MD16G1115900.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
8237984 .. 8238235
252 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1115900.v1.1.491

Sequence Viewer

Length: 252 bp
ATGTCCAGATTACTAACGGACACAATGTCCATGGTAAATTACAATCAACCACGGACATTTACCGTGATAGATGTGGGTTTTTCTTCTAGTGTGTGTCCACATGGCGGACTGTTATCGCATACGATGTTCTCTATGGATTTAGCAGATCCGAGGAGTGAGACAGCTAAAGAATTTAAGGACATTGTGTTGGGTTTGATGGAGGAGGCCGGGAAGCCGAATTTGGGGGACTACTTTCCTGGGCTTGCAACTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

9.09

Weight (kDa)

4.82

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 105
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 2 cut(s) 170, 217
AfiI CCNNNNNNNGG 2 cut(s) 104, 221
AhdI GACNNNNNGTC 1 cut(s) 25
AjnI CCWGG 1 cut(s) 235
AjuI GAANNNNNNNTTGG 2 cut(s) 203, 235
AluBI AGCT 1 cut(s) 164
AluI AGCT 1 cut(s) 164
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 1 cut(s) 140
AoxI GGCC 1 cut(s) 204
ApoI RAATTY 2 cut(s) 170, 217
AsuC2I CCSGG 1 cut(s) 208
BccI CCATC 1 cut(s) 190
BciT130I CCWGG 1 cut(s) 237
BcnI CCSGG 1 cut(s) 208
BcoDI GTCTC 1 cut(s) 152
BfaI CTAG 1 cut(s) 87
Bme1390I CCNGG 2 cut(s) 208, 237
BmeRI GACNNNNNGTC 1 cut(s) 25
BmrFI CCNGG 2 cut(s) 208, 237
BpuMI CCSGG 1 cut(s) 208
BsaJI CCNNGG 4 cut(s) 30, 50, 149, 236
Bsc4I CCNNNNNNNGG 2 cut(s) 104, 221
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 4 cut(s) 30, 50, 149, 236
BseLI CCNNNNNNNGG 2 cut(s) 104, 221
BseRI GAGGAG 2 cut(s) 166, 215
BshFI GGCC 1 cut(s) 206
BsiSI CCGG 1 cut(s) 207
BslFI GGGAC 1 cut(s) 239
BslI CCNNNNNNNGG 2 cut(s) 104, 221
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 239
BsnI GGCC 1 cut(s) 206
Bsp143I GATC 1 cut(s) 145
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 1 cut(s) 105
BspANI GGCC 1 cut(s) 206
BspPI GGATC 1 cut(s) 140
BssECI CCNNGG 4 cut(s) 30, 50, 149, 236
BssMI GATC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 30
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 2 cut(s) 64, 111
BstC8I GCNNGC 1 cut(s) 243
BstDSI CCRYGG 2 cut(s) 30, 50
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 1 cut(s) 145
BstNI CCWGG 1 cut(s) 237
BstSCI CCNGG 2 cut(s) 206, 235
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BsuRI GGCC 1 cut(s) 206
BtgI CCRYGG 2 cut(s) 30, 50
Cac8I GCNNGC 1 cut(s) 243
CviAII CATG 2 cut(s) 31, 101
CviJI RGCY 4 cut(s) 164, 206, 214, 241
CviKI_1 RGCY 4 cut(s) 164, 206, 214, 241
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
DriI GACNNNNNGTC 1 cut(s) 25
Eam1105I GACNNNNNGTC 1 cut(s) 25
EciI GGCGGA 1 cut(s) 120
Eco130I CCWWGG 1 cut(s) 30
EcoRII CCWGG 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 30
FaeI CATG 2 cut(s) 34, 104
FaiI YATR 4 cut(s) 32, 102, 120, 134
FaqI GGGAC 1 cut(s) 239
FatI CATG 2 cut(s) 30, 100
FspBI CTAG 1 cut(s) 87
HaeIII GGCC 1 cut(s) 206
HapII CCGG 1 cut(s) 207
Hin1II CATG 2 cut(s) 34, 104
HpaII CCGG 1 cut(s) 207
Hpy166II GTNNAC 1 cut(s) 98
Hpy188I TCNGA 1 cut(s) 150
Hpy188III TCNNGA 1 cut(s) 6
Hpy8I GTNNAC 1 cut(s) 98
HpyCH4III ACNGT 2 cut(s) 64, 111
HpyCH4V TGCA 1 cut(s) 245
Hsp92II CATG 2 cut(s) 34, 104
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 3 cut(s) 19, 220, 222
MaeI CTAG 1 cut(s) 87
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 1 cut(s) 75
MflI RGATCY 1 cut(s) 145
MluCI AATT 3 cut(s) 37, 170, 217
MnlI CCTC 3 cut(s) 144, 193, 196
MseI TTAA 1 cut(s) 174
MspI CCGG 1 cut(s) 207
MspR9I CCNGG 2 cut(s) 208, 237
MvaI CCWGG 1 cut(s) 237
NciI CCSGG 1 cut(s) 208
NcoI CCATGG 1 cut(s) 30
NdeII GATC 1 cut(s) 145
NlaIII CATG 2 cut(s) 34, 104
Psp6I CCWGG 1 cut(s) 235
PspGI CCWGG 1 cut(s) 235
PsuI RGATCY 1 cut(s) 145
SaqAI TTAA 1 cut(s) 174
Sau3AI GATC 1 cut(s) 145
ScrFI CCNGG 2 cut(s) 208, 237
SetI ASST 1 cut(s) 166
Sse9I AATT 3 cut(s) 37, 170, 217
SsiI CCGC 1 cut(s) 105
SspMI CTAG 1 cut(s) 87
StyD4I CCNGG 2 cut(s) 206, 235
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 2 cut(s) 64, 111
TasI AATT 3 cut(s) 37, 170, 217
Tru1I TTAA 1 cut(s) 174
Tru9I TTAA 1 cut(s) 174
TspGWI ACGGA 2 cut(s) 32, 67
XapI RAATTY 2 cut(s) 170, 217
XspI CTAG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.