Rh7CG340200

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
38073721 .. 38075209
1489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG340200.1

Sequence Viewer

Length: 669 bp
ATGGCTTGGCTTCCCGTATCAGCAAGATGGAGAAATCTTCGCACAATATGCAACTTGCAATTGTTTGCCCCCAAAGTTCTTGATGCTAACCAAGCCAAACGGCGGGTAAAGGTGCAAAAGCTCGTAGATGATGTCAATGAATGCATGAGGGCCGGTGAGGCAGTGGATATCGGAAGGGCTGTTTTCTCAACCACACTCAATTTGTTGTCACAAACTATCTTCTCTGTGGATTTAGCTAACCCGAGTAGCAAGACAACTAGGGAGTTCAAGGCGACTGTTTGGGGTATGATGGAAGAGATAGGAAAACCAAACTTGGCAGATTATTTTCCTTTTCTTAGGAAGCTTGATCCGCAAGGCATAAGGCGGCGCTTGACCCATCACTTCCAAATTACAGTAGACATGTTTGATCGAATGATCCATCAAAGGTTGGAATCAAGAAAACGGGATGGTTATATCCCAACCAATGATATGTTGGATACACTTCTGAATATCAATGAAGACAAAATGGAGGATATGGACATGCCTGAAACTCAACATTTATTTCTGGATCTATTTGCTGCTGGTACGGACACAAGTTCAGGCGTTCAGCCACAATGGAATGGGCAATGGCTGAGCTACTACGCAACCCAGAAATCCTTTCGAAAGCTCAAGCAGAACTTGAGCAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

222

Amino Acids

25.76

Weight (kDa)

9.25

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 7 - 193 5.3e-19 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 396
AciI CCGC 3 cut(s) 103, 350, 364
AclWI GGATC 3 cut(s) 341, 409, 555
AfaI GTAC 1 cut(s) 565
AfiI CCNNNNNNNGG 1 cut(s) 102
AflIII ACRYGT 1 cut(s) 399
AgsI TTSAA 1 cut(s) 268
AluBI AGCT 5 cut(s) 121, 236, 343, 615, 646
AluI AGCT 5 cut(s) 121, 236, 343, 615, 646
AlwI GGATC 3 cut(s) 341, 409, 555
Ama87I CYCGRG 1 cut(s) 241
AoxI GGCC 1 cut(s) 150
ApeKI GCWGC 1 cut(s) 557
AspLEI GCGC 1 cut(s) 369
AspS9I GGNCC 1 cut(s) 150
AsuHPI GGTGA 1 cut(s) 167
AsuII TTCGAA 1 cut(s) 640
AvaI CYCGRG 1 cut(s) 241
BbsI GAAGAC 1 cut(s) 504
BbvI GCAGC 1 cut(s) 544
BccI CCATC 5 cut(s) 21, 283, 384, 426, 440
BceAI ACGGC 1 cut(s) 116
BciVI GTATCC 1 cut(s) 469
BfaI CTAG 1 cut(s) 258
BfoI RGCGCY 1 cut(s) 370
BfuI GTATCC 1 cut(s) 469
BglI GCCNNNNNGGC 1 cut(s) 158
BisI GCNGC 2 cut(s) 365, 558
BlpI GCTNAGC 1 cut(s) 611
BlsI GCNGC 2 cut(s) 366, 559
BmeT110I CYCGRG 1 cut(s) 241
BmgT120I GGNCC 1 cut(s) 150
BmsI GCATC 1 cut(s) 73
BpiI GAAGAC 1 cut(s) 504
Bpu1102I GCTNAGC 1 cut(s) 611
Bpu14I TTCGAA 1 cut(s) 640
BpuEI CTTGAG 1 cut(s) 632
Bsc4I CCNNNNNNNGG 1 cut(s) 102
Bse118I RCCGGY 1 cut(s) 152
Bse3DI GCAATG 1 cut(s) 611
BseGI GGATG 1 cut(s) 451
BseLI CCNNNNNNNGG 1 cut(s) 102
BseMI GCAATG 1 cut(s) 611
BseMII CTCAG 1 cut(s) 602
BseXI GCAGC 1 cut(s) 544
BshFI GGCC 1 cut(s) 152
BsiHKCI CYCGRG 1 cut(s) 241
BsiSI CCGG 1 cut(s) 153
BslI CCNNNNNNNGG 1 cut(s) 102
BsmI GAATGC 1 cut(s) 146
BsnI GGCC 1 cut(s) 152
BsoBI CYCGRG 1 cut(s) 241
Bsp119I TTCGAA 1 cut(s) 640
Bsp143I GATC 4 cut(s) 346, 406, 414, 547
Bsp1720I GCTNAGC 1 cut(s) 611
BspACI CCGC 3 cut(s) 103, 350, 364
BspANI GGCC 1 cut(s) 152
BspCNI CTCAG 1 cut(s) 603
BspPI GGATC 3 cut(s) 341, 409, 555
BspT104I TTCGAA 1 cut(s) 640
BsrDI GCAATG 1 cut(s) 611
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssMI GATC 4 cut(s) 346, 406, 414, 547
Bst4CI ACNGT 2 cut(s) 277, 394
Bst6I CTCTTC 1 cut(s) 288
BstAPI GCANNNNNTGC 1 cut(s) 48
BstBI TTCGAA 1 cut(s) 640
BstDEI CTNAG 2 cut(s) 335, 611
BstF5I GGATG 1 cut(s) 451
BstH2I RGCGCY 1 cut(s) 370
BstHHI GCGC 1 cut(s) 369
BstKTI GATC 4 cut(s) 349, 409, 417, 550
BstMBI GATC 4 cut(s) 346, 406, 414, 547
BstMWI GCNNNNNNNGC 4 cut(s) 48, 92, 158, 349
BstNSI RCATGY 2 cut(s) 403, 523
BstV1I GCAGC 1 cut(s) 544
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 1 cut(s) 547
BstYI RGATCY 1 cut(s) 547
BsuI GTATCC 1 cut(s) 469
BsuRI GGCC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 451
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 1 cut(s) 168
CfoI GCGC 1 cut(s) 369
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 150
Csp6I GTAC 1 cut(s) 564
CviAII CATG 3 cut(s) 145, 400, 520
CviQI GTAC 1 cut(s) 564
DdeI CTNAG 2 cut(s) 335, 611
DpnI GATC 4 cut(s) 348, 408, 416, 549
DpnII GATC 4 cut(s) 346, 406, 414, 547
Eam1104I CTCTTC 1 cut(s) 288
EarI CTCTTC 1 cut(s) 288
Eco32I GATATC 1 cut(s) 169
Eco88I CYCGRG 1 cut(s) 241
EcoRV GATATC 1 cut(s) 169
EcoT22I ATGCAT 1 cut(s) 146
FaeI CATG 3 cut(s) 148, 403, 523
FaiI YATR 9 cut(s) 49, 146, 287, 359, 401, 453, 470, 515, 521
FalI AAGNNNNNCTT 1 cut(s) 641
FatI CATG 3 cut(s) 144, 399, 519
FauI CCCGC 1 cut(s) 96
FblI GTMKAC 1 cut(s) 396
Fnu4HI GCNGC 2 cut(s) 365, 558
FokI GGATG 1 cut(s) 458
Fsp4HI GCNGC 2 cut(s) 365, 558
FspBI CTAG 1 cut(s) 258
GlaI GCGC 1 cut(s) 368
GluI GCNGC 2 cut(s) 365, 558
HaeII RGCGCY 1 cut(s) 370
HaeIII GGCC 1 cut(s) 152
HapII CCGG 1 cut(s) 153
HhaI GCGC 1 cut(s) 369
Hin1II CATG 3 cut(s) 148, 403, 523
Hin6I GCGC 1 cut(s) 367
HinP1I GCGC 1 cut(s) 367
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 1 cut(s) 431
HpaII CCGG 1 cut(s) 153
HphI GGTGA 1 cut(s) 167
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 2 cut(s) 173, 486
Hpy188III TCNNGA 3 cut(s) 80, 435, 545
Hpy8I GTNNAC 1 cut(s) 397
HpyAV CCTTC 1 cut(s) 168
HpyCH4III ACNGT 2 cut(s) 277, 394
HpyCH4V TGCA 4 cut(s) 51, 58, 115, 144
HpyF10VI GCNNNNNNNGC 4 cut(s) 48, 92, 158, 349
HpyF3I CTNAG 2 cut(s) 335, 611
Hsp92II CATG 3 cut(s) 148, 403, 523
HspAI GCGC 1 cut(s) 367
Kzo9I GATC 4 cut(s) 346, 406, 414, 547
LpnPI CCDG 6 cut(s) 166, 530, 537, 546, 564, 641
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 1 cut(s) 73
MaeI CTAG 1 cut(s) 258
MaeIII GTNAC 1 cut(s) 207
MalI GATC 4 cut(s) 348, 408, 416, 549
MboI GATC 4 cut(s) 346, 406, 414, 547
MboII GAAGA 4 cut(s) 29, 211, 305, 509
MfeI CAATTG 1 cut(s) 59
MflI RGATCY 1 cut(s) 547
MluCI AATT 3 cut(s) 59, 199, 387
MmeI TCCRAC 2 cut(s) 408, 453
MnlI CCTC 3 cut(s) 141, 151, 502
Mph1103I ATGCAT 1 cut(s) 146
MspI CCGG 1 cut(s) 153
MunI CAATTG 1 cut(s) 59
Mva1269I GAATGC 1 cut(s) 146
MwoI GCNNNNNNNGC 4 cut(s) 48, 92, 158, 349
NdeII GATC 4 cut(s) 346, 406, 414, 547
NlaIII CATG 3 cut(s) 148, 403, 523
NmuCI GTSAC 1 cut(s) 207
NsiI ATGCAT 1 cut(s) 146
NspI RCATGY 2 cut(s) 403, 523
NspV TTCGAA 1 cut(s) 640
PciI ACATGT 1 cut(s) 399
PctI GAATGC 1 cut(s) 146
PfeI GAWTC 1 cut(s) 431
PkrI GCNGC 2 cut(s) 366, 559
PscI ACATGT 1 cut(s) 399
PspPI GGNCC 1 cut(s) 150
PsuI RGATCY 1 cut(s) 547
RsaI GTAC 1 cut(s) 565
RsaNI GTAC 1 cut(s) 564
SatI GCNGC 2 cut(s) 365, 558
Sau3AI GATC 4 cut(s) 346, 406, 414, 547
Sau96I GGNCC 1 cut(s) 150
SetI ASST 7 cut(s) 114, 123, 238, 345, 428, 617, 648
SfaNI GCATC 1 cut(s) 73
SfuI TTCGAA 1 cut(s) 640
SmlI CTYRAG 2 cut(s) 647, 658
SmoI CTYRAG 2 cut(s) 647, 658
Sse9I AATT 3 cut(s) 59, 199, 387
SsiI CCGC 3 cut(s) 103, 350, 364
SspMI CTAG 1 cut(s) 258
TaaI ACNGT 2 cut(s) 277, 394
TaqI TCGA 2 cut(s) 409, 640
TasI AATT 3 cut(s) 59, 199, 387
TauI GCSGC 1 cut(s) 367
TfiI GAWTC 1 cut(s) 431
TscAI CASTG 1 cut(s) 168
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 1 cut(s) 557
Tsp45I GTSAC 1 cut(s) 207
TspDTI ATGAA 2 cut(s) 153, 510
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 1 cut(s) 168
XceI RCATGY 2 cut(s) 403, 523
XcmI CCANNNNNNNNNTGG 1 cut(s) 469
XmiI GTMKAC 1 cut(s) 396
XspI CTAG 1 cut(s) 258
Zsp2I ATGCAT 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.