Prupe.1G230600_v2.0.a1

iron ion binding

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
24428427 .. 24429735
1309 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G230600.1

Sequence Viewer

Length: 336 bp
ATGGATTTCTTGAGTTGTTGTATCGTCCTGCTAAACCTTTTCTTTGTGTTGTTGTTCTCAATTATTCAAGCTCTGCAAAGCAAAGCCAATCCCGAAAGGCATCTTCTCCCACCTGGACCAAAGCCATTTCCCTTCATTGGCAATCTTTTAGAGCTTGGCAACAAACCCCATCTCTCTCTCACCAAGCTTTCTCAAATCTATGGCCCCATTATAACTTTGCAATTCGGCCAATATTCATATTGGGGATTCCCCATCCCCACCTTTAATGGGGAATGGGTTCCCCGTCCAACCCCACCTTTTGGGATTGGCCTTGCTTTGCAGAGCTTGAATAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

112

Amino Acids

12.42

Weight (kDa)

8.71

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AccB7I CCANNNNNTGG 1 cut(s) 299
AcoI YGGCCR 1 cut(s) 226
AfiI CCNNNNNNNGG 3 cut(s) 137, 267, 299
AgsI TTSAA 2 cut(s) 68, 328
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 4 cut(s) 71, 154, 187, 324
AluI AGCT 4 cut(s) 71, 154, 187, 324
AoxI GGCC 3 cut(s) 202, 226, 307
Asp700I GAANNNNTTC 1 cut(s) 276
AspS9I GGNCC 2 cut(s) 116, 203
AsuHPI GGTGA 1 cut(s) 172
AvaII GGWCC 1 cut(s) 116
BccI CCATC 2 cut(s) 177, 260
BciT130I CCWGG 1 cut(s) 114
Bme1390I CCNGG 1 cut(s) 114
Bme18I GGWCC 1 cut(s) 116
BmgT120I GGNCC 2 cut(s) 116, 203
BmiI GGNNCC 2 cut(s) 205, 279
BmrFI CCNGG 1 cut(s) 114
BmsI GCATC 1 cut(s) 109
BpuEI CTTGAG 1 cut(s) 31
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 267, 299
BseBI CCWGG 1 cut(s) 114
BseGI GGATG 1 cut(s) 252
BseLI CCNNNNNNNGG 3 cut(s) 137, 267, 299
BshFI GGCC 3 cut(s) 204, 228, 309
BslI CCNNNNNNNGG 3 cut(s) 137, 267, 299
BsnI GGCC 3 cut(s) 204, 228, 309
BspANI GGCC 3 cut(s) 204, 228, 309
BspLI GGNNCC 2 cut(s) 205, 279
Bst2UI CCWGG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 252
BstNI CCWGG 1 cut(s) 114
BstSCI CCNGG 1 cut(s) 112
BsuRI GGCC 3 cut(s) 204, 228, 309
BtsCI GGATG 1 cut(s) 252
Cfr13I GGNCC 2 cut(s) 116, 203
CviJI RGCY 9 cut(s) 71, 86, 124, 154, 187, 204, 228, 309, 324
CviKI_1 RGCY 9 cut(s) 71, 86, 124, 154, 187, 204, 228, 309, 324
EaeI YGGCCR 1 cut(s) 226
Eco47I GGWCC 1 cut(s) 116
EcoRII CCWGG 1 cut(s) 112
FaiI YATR 3 cut(s) 201, 212, 238
FokI GGATG 1 cut(s) 239
HaeIII GGCC 3 cut(s) 204, 228, 309
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 1 cut(s) 246
HphI GGTGA 1 cut(s) 172
Hpy188III TCNNGA 2 cut(s) 10, 92
HpyAV CCTTC 1 cut(s) 142
HpyCH4V TGCA 3 cut(s) 76, 220, 319
LpnPI CCDG 3 cut(s) 41, 99, 126
LweI GCATC 1 cut(s) 109
MboII GAAGA 1 cut(s) 95
MluCI AATT 3 cut(s) 60, 221, 331
MmeI TCCRAC 1 cut(s) 311
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 1 cut(s) 264
MspR9I CCNGG 1 cut(s) 114
MvaI CCWGG 1 cut(s) 114
NlaIV GGNNCC 2 cut(s) 205, 279
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 1 cut(s) 246
PflMI CCANNNNNTGG 1 cut(s) 299
PsiI TTATAA 1 cut(s) 212
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 2 cut(s) 205, 279
PspPI GGNCC 2 cut(s) 116, 203
SaqAI TTAA 1 cut(s) 264
Sau96I GGNCC 2 cut(s) 116, 203
ScrFI CCNGG 1 cut(s) 114
SetI ASST 8 cut(s) 39, 73, 115, 156, 189, 263, 298, 326
SfaNI GCATC 1 cut(s) 109
SinI GGWCC 1 cut(s) 116
SmlI CTYRAG 1 cut(s) 10
SmoI CTYRAG 1 cut(s) 10
Sse9I AATT 3 cut(s) 60, 221, 331
SspI AATATT 1 cut(s) 233
StyD4I CCNGG 1 cut(s) 112
TasI AATT 3 cut(s) 60, 221, 331
TfiI GAWTC 1 cut(s) 246
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TspDTI ATGAA 2 cut(s) 124, 225
Van91I CCANNNNNTGG 1 cut(s) 299
VpaK11BI GGWCC 1 cut(s) 116
XmnI GAANNNNTTC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.