RLG00000006902

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
11730132 .. 11733128
2997 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006902

Sequence Viewer

Length: 906 bp
ATGGCCTGGATTCCTATGTCAGCAAGATGGAGAAATCTTCACAAAATATGCAACTTGCAGTTGTTTTTCCCCAAAGTTCTTGATGACAACCAAGCTAACCGACGTTTAAAGGTGCAAAAGCTCATCGATAATGTCAATGAAAGCATGAAGGCCGAGACAGGGAAACCAAACTTATTGGCGGACTATTTTCCTTTGCTTAGGAAGATTGACCCCCAAGGCATAAGGTGGCGCTTGACCTATCACTGCCAGAAAATGATAGAGATCTTTGATCGAATGGTCCATCAAAGGCTGGAATCAAGAAAAGGGGACAGTTATATCACAACCAATGATATGTTGGATACACTTTTGAACATCAGTAAAGAGAAAATGGAGGATATGGACATGCCCGAAACACAACACTTGTTTCTGGATCTATTTGCTGCCGGCACGGACACAACTTCAGCCACATCGGAATGGGCAATGGCCGAGCTATTACGCAACCCAAAAATTCTTTCAAAAGCTCAAGCGGAACTCCAACAAGTGATTGGAAAGGGGAAAGTAGTTGAGGAATCAGACATTGCTGGACTCCCTTACTTACAAGCAATAATCAAAGAAACATTTCGGGTGCACCCAACAGCTCCATTGCTACTTCCCAGGAAAGCAGAAGCAAACATAGAAATTGGCGGAAAATCAATTGATGTTATGGGAAAAAACTTCGAGCTTATTCCGTTTGGTGGTGGGAGAAGAATATGTCCCGGACTTCCATTGGCAATAAGAATGTTACACTTGATGCTGGGTTCACTAATTAACTGCTTTGATTGGAACCTTGAAGATGGAGTTTTACCCGAGACTATGAACATGGCAGAGAAGTTTGGCCTTACTCTACAAATGGCACAGCCACTAAGAGCTGTGCCCAAGAAGTCGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

302

Amino Acids

34.27

Weight (kDa)

8.58

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 25 - 225 4e-41 Cytochrome P450
p450 PF00067 229 - 285 5.1e-10 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 179, 506, 663
AclWI GGATC 1 cut(s) 417
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 1 cut(s) 486
AcuI CTGAAG 1 cut(s) 423
AfiI CCNNNNNNNGG 2 cut(s) 159, 713
AgsI TTSAA 3 cut(s) 349, 495, 809
AjnI CCWGG 2 cut(s) 5, 632
AjuI GAANNNNNNNTTGG 2 cut(s) 475, 507
AluBI AGCT 7 cut(s) 95, 121, 469, 500, 617, 700, 887
AluI AGCT 7 cut(s) 95, 121, 469, 500, 617, 700, 887
Alw21I GWGCWC 1 cut(s) 609
Alw26I GTCTC 2 cut(s) 149, 821
Alw44I GTGCAC 1 cut(s) 605
AlwI GGATC 1 cut(s) 417
Ama87I CYCGRG 1 cut(s) 824
AoxI GGCC 4 cut(s) 3, 150, 462, 853
ApaLI GTGCAC 1 cut(s) 605
ApeKI GCWGC 1 cut(s) 419
ApoI RAATTY 1 cut(s) 486
Asp700I GAANNNNTTC 1 cut(s) 597
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 1 cut(s) 277
AsuC2I CCSGG 1 cut(s) 735
AvaI CYCGRG 1 cut(s) 824
AvaII GGWCC 1 cut(s) 277
BaeGI GKGCMC 2 cut(s) 609, 894
Bbv12I GWGCWC 1 cut(s) 609
BbvI GCAGC 1 cut(s) 406
BccI CCATC 3 cut(s) 21, 288, 806
BciT130I CCWGG 2 cut(s) 7, 634
BciVI GTATCC 1 cut(s) 331
BcnI CCSGG 1 cut(s) 735
BcoDI GTCTC 2 cut(s) 149, 821
BfoI RGCGCY 1 cut(s) 232
BfuI GTATCC 1 cut(s) 331
BglII AGATCT 1 cut(s) 261
BisI GCNGC 1 cut(s) 420
BlsI GCNGC 1 cut(s) 421
Bme1390I CCNGG 3 cut(s) 7, 634, 735
Bme18I GGWCC 1 cut(s) 277
BmeT110I CYCGRG 1 cut(s) 824
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 1 cut(s) 803
BmrFI CCNGG 3 cut(s) 7, 634, 735
BmsI GCATC 1 cut(s) 759
Bpu10I CCTNAGC 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 486
BpuMI CCSGG 1 cut(s) 735
Bsa29I ATCGAT 1 cut(s) 126
BsaBI GATNNNNATC 1 cut(s) 260
BsaJI CCNNGG 2 cut(s) 214, 632
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 713
Bse118I RCCGGY 1 cut(s) 422
Bse3DI GCAATG 3 cut(s) 465, 555, 620
Bse8I GATNNNNATC 1 cut(s) 260
BseBI CCWGG 2 cut(s) 7, 634
BseCI ATCGAT 1 cut(s) 126
BseDI CCNNGG 2 cut(s) 214, 632
BseJI GATNNNNATC 1 cut(s) 260
BseLI CCNNNNNNNGG 2 cut(s) 159, 713
BseMI GCAATG 3 cut(s) 465, 555, 620
BseSI GKGCMC 2 cut(s) 609, 894
BseXI GCAGC 1 cut(s) 406
BseYI CCCAGC 1 cut(s) 772
BshFI GGCC 4 cut(s) 5, 152, 464, 855
BshVI ATCGAT 1 cut(s) 126
BsiHKAI GWGCWC 1 cut(s) 609
BsiHKCI CYCGRG 1 cut(s) 824
BsiSI CCGG 2 cut(s) 423, 735
BslFI GGGAC 2 cut(s) 320, 717
BslI CCNNNNNNNGG 2 cut(s) 159, 713
BsmAI GTCTC 2 cut(s) 149, 821
BsmFI GGGAC 2 cut(s) 320, 717
BsnI GGCC 4 cut(s) 5, 152, 464, 855
BsoBI CYCGRG 1 cut(s) 824
Bsp1286I GDGCHC 2 cut(s) 609, 894
Bsp143I GATC 3 cut(s) 261, 268, 409
BspACI CCGC 3 cut(s) 179, 506, 663
BspANI GGCC 4 cut(s) 5, 152, 464, 855
BspDI ATCGAT 1 cut(s) 126
BspLI GGNNCC 1 cut(s) 803
BspPI GGATC 1 cut(s) 417
BsrDI GCAATG 3 cut(s) 465, 555, 620
BsrFI RCCGGY 1 cut(s) 422
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 2 cut(s) 214, 632
BssMI GATC 3 cut(s) 261, 268, 409
BssT1I CCWWGG 1 cut(s) 214
Bst2UI CCWGG 2 cut(s) 7, 634
Bst4CI ACNGT 1 cut(s) 311
BstC8I GCNNGC 1 cut(s) 424
BstDEI CTNAG 2 cut(s) 197, 881
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 3 cut(s) 264, 271, 412
BstMAI GTCTC 2 cut(s) 149, 821
BstMBI GATC 3 cut(s) 261, 268, 409
BstNI CCWGG 2 cut(s) 7, 634
BstNSI RCATGY 1 cut(s) 385
BstSCI CCNGG 3 cut(s) 5, 632, 733
BstSLI GKGCMC 2 cut(s) 609, 894
BstV1I GCAGC 1 cut(s) 406
BstX2I RGATCY 2 cut(s) 261, 409
BstYI RGATCY 2 cut(s) 261, 409
Bsu15I ATCGAT 1 cut(s) 126
BsuI GTATCC 1 cut(s) 331
BsuRI GGCC 4 cut(s) 5, 152, 464, 855
BsuTUI ATCGAT 1 cut(s) 126
BtsI GCAGTG 1 cut(s) 241
BtsIMutI CAGTG 1 cut(s) 241
Cac8I GCNNGC 1 cut(s) 424
CfoI GCGC 1 cut(s) 231
Cfr10I RCCGGY 1 cut(s) 422
Cfr13I GGNCC 1 cut(s) 277
ClaI ATCGAT 1 cut(s) 126
CviAII CATG 3 cut(s) 145, 382, 838
DdeI CTNAG 2 cut(s) 197, 881
DpnI GATC 3 cut(s) 263, 270, 411
DpnII GATC 3 cut(s) 261, 268, 409
DraI TTTAAA 1 cut(s) 108
EaeI YGGCCR 1 cut(s) 462
EciI GGCGGA 2 cut(s) 194, 678
Eco130I CCWWGG 1 cut(s) 214
Eco47I GGWCC 1 cut(s) 277
Eco57I CTGAAG 1 cut(s) 423
Eco88I CYCGRG 1 cut(s) 824
EcoRII CCWGG 2 cut(s) 5, 632
EcoT14I CCWWGG 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 214
FaeI CATG 3 cut(s) 148, 385, 841
FaqI GGGAC 2 cut(s) 320, 717
FatI CATG 3 cut(s) 144, 381, 837
Fnu4HI GCNGC 1 cut(s) 420
Fsp4HI GCNGC 1 cut(s) 420
GlaI GCGC 1 cut(s) 230
GluI GCNGC 1 cut(s) 420
GsaI CCCAGC 1 cut(s) 776
HaeII RGCGCY 1 cut(s) 232
HaeIII GGCC 4 cut(s) 5, 152, 464, 855
HapII CCGG 2 cut(s) 423, 735
HhaI GCGC 1 cut(s) 231
Hin1II CATG 3 cut(s) 148, 385, 841
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HinfI GANTC 4 cut(s) 10, 293, 548, 564
HpaII CCGG 2 cut(s) 423, 735
Hpy166II GTNNAC 2 cut(s) 607, 779
Hpy188I TCNGA 2 cut(s) 451, 553
Hpy188III TCNNGA 3 cut(s) 80, 297, 407
Hpy8I GTNNAC 2 cut(s) 607, 779
Hpy99I CGWCG 1 cut(s) 105
HpyAV CCTTC 1 cut(s) 142
HpyCH4III ACNGT 1 cut(s) 311
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 4 cut(s) 51, 58, 115, 607
HpyF3I CTNAG 2 cut(s) 197, 881
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 3 cut(s) 148, 385, 841
HspAI GCGC 1 cut(s) 229
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Kzo9I GATC 3 cut(s) 261, 268, 409
LmnI GCTCC 1 cut(s) 622
Lsp1109I GCAGC 1 cut(s) 406
LweI GCATC 1 cut(s) 759
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 1 cut(s) 759
MalI GATC 3 cut(s) 263, 270, 411
MboI GATC 3 cut(s) 261, 268, 409
MboII GAAGA 4 cut(s) 29, 214, 735, 821
MfeI CAATTG 1 cut(s) 672
MflI RGATCY 2 cut(s) 261, 409
MhlI GDGCHC 2 cut(s) 609, 894
MluCI AATT 4 cut(s) 486, 657, 672, 783
MlyI GAGTC 1 cut(s) 558
MmeI TCCRAC 2 cut(s) 315, 538
MnlI CCTC 2 cut(s) 364, 538
MroNI GCCGGC 1 cut(s) 422
MroXI GAANNNNTTC 1 cut(s) 597
MseI TTAA 2 cut(s) 107, 786
MslI CAYNNNNRTG 1 cut(s) 451
MspI CCGG 2 cut(s) 423, 735
MspR9I CCNGG 3 cut(s) 7, 634, 735
MunI CAATTG 1 cut(s) 672
MvaI CCWGG 2 cut(s) 7, 634
NaeI GCCGGC 1 cut(s) 424
NciI CCSGG 1 cut(s) 735
NdeII GATC 3 cut(s) 261, 268, 409
NgoMIV GCCGGC 1 cut(s) 422
NlaIII CATG 3 cut(s) 148, 385, 841
NlaIV GGNNCC 1 cut(s) 803
NmeAIII GCCGAG 2 cut(s) 178, 490
NspI RCATGY 1 cut(s) 385
PdiI GCCGGC 1 cut(s) 424
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 3 cut(s) 10, 293, 548
PfoI TCCNGGA 1 cut(s) 733
PkrI GCNGC 1 cut(s) 421
PleI GAGTC 1 cut(s) 558
PpsI GAGTC 1 cut(s) 558
Psp6I CCWGG 2 cut(s) 5, 632
PspFI CCCAGC 1 cut(s) 772
PspGI CCWGG 2 cut(s) 5, 632
PspN4I GGNNCC 1 cut(s) 803
PspPI GGNCC 1 cut(s) 277
PsuI RGATCY 2 cut(s) 261, 409
RseI CAYNNNNRTG 1 cut(s) 451
SaqAI TTAA 2 cut(s) 107, 786
SatI GCNGC 1 cut(s) 420
Sau3AI GATC 3 cut(s) 261, 268, 409
Sau96I GGNCC 1 cut(s) 277
SchI GAGTC 1 cut(s) 558
ScrFI CCNGG 3 cut(s) 7, 634, 735
SduI GDGCHC 2 cut(s) 609, 894
SfaNI GCATC 1 cut(s) 759
SinI GGWCC 1 cut(s) 277
SmiMI CAYNNNNRTG 1 cut(s) 451
SmlI CTYRAG 1 cut(s) 501
SmoI CTYRAG 1 cut(s) 501
Sse9I AATT 4 cut(s) 486, 657, 672, 783
SsiI CCGC 3 cut(s) 179, 506, 663
StyD4I CCNGG 3 cut(s) 5, 632, 733
StyI CCWWGG 1 cut(s) 214
TaaI ACNGT 1 cut(s) 311
TaiI ACGT 1 cut(s) 106
TaqI TCGA 3 cut(s) 126, 271, 696
TasI AATT 4 cut(s) 486, 657, 672, 783
TfiI GAWTC 3 cut(s) 10, 293, 548
Tru1I TTAA 2 cut(s) 107, 786
Tru9I TTAA 2 cut(s) 107, 786
TscAI CASTG 1 cut(s) 248
TseI GCWGC 1 cut(s) 419
TspDTI ATGAA 3 cut(s) 153, 161, 848
TspGWI ACGGA 2 cut(s) 443, 696
TspRI CASTG 1 cut(s) 248
VneI GTGCAC 1 cut(s) 605
VpaK11BI GGWCC 1 cut(s) 277
XapI RAATTY 1 cut(s) 486
XceI RCATGY 1 cut(s) 385
XcmI CCANNNNNNNNNTGG 2 cut(s) 331, 521
XmnI GAANNNNTTC 1 cut(s) 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.