Rorug04G0245800

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000168
Physical Location & Seq
Forward (+)
41574531 .. 41578657
4127 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0245800.1

Sequence Viewer

Length: 1284 bp
ATGCAAGCAACTCAAGCAGTGAGTAATGGGGTTACAGAAGCTCCTCCTGCTCAGGCTGGTGCTCAAAATCTCAAGTCCATACAGGAAGAAACTACAGAACCAGGGCATAGTGGAAGACGCCCCGATATATCACTTCAAATACCCCCAAGACATGCGGCGTTTGGCAATAGCCGGAGCGGCAAGGGTTTACTCCAGTCTCAAGGTTCCTCTAAGGGTAGTCCACTTTCAGGAGGGTTATTCCGGGCTTTAAGCTTCAAGAAGAAAGGTATACTGCCGGATGGTGAGAAAAGTTCCCTCCTTAATTCAGACTCCAGTACAGCTCCGGGAAGTCCAGTAGTGGCCAATAATGCACCAGCATTTTCTTGGACAAAGTGTGCCTCTCTTCCTGTTACACCAGCATCGAATTTGTCACCATCCATTTCTACACCAGTTTCTGCAAGGATGTATAATGAACGGCACAAGCCACATAAAGAAACTGTTAAGGCTACAGTTTCAAGGTCCCTGTCTGTGCCTGGACGAAATATAGTTATTGTTAGATCCGTATCTTTTGCTGCTCGAAATGAGAACATCCAGACAGATCCTAGTGATGATCAAATAGCTCCGGTTCCAGTTGAGCCTGATGATGAAGAAATTCCTGAAGAAGAAGCAGTATGCAGGATTTGTCTTGATGAATGTGAAGAACAAAATACACTCAAAATGGAATGCAGTTGCAAAGGTGATCTCAGACTTGTACATGAACATTGTGCAATTAAGTGGTTTAGCACAAGAGGAAACAGGACATGCGAGGTATGTGGGCAGGAGGTTCAGAACTTACCTGTAACCTTGCTTCGGGTGCAGAGCTCTGTTCAAAGGGCCAGCAGACAGAACCAGAACCAACAGAGTTTGAATCCAGAAACGATAAGTGCATGGCAGGACTTCGTGATACTGGTATTAATTAGCACAATATGCTATTTCTTCTTCCTTGAGCAACTACTGATTCGTGACTTGAAAACTCAAGCTATTGTAGTTGCAGCACCATTTGCATTTACATTGGGTCTCTTGGCATCCATATTTGCCATTGTCCTTGCAATCAAGGAGTATATATGGACATATGCGGCTCTCGAGTTTGGACTTGTAGCGCTCACCGTACACCTTTTCTATTCTACATTTCATGTGCCGGCTGTTTATTCAATATTGCTTGCATCAGTAGTGGGTTTTGGGATATCAATGAGCCTCAACTCCTTGTATATGCAATACTTCACTTGGAGAGTTCAAGTTTCTCAAAACAACACTAGCCCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

427

Amino Acids

46.57

Weight (kDa)

6.71

Isoelectric Point (pI)

55.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RINGv PF12906 218 - 264 4.3e-14 RING-variant domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 177
AccI GTMKAC 1 cut(s) 268
AciI CCGC 3 cut(s) 155, 177, 1094
AclWI GGATC 2 cut(s) 531, 572
AcoI YGGCCR 1 cut(s) 339
AcsI RAATTY 2 cut(s) 403, 630
AcuI CTGAAG 1 cut(s) 657
AcyI GRCGYC 1 cut(s) 118
AfaI GTAC 3 cut(s) 316, 732, 1128
AfeI AGCGCT 1 cut(s) 1119
AfiI CCNNNNNNNGG 2 cut(s) 227, 828
AgsI TTSAA 8 cut(s) 137, 256, 495, 848, 886, 988, 1170, 1253
AjnI CCWGG 2 cut(s) 100, 511
AluBI AGCT 6 cut(s) 41, 252, 320, 599, 840, 998
AluI AGCT 6 cut(s) 41, 252, 320, 599, 840, 998
Alw21I GWGCWC 2 cut(s) 64, 842
Alw26I GTCTC 2 cut(s) 201, 1040
AlwI GGATC 2 cut(s) 531, 572
AlwNI CAGNNNCTG 1 cut(s) 434
Ama87I CYCGRG 1 cut(s) 1100
Aor51HI AGCGCT 1 cut(s) 1119
AoxI GGCC 2 cut(s) 339, 852
ApeKI GCWGC 2 cut(s) 551, 1010
ApoI RAATTY 2 cut(s) 403, 630
AseI ATTAAT 1 cut(s) 932
Asp700I GAANNNNTTC 1 cut(s) 630
AspLEI GCGC 1 cut(s) 1120
AspS9I GGNCC 2 cut(s) 498, 852
AsuC2I CCSGG 2 cut(s) 242, 324
AsuHPI GGTGA 4 cut(s) 293, 402, 728, 1114
AvaI CYCGRG 1 cut(s) 1100
AvaII GGWCC 1 cut(s) 498
BalI TGGCCA 1 cut(s) 341
BanII GRGCYC 1 cut(s) 842
BarI GAAGNNNNNNTAC 2 cut(s) 810, 842
BbsI GAAGAC 1 cut(s) 121
Bbv12I GWGCWC 2 cut(s) 64, 842
BbvI GCAGC 2 cut(s) 538, 1022
BccI CCATC 2 cut(s) 272, 421
BceAI ACGGC 1 cut(s) 470
BciT130I CCWGG 2 cut(s) 102, 513
BclI TGATCA 1 cut(s) 589
BcnI CCSGG 2 cut(s) 242, 324
BcoDI GTCTC 2 cut(s) 201, 1040
BfaI CTAG 2 cut(s) 582, 1272
BfmI CTRYAG 2 cut(s) 93, 486
BfoI RGCGCY 1 cut(s) 1121
BglI GCCNNNNNGGC 1 cut(s) 177
BisI GCNGC 5 cut(s) 156, 178, 552, 1011, 1095
BlsI GCNGC 5 cut(s) 157, 179, 553, 1012, 1096
Bme1390I CCNGG 4 cut(s) 102, 242, 324, 513
Bme18I GGWCC 1 cut(s) 498
BmeT110I CYCGRG 1 cut(s) 1100
BmgT120I GGNCC 2 cut(s) 498, 852
BmiI GGNNCC 3 cut(s) 205, 500, 606
BmrFI CCNGG 4 cut(s) 102, 242, 324, 513
BmsI GCATC 3 cut(s) 407, 1052, 1190
BpiI GAAGAC 1 cut(s) 121
BpmI CTGGAG 2 cut(s) 176, 295
Bpu10I CCTNAGC 1 cut(s) 51
BpuEI CTTGAG 4 cut(s) 56, 183, 978, 983
BpuMI CCSGG 2 cut(s) 242, 324
BsaBI GATNNNNATC 1 cut(s) 541
BsaHI GRCGYC 1 cut(s) 118
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 1 cut(s) 101
BsaWI WCCGGW 1 cut(s) 601
BsaXI ACNNNNNCTCC 2 cut(s) 25, 55
Bsc4I CCNNNNNNNGG 2 cut(s) 227, 828
Bse118I RCCGGY 1 cut(s) 1156
Bse1I ACTGG 6 cut(s) 193, 312, 332, 428, 608, 930
Bse8I GATNNNNATC 1 cut(s) 541
BseBI CCWGG 2 cut(s) 102, 513
BseDI CCNNGG 1 cut(s) 101
BseGI GGATG 5 cut(s) 283, 413, 447, 567, 1043
BseJI GATNNNNATC 1 cut(s) 541
BseLI CCNNNNNNNGG 2 cut(s) 227, 828
BseMII CTCAG 2 cut(s) 65, 736
BseNI ACTGG 6 cut(s) 193, 312, 332, 428, 608, 930
BseRI GAGGAG 1 cut(s) 33
BseXI GCAGC 2 cut(s) 538, 1022
BseYI CCCAGC 1 cut(s) 1276
BsgI GTGCAG 1 cut(s) 854
BshFI GGCC 2 cut(s) 341, 854
BsiHKAI GWGCWC 2 cut(s) 64, 842
BsiHKCI CYCGRG 1 cut(s) 1100
BsiSI CCGG 6 cut(s) 172, 241, 275, 323, 602, 1157
BslFI GGGAC 1 cut(s) 484
BslI CCNNNNNNNGG 2 cut(s) 227, 828
BsmAI GTCTC 2 cut(s) 201, 1040
BsmFI GGGAC 1 cut(s) 484
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 2 cut(s) 341, 854
Bso31I GGTCTC 1 cut(s) 1040
BsoBI CYCGRG 1 cut(s) 1100
Bsp1286I GDGCHC 2 cut(s) 64, 842
Bsp1407I TGTACA 1 cut(s) 730
Bsp143I GATC 4 cut(s) 536, 577, 589, 718
BspACI CCGC 3 cut(s) 155, 177, 1094
BspANI GGCC 2 cut(s) 341, 854
BspCNI CTCAG 2 cut(s) 64, 735
BspLI GGNNCC 3 cut(s) 205, 500, 606
BspPI GGATC 2 cut(s) 531, 572
BspTNI GGTCTC 1 cut(s) 1040
BsrBI CCGCTC 1 cut(s) 177
BsrFI RCCGGY 1 cut(s) 1156
BsrGI TGTACA 1 cut(s) 730
BsrI ACTGG 6 cut(s) 193, 312, 332, 428, 608, 930
BssAI RCCGGY 1 cut(s) 1156
BssECI CCNNGG 1 cut(s) 101
BssMI GATC 4 cut(s) 536, 577, 589, 718
BssNAI GTATAC 1 cut(s) 269
BssNI GRCGYC 1 cut(s) 118
Bst1107I GTATAC 1 cut(s) 269
Bst2UI CCWGG 2 cut(s) 102, 513
Bst4CI ACNGT 3 cut(s) 478, 490, 1126
Bst6I CTCTTC 1 cut(s) 387
BstACI GRCGYC 1 cut(s) 118
BstAPI GCANNNNNTGC 2 cut(s) 945, 1019
BstAUI TGTACA 1 cut(s) 730
BstC8I GCNNGC 4 cut(s) 6, 856, 1158, 1179
BstDEI CTNAG 3 cut(s) 51, 210, 722
BstF5I GGATG 5 cut(s) 283, 413, 447, 567, 1043
BstH2I RGCGCY 1 cut(s) 1121
BstHHI GCGC 1 cut(s) 1120
BstKTI GATC 4 cut(s) 539, 580, 592, 721
BstMAI GTCTC 2 cut(s) 201, 1040
BstMBI GATC 4 cut(s) 536, 577, 589, 718
BstMWI GCNNNNNNNGC 7 cut(s) 14, 47, 177, 347, 832, 945, 1019
BstNI CCWGG 2 cut(s) 102, 513
BstNSI RCATGY 2 cut(s) 155, 783
BstSCI CCNGG 4 cut(s) 100, 240, 322, 511
BstSFI CTRYAG 2 cut(s) 93, 486
BstV1I GCAGC 2 cut(s) 538, 1022
BstV2I GAAGAC 1 cut(s) 121
BstX2I RGATCY 2 cut(s) 536, 577
BstYI RGATCY 2 cut(s) 536, 577
BstZ17I GTATAC 1 cut(s) 269
BsuRI GGCC 2 cut(s) 341, 854
BtsCI GGATG 5 cut(s) 283, 413, 447, 567, 1043
BtsI GCAGTG 1 cut(s) 24
BtsIMutI CAGTG 1 cut(s) 24
Cac8I GCNNGC 4 cut(s) 6, 856, 1158, 1179
CaiI CAGNNNCTG 1 cut(s) 434
CfoI GCGC 1 cut(s) 1120
Cfr10I RCCGGY 1 cut(s) 1156
Cfr13I GGNCC 2 cut(s) 498, 852
CseI GACGC 1 cut(s) 126
Csp6I GTAC 3 cut(s) 315, 731, 1127
CviAII CATG 6 cut(s) 152, 734, 780, 906, 1151, 1281
CviQI GTAC 3 cut(s) 315, 731, 1127
DdeI CTNAG 3 cut(s) 51, 210, 722
DpnI GATC 4 cut(s) 538, 579, 591, 720
DpnII GATC 4 cut(s) 536, 577, 589, 718
EaeI YGGCCR 1 cut(s) 339
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Ecl136II GAGCTC 1 cut(s) 840
Eco24I GRGCYC 1 cut(s) 842
Eco31I GGTCTC 1 cut(s) 1040
Eco32I GATATC 1 cut(s) 1203
Eco47I GGWCC 1 cut(s) 498
Eco47III AGCGCT 1 cut(s) 1119
Eco53kI GAGCTC 1 cut(s) 840
Eco57I CTGAAG 1 cut(s) 657
Eco88I CYCGRG 1 cut(s) 1100
EcoICRI GAGCTC 1 cut(s) 840
EcoO109I RGGNCCY 1 cut(s) 498
EcoRII CCWGG 2 cut(s) 100, 511
EcoRV GATATC 1 cut(s) 1203
EcoT38I GRGCYC 1 cut(s) 842
FaeI CATG 6 cut(s) 155, 737, 783, 909, 1154, 1284
FaqI GGGAC 1 cut(s) 484
FatI CATG 6 cut(s) 151, 733, 779, 905, 1150, 1280
FauNDI CATATG 1 cut(s) 1090
FbaI TGATCA 1 cut(s) 589
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 5 cut(s) 156, 178, 552, 1011, 1095
FokI GGATG 5 cut(s) 290, 400, 454, 554, 1030
FriOI GRGCYC 1 cut(s) 842
Fsp4HI GCNGC 5 cut(s) 156, 178, 552, 1011, 1095
FspBI CTAG 2 cut(s) 582, 1272
GlaI GCGC 1 cut(s) 1119
GluI GCNGC 5 cut(s) 156, 178, 552, 1011, 1095
GsaI CCCAGC 1 cut(s) 1280
GsuI CTGGAG 2 cut(s) 176, 295
HaeII RGCGCY 1 cut(s) 1121
HaeIII GGCC 2 cut(s) 341, 854
HapII CCGG 6 cut(s) 172, 241, 275, 323, 602, 1157
HgaI GACGC 1 cut(s) 126
HhaI GCGC 1 cut(s) 1120
Hin1I GRCGYC 1 cut(s) 118
Hin1II CATG 6 cut(s) 155, 737, 783, 909, 1154, 1284
Hin6I GCGC 1 cut(s) 1118
HinP1I GCGC 1 cut(s) 1118
HindIII AAGCTT 1 cut(s) 250
HinfI GANTC 3 cut(s) 308, 886, 976
HpaII CCGG 6 cut(s) 172, 241, 275, 323, 602, 1157
HphI GGTGA 4 cut(s) 293, 402, 728, 1114
Hpy166II GTNNAC 4 cut(s) 188, 221, 269, 1129
Hpy188I TCNGA 3 cut(s) 307, 725, 807
Hpy188III TCNNGA 9 cut(s) 228, 256, 571, 635, 665, 890, 919, 980, 1100
Hpy8I GTNNAC 4 cut(s) 188, 221, 269, 1129
HpyCH4III ACNGT 3 cut(s) 478, 490, 1126
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 47, 177, 347, 832, 945, 1019
HpyF3I CTNAG 3 cut(s) 51, 210, 722
Hsp92I GRCGYC 1 cut(s) 118
Hsp92II CATG 6 cut(s) 155, 737, 783, 909, 1154, 1284
HspAI GCGC 1 cut(s) 1118
KroI GCCGGC 1 cut(s) 1156
KroNI GCCGGC 1 cut(s) 1158
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 4 cut(s) 536, 577, 589, 718
LmnI GCTCC 4 cut(s) 46, 174, 325, 604
Lsp1109I GCAGC 2 cut(s) 538, 1022
LweI GCATC 3 cut(s) 407, 1052, 1190
MaeI CTAG 2 cut(s) 582, 1272
MaeIII GTNAC 5 cut(s) 31, 388, 408, 817, 980
MalI GATC 4 cut(s) 538, 579, 591, 720
MbiI CCGCTC 1 cut(s) 177
MboI GATC 4 cut(s) 536, 577, 589, 718
MflI RGATCY 2 cut(s) 536, 577
MhlI GDGCHC 2 cut(s) 64, 842
MlsI TGGCCA 1 cut(s) 341
MluCI AATT 5 cut(s) 301, 403, 630, 747, 933
MluNI TGGCCA 1 cut(s) 341
MlyI GAGTC 1 cut(s) 302
MnlI CCTC 9 cut(s) 54, 217, 224, 305, 388, 761, 778, 793, 1223
Mox20I TGGCCA 1 cut(s) 341
MroNI GCCGGC 1 cut(s) 1156
MroXI GAANNNNTTC 1 cut(s) 630
MscI TGGCCA 1 cut(s) 341
MseI TTAA 5 cut(s) 248, 300, 480, 750, 932
Msp20I TGGCCA 1 cut(s) 341
MspI CCGG 6 cut(s) 172, 241, 275, 323, 602, 1157
MspR9I CCNGG 4 cut(s) 102, 242, 324, 513
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 2 cut(s) 102, 513
MwoI GCNNNNNNNGC 7 cut(s) 14, 47, 177, 347, 832, 945, 1019
NaeI GCCGGC 1 cut(s) 1158
NciI CCSGG 2 cut(s) 242, 324
NdeI CATATG 1 cut(s) 1090
NdeII GATC 4 cut(s) 536, 577, 589, 718
NgoMIV GCCGGC 1 cut(s) 1156
NlaIII CATG 6 cut(s) 155, 737, 783, 909, 1154, 1284
NlaIV GGNNCC 3 cut(s) 205, 500, 606
NmuCI GTSAC 2 cut(s) 408, 980
NspI RCATGY 2 cut(s) 155, 783
PaeR7I CTCGAG 1 cut(s) 1100
PctI GAATGC 1 cut(s) 707
PdiI GCCGGC 1 cut(s) 1158
PdmI GAANNNNTTC 1 cut(s) 630
PfeI GAWTC 2 cut(s) 886, 976
PfoI TCCNGGA 1 cut(s) 322
PkrI GCNGC 5 cut(s) 157, 179, 553, 1012, 1096
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PpuMI RGGWCCY 1 cut(s) 498
PshBI ATTAAT 1 cut(s) 932
Psp124BI GAGCTC 1 cut(s) 842
Psp5II RGGWCCY 1 cut(s) 498
Psp6I CCWGG 2 cut(s) 100, 511
PspFI CCCAGC 1 cut(s) 1276
PspGI CCWGG 2 cut(s) 100, 511
PspN4I GGNNCC 3 cut(s) 205, 500, 606
PspPI GGNCC 2 cut(s) 498, 852
PspPPI RGGWCCY 1 cut(s) 498
PstNI CAGNNNCTG 1 cut(s) 434
PsuI RGATCY 2 cut(s) 536, 577
RsaI GTAC 3 cut(s) 316, 732, 1128
RsaNI GTAC 3 cut(s) 315, 731, 1127
SacI GAGCTC 1 cut(s) 842
SaqAI TTAA 5 cut(s) 248, 300, 480, 750, 932
SatI GCNGC 5 cut(s) 156, 178, 552, 1011, 1095
Sau3AI GATC 4 cut(s) 536, 577, 589, 718
Sau96I GGNCC 2 cut(s) 498, 852
SchI GAGTC 1 cut(s) 302
ScrFI CCNGG 4 cut(s) 102, 242, 324, 513
SduI GDGCHC 2 cut(s) 64, 842
SfaNI GCATC 3 cut(s) 407, 1052, 1190
SfcI CTRYAG 2 cut(s) 93, 486
Sfr274I CTCGAG 1 cut(s) 1100
SinI GGWCC 1 cut(s) 498
SlaI CTCGAG 1 cut(s) 1100
SmlI CTYRAG 6 cut(s) 12, 71, 198, 962, 993, 1100
SmoI CTYRAG 6 cut(s) 12, 71, 198, 962, 993, 1100
Sse9I AATT 5 cut(s) 301, 403, 630, 747, 933
SsiI CCGC 3 cut(s) 155, 177, 1094
SspI AATATT 1 cut(s) 1173
SspMI CTAG 2 cut(s) 582, 1272
SstI GAGCTC 1 cut(s) 842
StyD4I CCNGG 4 cut(s) 100, 240, 322, 511
TaaI ACNGT 3 cut(s) 478, 490, 1126
TaqI TCGA 3 cut(s) 401, 556, 1101
TasI AATT 5 cut(s) 301, 403, 630, 747, 933
TatI WGTACW 2 cut(s) 314, 730
TauI GCSGC 3 cut(s) 158, 180, 1097
TfiI GAWTC 2 cut(s) 886, 976
Tru1I TTAA 5 cut(s) 248, 300, 480, 750, 932
Tru9I TTAA 5 cut(s) 248, 300, 480, 750, 932
TscAI CASTG 1 cut(s) 24
TseFI GTSAC 2 cut(s) 408, 980
TseI GCWGC 2 cut(s) 551, 1010
Tsp45I GTSAC 2 cut(s) 408, 980
TspDTI ATGAA 5 cut(s) 465, 639, 684, 750, 1139
TspGWI ACGGA 1 cut(s) 529
TspRI CASTG 1 cut(s) 24
VpaK11BI GGWCC 1 cut(s) 498
VspI ATTAAT 1 cut(s) 932
XapI RAATTY 2 cut(s) 403, 630
XceI RCATGY 2 cut(s) 155, 783
XcmI CCANNNNNNNNNTGG 1 cut(s) 360
XhoI CTCGAG 1 cut(s) 1100
XmiI GTMKAC 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 630
XspI CTAG 2 cut(s) 582, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.