Rmu_co8382437.1_g000001

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8382437.1
OG0000168
Physical Location & Seq
Reverse (-)
58 .. 1140
1083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8382437.1_g000001.1.cds

Sequence Viewer

Length: 915 bp
atggccagagagtacaaggagatcatttggggcgtaatggaagaggctgggaaaccaaatttggcggactattttcctgtgcttaggaagcttgacccgcaaggcataaggcggcgctttacgaattactacaacaagatgttaggcttcatggaatatgtgattgatcaaaggttggaatctagaaaaggagatgattatgtcactaataacgatatgttagatactcttataagcatcagtgaagagaaaaatgaggaggatatgaacaatccccaagttgttgagaacttgtttatggctctattaactgcgggcactgatacaacttcaatcacattggaatgggcaatggctgagctactacataacccagaaagcctctcaaaagctcaagatgagctggatagtgtgtttgggaagggaaaattaattgaggagtcggaaattactcaactaccttacttgcaagcaataatcaaagaaacattccggttacacccaacagtcccatttctagtgccacgaaaagcagaatcagatgtagaaatcggagggtacattgtcccaaagaatgcacaagttctagtcaattcttgggccataggcagagaccctagcatttgggacaacccaaactcttttatgccggagaggttcttaggattggagaaccaaattgatgttatgggaagaaactttgatcttattccatttggtggtgggagaagaatatgtcctggactgccactggcaatgaaaatgttacacttgacgttgggttcactcattaactgcttcaattggaaacttgaagatggagttgtatttgagactatgaacatagaagacaagtttggcctcactttacaaatggctcagccacttcgagctgtgccaataagttataattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

304

Amino Acids

34.69

Weight (kDa)

4.78

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 233, 909
AccB7I CCANNNNNTGG 1 cut(s) 719
AciI CCGC 4 cut(s) 65, 98, 112, 314
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 58
AfaI GTAC 2 cut(s) 14, 560
AfiI CCNNNNNNNGG 1 cut(s) 719
AgsI TTSAA 3 cut(s) 333, 802, 815
AjnI CCWGG 1 cut(s) 739
AjuI GAANNNNNNNTTGG 4 cut(s) 44, 76, 840, 872
AluBI AGCT 5 cut(s) 91, 361, 392, 403, 893
AluI AGCT 5 cut(s) 91, 361, 392, 403, 893
Alw26I GTCTC 2 cut(s) 606, 827
AoxI GGCC 3 cut(s) 3, 600, 859
ApoI RAATTY 1 cut(s) 58
AseI ATTAAT 1 cut(s) 431
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 1 cut(s) 600
BaeGI GKGCMC 1 cut(s) 320
BalI TGGCCA 1 cut(s) 5
BbsI GAAGAC 1 cut(s) 855
BccI CCATC 1 cut(s) 812
BciT130I CCWGG 1 cut(s) 741
BclI TGATCA 1 cut(s) 166
BcoDI GTCTC 2 cut(s) 606, 827
BfaI CTAG 4 cut(s) 183, 518, 587, 618
BfoI RGCGCY 1 cut(s) 118
BisI GCNGC 1 cut(s) 113
BlpI GCTNAGC 2 cut(s) 357, 879
BlsI GCNGC 1 cut(s) 114
Bme1390I CCNGG 1 cut(s) 741
BmgT120I GGNCC 1 cut(s) 600
BmrFI CCNGG 1 cut(s) 741
BmsI GCATC 1 cut(s) 246
BpiI GAAGAC 1 cut(s) 855
Bpu10I CCTNAGC 1 cut(s) 83
Bpu1102I GCTNAGC 2 cut(s) 357, 879
BpuEI CTTGAG 1 cut(s) 378
BsaI GGTCTC 1 cut(s) 606
BsaWI WCCGGW 1 cut(s) 492
Bsc4I CCNNNNNNNGG 1 cut(s) 719
Bse1I ACTGG 1 cut(s) 756
Bse3DI GCAATG 2 cut(s) 357, 762
BseBI CCWGG 1 cut(s) 741
BseLI CCNNNNNNNGG 1 cut(s) 719
BseMI GCAATG 2 cut(s) 357, 762
BseMII CTCAG 2 cut(s) 348, 893
BseNI ACTGG 1 cut(s) 756
BseRI GAGGAG 2 cut(s) 272, 452
BseSI GKGCMC 1 cut(s) 320
BseYI CCCAGC 1 cut(s) 47
BshFI GGCC 3 cut(s) 5, 602, 861
BsiSI CCGG 2 cut(s) 493, 650
BslFI GGGAC 3 cut(s) 494, 551, 641
BslI CCNNNNNNNGG 1 cut(s) 719
BsmAI GTCTC 2 cut(s) 606, 827
BsmFI GGGAC 3 cut(s) 494, 551, 641
BsmI GAATGC 1 cut(s) 580
BsnI GGCC 3 cut(s) 5, 602, 861
Bso31I GGTCTC 1 cut(s) 606
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 3 cut(s) 21, 166, 703
Bsp1720I GCTNAGC 2 cut(s) 357, 879
BspACI CCGC 4 cut(s) 65, 98, 112, 314
BspANI GGCC 3 cut(s) 5, 602, 861
BspCNI CTCAG 2 cut(s) 349, 892
BspTNI GGTCTC 1 cut(s) 606
BsrDI GCAATG 2 cut(s) 357, 762
BsrI ACTGG 1 cut(s) 756
BssMI GATC 3 cut(s) 21, 166, 703
Bst2UI CCWGG 1 cut(s) 741
Bst4CI ACNGT 1 cut(s) 508
Bst6I CTCTTC 2 cut(s) 36, 240
BstC8I GCNNGC 2 cut(s) 316, 471
BstDEI CTNAG 4 cut(s) 83, 357, 661, 879
BstH2I RGCGCY 1 cut(s) 118
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 3 cut(s) 24, 169, 706
BstMAI GTCTC 2 cut(s) 606, 827
BstMBI GATC 3 cut(s) 21, 166, 703
BstMWI GCNNNNNNNGC 2 cut(s) 88, 97
BstNI CCWGG 1 cut(s) 741
BstSCI CCNGG 1 cut(s) 739
BstSLI GKGCMC 1 cut(s) 320
BstV2I GAAGAC 1 cut(s) 855
BsuRI GGCC 3 cut(s) 5, 602, 861
BtsIMutI CAGTG 3 cut(s) 247, 318, 749
Cac8I GCNNGC 2 cut(s) 316, 471
CfoI GCGC 1 cut(s) 117
Cfr13I GGNCC 1 cut(s) 600
Csp6I GTAC 2 cut(s) 13, 559
CviAII CATG 1 cut(s) 151
CviQI GTAC 2 cut(s) 13, 559
DdeI CTNAG 4 cut(s) 83, 357, 661, 879
DpnI GATC 3 cut(s) 23, 168, 705
DpnII GATC 3 cut(s) 21, 166, 703
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 36, 240
EarI CTCTTC 2 cut(s) 36, 240
EciI GGCGGA 1 cut(s) 80
Eco31I GGTCTC 1 cut(s) 606
EcoRII CCWGG 1 cut(s) 739
FaeI CATG 1 cut(s) 154
FaqI GGGAC 3 cut(s) 494, 551, 641
FatI CATG 1 cut(s) 150
FauI CCCGC 2 cut(s) 105, 307
FbaI TGATCA 1 cut(s) 166
Fnu4HI GCNGC 1 cut(s) 113
Fsp4HI GCNGC 1 cut(s) 113
FspBI CTAG 4 cut(s) 183, 518, 587, 618
GlaI GCGC 1 cut(s) 116
GluI GCNGC 1 cut(s) 113
GsaI CCCAGC 1 cut(s) 51
HaeII RGCGCY 1 cut(s) 118
HaeIII GGCC 3 cut(s) 5, 602, 861
HapII CCGG 2 cut(s) 493, 650
HhaI GCGC 1 cut(s) 117
Hin1II CATG 1 cut(s) 154
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 3 cut(s) 179, 440, 536
HpaII CCGG 2 cut(s) 493, 650
Hpy166II GTNNAC 1 cut(s) 785
Hpy188I TCNGA 3 cut(s) 445, 541, 554
Hpy188III TCNNGA 2 cut(s) 183, 395
Hpy8I GTNNAC 1 cut(s) 785
HpyAV CCTTC 1 cut(s) 415
HpyCH4III ACNGT 1 cut(s) 508
HpyCH4IV ACGT 1 cut(s) 776
HpyCH4V TGCA 2 cut(s) 469, 578
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 97
HpyF3I CTNAG 4 cut(s) 83, 357, 661, 879
HpySE526I ACGT 1 cut(s) 776
Hsp92II CATG 1 cut(s) 154
HspAI GCGC 1 cut(s) 115
Ksp22I TGATCA 1 cut(s) 166
Kzo9I GATC 3 cut(s) 21, 166, 703
LweI GCATC 1 cut(s) 246
MaeI CTAG 4 cut(s) 183, 518, 587, 618
MaeII ACGT 1 cut(s) 776
MaeIII GTNAC 3 cut(s) 202, 495, 765
MalI GATC 3 cut(s) 23, 168, 705
MboI GATC 3 cut(s) 21, 166, 703
MboII GAAGA 6 cut(s) 53, 257, 705, 741, 827, 860
MfeI CAATTG 1 cut(s) 802
MhlI GDGCHC 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 58, 124, 428, 432, 447, 592, 678, 802, 910
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 2 cut(s) 156, 423
MnlI CCTC 8 cut(s) 37, 250, 253, 392, 430, 548, 648, 872
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 308, 431, 792
MslI CAYNNNNRTG 1 cut(s) 343
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 493, 650
MspR9I CCNGG 1 cut(s) 741
MunI CAATTG 1 cut(s) 802
Mva1269I GAATGC 1 cut(s) 580
MvaI CCWGG 1 cut(s) 741
MwoI GCNNNNNNNGC 2 cut(s) 88, 97
NdeII GATC 3 cut(s) 21, 166, 703
NlaIII CATG 1 cut(s) 154
NmuCI GTSAC 1 cut(s) 202
PctI GAATGC 1 cut(s) 580
PfeI GAWTC 2 cut(s) 179, 536
PflMI CCANNNNNTGG 1 cut(s) 719
PfoI TCCNGGA 1 cut(s) 739
PkrI GCNGC 1 cut(s) 114
PleI GAGTC 1 cut(s) 448
PpsI GAGTC 1 cut(s) 448
PshBI ATTAAT 1 cut(s) 431
PsiI TTATAA 2 cut(s) 233, 909
Psp6I CCWGG 1 cut(s) 739
PspFI CCCAGC 1 cut(s) 47
PspGI CCWGG 1 cut(s) 739
PspPI GGNCC 1 cut(s) 600
RsaI GTAC 2 cut(s) 14, 560
RsaNI GTAC 2 cut(s) 13, 559
RseI CAYNNNNRTG 1 cut(s) 343
SaqAI TTAA 3 cut(s) 308, 431, 792
SatI GCNGC 1 cut(s) 113
Sau3AI GATC 3 cut(s) 21, 166, 703
Sau96I GGNCC 1 cut(s) 600
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 1 cut(s) 741
SduI GDGCHC 1 cut(s) 320
SetI ASST 9 cut(s) 93, 176, 363, 394, 405, 463, 659, 779, 895
SfaNI GCATC 1 cut(s) 246
SmiMI CAYNNNNRTG 1 cut(s) 343
SmlI CTYRAG 1 cut(s) 393
SmoI CTYRAG 1 cut(s) 393
Sse9I AATT 9 cut(s) 58, 124, 428, 432, 447, 592, 678, 802, 910
SsiI CCGC 4 cut(s) 65, 98, 112, 314
SspMI CTAG 4 cut(s) 183, 518, 587, 618
StyD4I CCNGG 1 cut(s) 739
TaaI ACNGT 1 cut(s) 508
TaiI ACGT 1 cut(s) 779
TaqI TCGA 1 cut(s) 889
TasI AATT 9 cut(s) 58, 124, 428, 432, 447, 592, 678, 802, 910
TatI WGTACW 1 cut(s) 12
TauI GCSGC 1 cut(s) 115
TfiI GAWTC 2 cut(s) 179, 536
Tru1I TTAA 3 cut(s) 308, 431, 792
Tru9I TTAA 3 cut(s) 308, 431, 792
TscAI CASTG 3 cut(s) 247, 325, 756
TseFI GTSAC 1 cut(s) 202
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 4 cut(s) 139, 281, 773, 854
TspRI CASTG 3 cut(s) 247, 325, 756
Van91I CCANNNNNTGG 1 cut(s) 719
VspI ATTAAT 1 cut(s) 431
XapI RAATTY 1 cut(s) 58
XbaI TCTAGA 1 cut(s) 182
XspI CTAG 4 cut(s) 183, 518, 587, 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.