CTNAG 3 cut(s) 550, 674, 830
BstDSI CCRYGG 2 cut(s) 243, 332
BstF5I GGATG 2 cut(s) 342, 790
BstHHI GCGC 2 cut(s) 307, 1089
BstKTI GATC 5 cut(s) 136, 688, 756, 808, 997
BstMAI GTCTC 1 cut(s) 135
BstMBI GATC 5 cut(s) 133, 685, 753, 805, 994
BstMWI GCNNNNNNNGC 1 cut(s) 337
BstNI CCWGG 1 cut(s) 96
BstSCI CCNGG 1 cut(s) 94
BstSFI CTRYAG 1 cut(s) 222
BstV1I GCAGC 4 cut(s) 294, 493, 594, 597
BsuI GTATCC 1 cut(s) 808
BsuRI GGCC 2 cut(s) 210, 248
BtgI CCRYGG 2 cut(s) 243, 332
BtsCI GGATG 2 cut(s) 342, 790
BtsIMutI CAGTG 3 cut(s) 20, 558, 756
Cac8I GCNNGC 2 cut(s) 329, 1085
CfoI GCGC 2 cut(s) 307, 1089
Cfr13I GGNCC 2 cut(s) 98, 1097
Csp6I GTAC 2 cut(s) 18, 909
CviAII CATG 3 cut(s) 244, 269, 472
CviQI GTAC 2 cut(s) 18, 909
DdeI CTNAG 3 cut(s) 550, 674, 830
DpnI GATC 5 cut(s) 135, 687, 755, 807, 996
DpnII GATC 5 cut(s) 133, 685, 753, 805, 994
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 3 cut(s) 627, 831, 981
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 3 cut(s) 627, 831, 981
EciI GGCGGA 2 cut(s) 718, 959
Ecl136II GAGCTC 1 cut(s) 448
Eco130I CCWWGG 3 cut(s) 243, 350, 691
Eco24I GRGCYC 1 cut(s) 450
Eco47I GGWCC 2 cut(s) 98, 1097
Eco53kI GAGCTC 1 cut(s) 448
EcoICRI GAGCTC 1 cut(s) 448
EcoRII CCWGG 1 cut(s) 94
EcoT14I CCWWGG 3 cut(s) 243, 350, 691
EcoT38I GRGCYC 1 cut(s) 450
ErhI CCWWGG 3 cut(s) 243, 350, 691
FaeI CATG 3 cut(s) 247, 272, 475
FalI AAGNNNNNCTT 6 cut(s) 72, 104, 494, 526, 1061, 1093
FaqI GGGAC 1 cut(s) 671
FatI CATG 3 cut(s) 243, 268, 471
FauI CCCGC 1 cut(s) 898
FbaI TGATCA 1 cut(s) 753
Fnu4HI GCNGC 5 cut(s) 308, 318, 507, 583, 586
FokI GGATG 2 cut(s) 349, 797
FriOI GRGCYC 1 cut(s) 450
Fsp4HI GCNGC 5 cut(s) 308, 318, 507, 583, 586
FspBI CTAG 4 cut(s) 206, 456, 629, 1041
GlaI GCGC 2 cut(s) 306, 1088
GluI GCNGC 5 cut(s) 308, 318, 507, 583, 586
GsaI CCCAGC 1 cut(s) 642
HaeIII GGCC 2 cut(s) 210, 248
HapII CCGG 1 cut(s) 427
HhaI GCGC 2 cut(s) 307, 1089
Hin1II CATG 3 cut(s) 247, 272, 475
Hin6I GCGC 2 cut(s) 305, 1087
HinP1I GCGC 2 cut(s) 305, 1087
HincII GTYRAC 1 cut(s) 761
HindII GTYRAC 1 cut(s) 761
HindIII AAGCTT 1 cut(s) 736
HinfI GANTC 4 cut(s) 264, 746, 1028, 1044
HpaII CCGG 1 cut(s) 427
HphI GGTGA 2 cut(s) 228, 339
Hpy166II GTNNAC 2 cut(s) 20, 761
Hpy188I TCNGA 4 cut(s) 263, 609, 833, 1033
Hpy188III TCNNGA 2 cut(s) 407, 537
Hpy8I GTNNAC 2 cut(s) 20, 761
HpyAV CCTTC 2 cut(s) 520, 693
HpyCH4III ACNGT 3 cut(s) 24, 544, 765
HpyCH4V TGCA 3 cut(s) 285, 378, 442
HpyF10VI GCNNNNNNNGC 1 cut(s) 337
HpyF3I CTNAG 3 cut(s) 550, 674, 830
Hsp92II CATG 3 cut(s) 247, 272, 475
HspAI GCGC 2 cut(s) 305, 1087
Ksp22I TGATCA 1 cut(s) 753
Kzo9I GATC 5 cut(s) 133, 685, 753, 805, 994
LguI GCTCTTC 1 cut(s) 981
LmnI GCTCC 3 cut(s) 191, 705, 946
Lsp1109I GCAGC 4 cut(s) 294, 493, 594, 597
LweI GCATC 3 cut(s) 292, 327, 400
MaeI CTAG 4 cut(s) 206, 456, 629, 1041
MaeIII GTNAC 1 cut(s) 793
MalI GATC 5 cut(s) 135, 687, 755, 807, 996
MboI GATC 5 cut(s) 133, 685, 753, 805, 994
MboII GAAGA 8 cut(s) 84, 225, 622, 644, 691, 848, 863, 998
MfeI CAATTG 1 cut(s) 275
MhlI GDGCHC 1 cut(s) 450
MlsI TGGCCA 1 cut(s) 248
MluCI AATT 3 cut(s) 275, 649, 714
MluNI TGGCCA 1 cut(s) 248
MlyI GAGTC 1 cut(s) 1038
MmeI TCCRAC 3 cut(s) 100, 747, 792
MnlI CCTC 9 cut(s) 74, 159, 269, 391, 628, 832, 839, 841, 1018
Mox20I TGGCCA 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 1077
MscI TGGCCA 1 cut(s) 248
MseI TTAA 3 cut(s) 53, 734, 887
MslI CAYNNNNRTG 3 cut(s) 25, 352, 931
Msp20I TGGCCA 1 cut(s) 248
MspI CCGG 1 cut(s) 427
MspR9I CCNGG 1 cut(s) 96
MunI CAATTG 1 cut(s) 275
Mva1269I GAATGC 1 cut(s) 619
MvaI CCWGG 1 cut(s) 96
MwoI GCNNNNNNNGC 1 cut(s) 337
NcoI CCATGG 1 cut(s) 243
NdeII GATC 5 cut(s) 133, 685, 753, 805, 994
NlaIII CATG 3 cut(s) 247, 272, 475
NlaIV GGNNCC 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 793
OliI CACNNNNGTG 2 cut(s) 25, 352
PciSI GCTCTTC 1 cut(s) 981
PcsI WCGNNNNNNNCGW 1 cut(s) 1029
PctI GAATGC 1 cut(s) 619
PdmI GAANNNNTTC 1 cut(s) 1077
PfeI GAWTC 3 cut(s) 264, 746, 1028
PflMI CCANNNNNTGG 1 cut(s) 119
PkrI GCNGC 5 cut(s) 309, 319, 508, 584, 587
PleI GAGTC 1 cut(s) 1038
PpsI GAGTC 1 cut(s) 1038
Psp124BI GAGCTC 1 cut(s) 450
Psp6I CCWGG 1 cut(s) 94
PspFI CCCAGC 1 cut(s) 638
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 1 cut(s) 187
PspPI GGNCC 2 cut(s) 98, 1097
RsaI GTAC 2 cut(s) 19, 910
RsaNI GTAC 2 cut(s) 18, 909
RseI CAYNNNNRTG 3 cut(s) 25, 352, 931
SacI GAGCTC 1 cut(s) 450
SapI GCTCTTC 1 cut(s) 981
SaqAI TTAA 3 cut(s) 53, 734, 887
SatI GCNGC 5 cut(s) 308, 318, 507, 583, 586
Sau3AI GATC 5 cut(s) 133, 685, 753, 805, 994
Sau96I GGNCC 2 cut(s) 98, 1097
SchI GAGTC 1 cut(s) 1038
ScrFI CCNGG 1 cut(s) 96
SduI GDGCHC 1 cut(s) 450
SfaNI GCATC 3 cut(s) 292, 327, 400
SfcI CTRYAG 1 cut(s) 222
SinI GGWCC 2 cut(s) 98, 1097
SmiMI CAYNNNNRTG 3 cut(s) 25, 352, 931
SmlI CTYRAG 1 cut(s) 574
SmoI CTYRAG 1 cut(s) 574
Sse9I AATT 3 cut(s) 275, 649, 714
SsiI CCGC 5 cut(s) 317, 367, 703, 905, 944
SspI AATATT 1 cut(s) 881
SspMI CTAG 4 cut(s) 206, 456, 629, 1041
SstI GAGCTC 1 cut(s) 450
StyD4I CCNGG 1 cut(s) 94
StyI CCWWGG 3 cut(s) 243, 350, 691
TaaI ACNGT 3 cut(s) 24, 544, 765
TaqI TCGA 1 cut(s) 1023
TasI AATT 3 cut(s) 275, 649, 714
TauI GCSGC 1 cut(s) 320
TfiI GAWTC 3 cut(s) 264, 746, 1028
Tru1I TTAA 3 cut(s) 53, 734, 887
Tru9I TTAA 3 cut(s) 53, 734, 887
TscAI CASTG 3 cut(s) 27, 558, 756
TseFI GTSAC 1 cut(s) 793
TseI GCWGC 4 cut(s) 307, 506, 582, 585
Tsp45I GTSAC 1 cut(s) 793
TspRI CASTG 3 cut(s) 27, 558, 756
Van91I CCANNNNNTGG 1 cut(s) 119
VpaK11BI GGWCC 2 cut(s) 98, 1097
XapI RAATTY 1 cut(s) 649
XmnI GAANNNNTTC 1 cut(s) 1077
XspI CTAG 4 cut(s) 206, 456, 629, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.