Rh7AG315200

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
35413923 .. 35414624
702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG315200.1

Sequence Viewer

Length: 702 bp
ATGAGTTTGCAGCTAGGCCAATTAACCACAATCGTAGTTTCTTCAACGACTTTGGCCAAAGAAATCCTCCGAACTCATGACCATGTGTTCTGCAACCGAACCCTCCCAGAGGCAATCCACGCCTGCAAACACAGCGATTACAGCATGGCTTGGCTTCCCGTATCAGCAAGATGGAGAAATCTTCGTACAATTTGCAACTTGCAATTGTTTGCCCCCAAAGTTCTTGATGCTAACCAAGCCAAACGGAGGGTAAAGGTGCAAAAGCTCATAGATGATGTCAATGAAAGCATGAGGGCCGGTGAGGCAGTGGATATCGGAACGGGTGCTTTCTCAACCACACTCAATCTGTTGTCACAGACTATCTTCTCTGTGGATTTAGCTGACCCGAGTAGTGAGACAACTAGGGAGTTCAAGGAGACTGTTTGGGGTATGATGGAAGAGATAGGAAAACCAAGCTTGGCGGATTGTTTTCCTTTTCTTAGGAAGCTTGATCCGCAAGGCATAAGGCGGCGCTTGACCCATTACTTCCAAATTACAGTAGACATGTTTGATCGAATGATCCATCAAAGGTTGGAATCAAGAAAACGGGATGGTTATATCTCAACCAATGATATGTTGGATACACTTATGAATATCAATGAAGAGAAAATGGAGGATATGGACGTGCCTGAAACTCAACATTTATTTCTGGTTAGGCAATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

233

Amino Acids

26.85

Weight (kDa)

6.39

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 222 1.8e-18 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 540
AciI CCGC 3 cut(s) 461, 494, 508
AclWI GGATC 2 cut(s) 485, 553
AcoI YGGCCR 1 cut(s) 54
AfaI GTAC 1 cut(s) 187
AfiI CCNNNNNNNGG 2 cut(s) 109, 246
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 2 cut(s) 45, 412
AjiI CACGTC 1 cut(s) 664
AluBI AGCT 5 cut(s) 13, 265, 380, 456, 487
AluI AGCT 5 cut(s) 13, 265, 380, 456, 487
Alw26I GTCTC 2 cut(s) 389, 410
AlwI GGATC 2 cut(s) 485, 553
Ama87I CYCGRG 1 cut(s) 385
AoxI GGCC 3 cut(s) 16, 54, 294
ApeKI GCWGC 1 cut(s) 10
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 1 cut(s) 294
AsuHPI GGTGA 1 cut(s) 311
AvaI CYCGRG 1 cut(s) 385
BalI TGGCCA 1 cut(s) 56
BbvI GCAGC 1 cut(s) 22
BccI CCATC 4 cut(s) 165, 427, 570, 584
BciVI GTATCC 1 cut(s) 613
BcoDI GTCTC 2 cut(s) 389, 410
BfaI CTAG 2 cut(s) 14, 402
BfoI RGCGCY 1 cut(s) 514
BfuI GTATCC 1 cut(s) 613
BglI GCCNNNNNGGC 1 cut(s) 302
BisI GCNGC 2 cut(s) 11, 509
BlsI GCNGC 2 cut(s) 12, 510
BmeT110I CYCGRG 1 cut(s) 385
BmgBI CACGTC 1 cut(s) 664
BmgT120I GGNCC 1 cut(s) 294
BmsI GCATC 1 cut(s) 217
Bsc4I CCNNNNNNNGG 2 cut(s) 109, 246
Bse118I RCCGGY 1 cut(s) 296
BseGI GGATG 1 cut(s) 595
BseLI CCNNNNNNNGG 2 cut(s) 109, 246
BseXI GCAGC 1 cut(s) 22
BshFI GGCC 3 cut(s) 18, 56, 296
BsiHKCI CYCGRG 1 cut(s) 385
BsiSI CCGG 1 cut(s) 297
BslI CCNNNNNNNGG 2 cut(s) 109, 246
BsmAI GTCTC 2 cut(s) 389, 410
BsnI GGCC 3 cut(s) 18, 56, 296
BsoBI CYCGRG 1 cut(s) 385
Bsp143I GATC 3 cut(s) 490, 550, 558
BspACI CCGC 3 cut(s) 461, 494, 508
BspANI GGCC 3 cut(s) 18, 56, 296
BspHI TCATGA 1 cut(s) 76
BspPI GGATC 2 cut(s) 485, 553
BsrFI RCCGGY 1 cut(s) 296
BssAI RCCGGY 1 cut(s) 296
BssMI GATC 3 cut(s) 490, 550, 558
Bst4CI ACNGT 2 cut(s) 421, 538
Bst6I CTCTTC 2 cut(s) 432, 636
BstC8I GCNNGC 1 cut(s) 124
BstDEI CTNAG 1 cut(s) 479
BstENI CCTNNNNNAGG 1 cut(s) 107
BstF5I GGATG 1 cut(s) 595
BstH2I RGCGCY 1 cut(s) 514
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 3 cut(s) 493, 553, 561
BstMAI GTCTC 2 cut(s) 389, 410
BstMBI GATC 3 cut(s) 490, 550, 558
BstMWI GCNNNNNNNGC 6 cut(s) 119, 132, 141, 236, 302, 493
BstNSI RCATGY 1 cut(s) 547
BstV1I GCAGC 1 cut(s) 22
BsuI GTATCC 1 cut(s) 613
BsuRI GGCC 3 cut(s) 18, 56, 296
BtrI CACGTC 1 cut(s) 664
BtsCI GGATG 1 cut(s) 595
BtsI GCAGTG 1 cut(s) 312
BtsIMutI CAGTG 1 cut(s) 312
Cac8I GCNNGC 1 cut(s) 124
CciI TCATGA 1 cut(s) 76
CfoI GCGC 1 cut(s) 513
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 1 cut(s) 294
Csp6I GTAC 1 cut(s) 186
CviAII CATG 5 cut(s) 77, 83, 145, 289, 544
CviQI GTAC 1 cut(s) 186
DdeI CTNAG 1 cut(s) 479
DpnI GATC 3 cut(s) 492, 552, 560
DpnII GATC 3 cut(s) 490, 550, 558
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 2 cut(s) 432, 636
EarI CTCTTC 2 cut(s) 432, 636
EciI GGCGGA 1 cut(s) 476
Eco32I GATATC 1 cut(s) 313
Eco88I CYCGRG 1 cut(s) 385
EcoNI CCTNNNNNAGG 1 cut(s) 107
EcoRV GATATC 1 cut(s) 313
FaeI CATG 5 cut(s) 80, 86, 148, 292, 547
FatI CATG 5 cut(s) 76, 82, 144, 288, 543
FblI GTMKAC 1 cut(s) 540
Fnu4HI GCNGC 2 cut(s) 11, 509
FokI GGATG 1 cut(s) 602
Fsp4HI GCNGC 2 cut(s) 11, 509
FspBI CTAG 2 cut(s) 14, 402
GlaI GCGC 1 cut(s) 512
GluI GCNGC 2 cut(s) 11, 509
HaeII RGCGCY 1 cut(s) 514
HaeIII GGCC 3 cut(s) 18, 56, 296
HapII CCGG 1 cut(s) 297
HhaI GCGC 1 cut(s) 513
Hin1II CATG 5 cut(s) 80, 86, 148, 292, 547
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HindIII AAGCTT 2 cut(s) 454, 485
HinfI GANTC 1 cut(s) 575
HpaII CCGG 1 cut(s) 297
HphI GGTGA 1 cut(s) 311
Hpy166II GTNNAC 1 cut(s) 541
Hpy188I TCNGA 2 cut(s) 71, 317
Hpy188III TCNNGA 3 cut(s) 77, 224, 579
Hpy8I GTNNAC 1 cut(s) 541
HpyCH4III ACNGT 2 cut(s) 421, 538
HpyCH4IV ACGT 1 cut(s) 663
HpyCH4V TGCA 6 cut(s) 10, 93, 126, 195, 202, 259
HpyF10VI GCNNNNNNNGC 6 cut(s) 119, 132, 141, 236, 302, 493
HpyF3I CTNAG 1 cut(s) 479
HpySE526I ACGT 1 cut(s) 663
Hsp92II CATG 5 cut(s) 80, 86, 148, 292, 547
HspAI GCGC 1 cut(s) 511
Kzo9I GATC 3 cut(s) 490, 550, 558
LpnPI CCDG 5 cut(s) 120, 136, 310, 674, 681
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 1 cut(s) 217
MaeI CTAG 2 cut(s) 14, 402
MaeII ACGT 1 cut(s) 663
MaeIII GTNAC 1 cut(s) 351
MalI GATC 3 cut(s) 492, 552, 560
MboI GATC 3 cut(s) 490, 550, 558
MboII GAAGA 5 cut(s) 33, 173, 355, 449, 653
MfeI CAATTG 1 cut(s) 203
MlsI TGGCCA 1 cut(s) 56
MluCI AATT 4 cut(s) 20, 189, 203, 531
MluNI TGGCCA 1 cut(s) 56
MmeI TCCRAC 2 cut(s) 552, 597
MnlI CCTC 7 cut(s) 77, 103, 113, 240, 285, 295, 646
Mox20I TGGCCA 1 cut(s) 56
MscI TGGCCA 1 cut(s) 56
MseI TTAA 1 cut(s) 23
MslI CAYNNNNRTG 1 cut(s) 81
Msp20I TGGCCA 1 cut(s) 56
MspI CCGG 1 cut(s) 297
MunI CAATTG 1 cut(s) 203
MwoI GCNNNNNNNGC 6 cut(s) 119, 132, 141, 236, 302, 493
NdeII GATC 3 cut(s) 490, 550, 558
NlaIII CATG 5 cut(s) 80, 86, 148, 292, 547
NmuCI GTSAC 1 cut(s) 351
NspI RCATGY 1 cut(s) 547
PagI TCATGA 1 cut(s) 76
PciI ACATGT 1 cut(s) 543
PfeI GAWTC 1 cut(s) 575
PkrI GCNGC 2 cut(s) 12, 510
PscI ACATGT 1 cut(s) 543
PspPI GGNCC 1 cut(s) 294
RsaI GTAC 1 cut(s) 187
RsaNI GTAC 1 cut(s) 186
RseI CAYNNNNRTG 1 cut(s) 81
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 2 cut(s) 11, 509
Sau3AI GATC 3 cut(s) 490, 550, 558
Sau96I GGNCC 1 cut(s) 294
SetI ASST 8 cut(s) 15, 258, 267, 382, 458, 489, 572, 666
SfaNI GCATC 1 cut(s) 217
SmiMI CAYNNNNRTG 1 cut(s) 81
Sse9I AATT 4 cut(s) 20, 189, 203, 531
SsiI CCGC 3 cut(s) 461, 494, 508
SspMI CTAG 2 cut(s) 14, 402
TaaI ACNGT 2 cut(s) 421, 538
TaiI ACGT 1 cut(s) 666
TaqI TCGA 1 cut(s) 553
TasI AATT 4 cut(s) 20, 189, 203, 531
TauI GCSGC 1 cut(s) 511
TfiI GAWTC 1 cut(s) 575
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TscAI CASTG 1 cut(s) 312
TseFI GTSAC 1 cut(s) 351
TseI GCWGC 1 cut(s) 10
Tsp45I GTSAC 1 cut(s) 351
TspDTI ATGAA 3 cut(s) 297, 644, 654
TspGWI ACGGA 1 cut(s) 259
TspRI CASTG 1 cut(s) 312
XagI CCTNNNNNAGG 1 cut(s) 107
XceI RCATGY 1 cut(s) 547
XcmI CCANNNNNNNNNTGG 1 cut(s) 613
XmiI GTMKAC 1 cut(s) 540
XspI CTAG 2 cut(s) 14, 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.