Rroxscaffold_3G00237050

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000168
Physical Location & Seq
Forward (+)
24561796 .. 24563818
2023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00237050.1

Sequence Viewer

Length: 1524 bp
ATGGATTTCTTGTCTAGTATAGTACTGTTGTGTCTCTGCTTTATCTCCTGGTTCTTAATCCAAGCCCTCCATAGAAGAACCAGAGTTAGGCTTCCACCAGGACCAAAGCCATTTCCATTGATTGGAAATCTGTTTGAGCTTGGAGACAAACCTCATCTCTCTTTGACCAAGCTTTCACAAAACCATGGCCCCATAATGTCTTTGAAACTAGGCCGGATAACCACTATTGTAGTTTCTTCATCAACCATGGCCAAAGAAATCCTCCGAACCAACGACCAACTCTTTTGCAACCGAACAATCCCAGATGCGTTGCGAGACATAGGAGACTACAGTTTGGCTTGGATACCAGTATCAACAAGGTGGAGAAATCTTCGAAAAATATGCACCTCCCAGCTCTTCCACACCAAAGTACTTGATGCCAACCAAGAAAACCGGCGAGTGAAAGTGCAAGAGCTCATAGCTAGTGTCAATGACTGCATGGTAAAGGGTTTGGCAATAGATATTGGAAAGGCTGCTTTCAAAACTACACTCAATTTGCTGTCGAGAACTATTTTCTCGGTGGATTTGGCTGATGACTCGAGTAGTAGTAGTGAGATGACTAAAGAGTTCAAGAAGATTATTAATGGTATCGTGGAAGAGGCTGGGAAGCCGAATTTGGGGGACTATTTTCCTGTGATTAGGAAGATTGATCCCCAAGGCATAAGGCGGCGCTTTACGAATTATTACAACAAGATGTTAGGCTTGATTGAATCAGTGATCAGTCAAAGGTTGGAATGTAGAAAAGGGGTTGATTATATAACAAGTAATGATATGTTGGATGCTCTTATAAACCTCAGTGAAGAGAAAAATGAGGAGGATTTGAAGAACTCCGAAGTTGTTGAACATTTGTTTGTGGTTCTATTTGTTGCGGGAACAGATACCACTTCAGCCACATTGGAATGGGCAATGGCGGAGCTACTACACAACCCAAAGAGCCTTTCTAAAGCTCAAGAAGAGCTGGATCAAATGATTGGAAAAGGAAAACCAATCGAGGAAACCGACATTGCTAGACTCCCTTACTTGCAAGCAATAATCAAGGAAACCTTCCGGTTGCACCCAACGGTTCCGTTGCTACTGCCACGAAAAGCTGAAACAGATGTAGAAATTGGGGGCTATATTGTCCCAAAAGGTGCACAAGTTCTAGTTAATGTTTGGGCCATAGGCCGAGACCCCGGCCTTTGGGACAACCCAAACTCTTTTATGCCGGATAGGTTCTTAGGATTAGACAACCAATTTGATGTTATGGGAAAAAACTTTGAGCTTATTCCATTTGGCGGTGGGAGGAGAATCTGTCCAGGTTTGCCATTGGCAATGAGAATGTTGCACTTGATGTTGGGTTCACTCATTAACTGCTTTGATTGGAAGCTTGAAGATGGAGTTGTACCTGAGACTATGAACATGGAAGACAAGTTTGGCCTCACTTTACAAATGGCTCAGCCTCTCAAAGCTGCTCCCCAGTCCTCATTGGTTTCTACTTTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

507

Amino Acids

57.07

Weight (kDa)

7.08

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 486 2.5e-102 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
AccB7I CCANNNNNTGG 1 cut(s) 122
AciI CCGC 4 cut(s) 706, 908, 950, 1314
AclWI GGATC 2 cut(s) 683, 1008
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 1 cut(s) 652
AcuI CTGAAG 1 cut(s) 909
AfaI GTAC 3 cut(s) 24, 411, 1422
AfiI CCNNNNNNNGG 5 cut(s) 87, 122, 656, 1218, 1313
AgsI TTSAA 7 cut(s) 205, 520, 610, 749, 862, 881, 1409
AjnI CCWGG 3 cut(s) 47, 97, 1333
AjuI GAANNNNNNNTTGG 6 cut(s) 638, 670, 961, 993, 1434, 1466
Alw21I GWGCWC 2 cut(s) 456, 1174
Alw26I GTCTC 6 cut(s) 38, 138, 309, 318, 1200, 1421
Alw44I GTGCAC 1 cut(s) 1170
AlwI GGATC 2 cut(s) 683, 1008
Ama87I CYCGRG 1 cut(s) 577
AoxI GGCC 7 cut(s) 187, 211, 249, 1194, 1201, 1213, 1453
ApaLI GTGCAC 1 cut(s) 1170
ApeKI GCWGC 2 cut(s) 512, 1487
ApoI RAATTY 1 cut(s) 652
ArsI GACNNNNNNTTYG 2 cut(s) 1256, 1288
AseI ATTAAT 1 cut(s) 621
AspLEI GCGC 1 cut(s) 711
AspS9I GGNCC 3 cut(s) 101, 188, 1194
AsuC2I CCSGG 1 cut(s) 1212
AsuII TTCGAA 1 cut(s) 373
AvaI CYCGRG 1 cut(s) 577
AvaII GGWCC 1 cut(s) 101
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 251
BanII GRGCYC 1 cut(s) 456
BbsI GAAGAC 1 cut(s) 1449
Bbv12I GWGCWC 2 cut(s) 456, 1174
BbvI GCAGC 2 cut(s) 499, 1474
BccI CCATC 1 cut(s) 1406
BcgI CGANNNNNNTGC 2 cut(s) 363, 397
BciT130I CCWGG 3 cut(s) 49, 99, 1335
BciVI GTATCC 1 cut(s) 336
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 1 cut(s) 1212
BcoDI GTCTC 6 cut(s) 38, 138, 309, 318, 1200, 1421
BfaI CTAG 5 cut(s) 15, 209, 462, 1047, 1181
BfmI CTRYAG 1 cut(s) 328
BfoI RGCGCY 1 cut(s) 712
BfuI GTATCC 1 cut(s) 336
BisI GCNGC 3 cut(s) 513, 707, 1488
BlpI GCTNAGC 1 cut(s) 1473
BlsI GCNGC 3 cut(s) 514, 708, 1489
BmcAI AGTACT 2 cut(s) 24, 411
Bme1390I CCNGG 4 cut(s) 49, 99, 1212, 1335
Bme18I GGWCC 1 cut(s) 101
BmeT110I CYCGRG 1 cut(s) 577
BmgT120I GGNCC 3 cut(s) 101, 188, 1194
BmiI GGNNCC 2 cut(s) 190, 1104
BmrFI CCNGG 4 cut(s) 49, 99, 1212, 1335
BmrI ACTGGG 1 cut(s) 1489
BmsI GCATC 3 cut(s) 295, 406, 808
BmuI ACTGGG 1 cut(s) 1489
BpiI GAAGAC 1 cut(s) 1449
Bpu1102I GCTNAGC 1 cut(s) 1473
Bpu14I TTCGAA 1 cut(s) 373
BpuEI CTTGAG 1 cut(s) 972
BpuMI CCSGG 1 cut(s) 1212
BsaI GGTCTC 1 cut(s) 1200
BsaJI CCNNGG 4 cut(s) 184, 246, 694, 1210
BsaWI WCCGGW 1 cut(s) 1086
BsaXI ACNNNNNCTCC 2 cut(s) 1315, 1345
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 122, 656, 1218, 1313
Bse118I RCCGGY 1 cut(s) 432
Bse1I ACTGG 2 cut(s) 347, 1495
Bse3DI GCAATG 3 cut(s) 951, 1041, 1356
BseBI CCWGG 3 cut(s) 49, 99, 1335
BseDI CCNNGG 4 cut(s) 184, 246, 694, 1210
BseGI GGATG 1 cut(s) 823
BseLI CCNNNNNNNGG 5 cut(s) 87, 122, 656, 1218, 1313
BseMI GCAATG 3 cut(s) 951, 1041, 1356
BseMII CTCAG 3 cut(s) 847, 1416, 1487
BseNI ACTGG 2 cut(s) 347, 1495
BseRI GAGGAG 2 cut(s) 866, 1336
BseSI GKGCMC 1 cut(s) 1174
BseXI GCAGC 2 cut(s) 499, 1474
BseYI CCCAGC 2 cut(s) 390, 641
BshFI GGCC 7 cut(s) 189, 213, 251, 1196, 1203, 1215, 1455
BsiHKAI GWGCWC 2 cut(s) 456, 1174
BsiHKCI CYCGRG 1 cut(s) 577
BsiSI CCGG 5 cut(s) 214, 433, 1087, 1212, 1244
BslFI GGGAC 3 cut(s) 674, 1145, 1235
BslI CCNNNNNNNGG 5 cut(s) 87, 122, 656, 1218, 1313
BsmAI GTCTC 6 cut(s) 38, 138, 309, 318, 1200, 1421
BsmFI GGGAC 3 cut(s) 674, 1145, 1235
BsnI GGCC 7 cut(s) 189, 213, 251, 1196, 1203, 1215, 1455
Bso31I GGTCTC 1 cut(s) 1200
BsoBI CYCGRG 1 cut(s) 577
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 2 cut(s) 456, 1174
Bsp143I GATC 3 cut(s) 688, 756, 1000
Bsp1720I GCTNAGC 1 cut(s) 1473
Bsp19I CCATGG 2 cut(s) 184, 246
BspACI CCGC 4 cut(s) 706, 908, 950, 1314
BspANI GGCC 7 cut(s) 189, 213, 251, 1196, 1203, 1215, 1455
BspCNI CTCAG 3 cut(s) 846, 1417, 1486
BspLI GGNNCC 2 cut(s) 190, 1104
BspPI GGATC 2 cut(s) 683, 1008
BspQI GCTCTTC 2 cut(s) 401, 987
BspT104I TTCGAA 1 cut(s) 373
BspTNI GGTCTC 1 cut(s) 1200
BsrDI GCAATG 3 cut(s) 951, 1041, 1356
BsrFI RCCGGY 1 cut(s) 432
BsrI ACTGG 2 cut(s) 347, 1495
BssAI RCCGGY 1 cut(s) 432
BssECI CCNNGG 4 cut(s) 184, 246, 694, 1210
BssMI GATC 3 cut(s) 688, 756, 1000
BssT1I CCWWGG 3 cut(s) 184, 246, 694
Bst2UI CCWGG 3 cut(s) 49, 99, 1335
Bst4CI ACNGT 3 cut(s) 27, 332, 1102
Bst6I CTCTTC 4 cut(s) 401, 630, 834, 987
BstBI TTCGAA 1 cut(s) 373
BstC8I GCNNGC 1 cut(s) 1065
BstDEI CTNAG 4 cut(s) 833, 1255, 1425, 1473
BstDSI CCRYGG 2 cut(s) 184, 246
BstF5I GGATG 1 cut(s) 823
BstH2I RGCGCY 1 cut(s) 712
BstHHI GCGC 1 cut(s) 711
BstKTI GATC 3 cut(s) 691, 759, 1003
BstMAI GTCTC 6 cut(s) 38, 138, 309, 318, 1200, 1421
BstMBI GATC 3 cut(s) 688, 756, 1000
BstNI CCWGG 3 cut(s) 49, 99, 1335
BstSCI CCNGG 4 cut(s) 47, 97, 1210, 1333
BstSFI CTRYAG 1 cut(s) 328
BstSLI GKGCMC 1 cut(s) 1174
BstV1I GCAGC 2 cut(s) 499, 1474
BstV2I GAAGAC 1 cut(s) 1449
BsuI GTATCC 1 cut(s) 336
BsuRI GGCC 7 cut(s) 189, 213, 251, 1196, 1203, 1215, 1455
BtgI CCRYGG 2 cut(s) 184, 246
BtsCI GGATG 1 cut(s) 823
BtsIMutI CAGTG 2 cut(s) 759, 841
Cac8I GCNNGC 1 cut(s) 1065
CfoI GCGC 1 cut(s) 711
Cfr10I RCCGGY 1 cut(s) 432
Cfr13I GGNCC 3 cut(s) 101, 188, 1194
Csp6I GTAC 3 cut(s) 23, 410, 1421
CviAII CATG 4 cut(s) 185, 247, 478, 1438
CviQI GTAC 3 cut(s) 23, 410, 1421
DdeI CTNAG 4 cut(s) 833, 1255, 1425, 1473
DpnI GATC 3 cut(s) 690, 758, 1002
DpnII GATC 3 cut(s) 688, 756, 1000
EaeI YGGCCR 1 cut(s) 249
Eam1104I CTCTTC 4 cut(s) 401, 630, 834, 987
EarI CTCTTC 4 cut(s) 401, 630, 834, 987
EciI GGCGGA 1 cut(s) 965
Ecl136II GAGCTC 1 cut(s) 454
Eco130I CCWWGG 3 cut(s) 184, 246, 694
Eco24I GRGCYC 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 1200
Eco47I GGWCC 1 cut(s) 101
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 1 cut(s) 909
Eco88I CYCGRG 1 cut(s) 577
EcoICRI GAGCTC 1 cut(s) 454
EcoRII CCWGG 3 cut(s) 47, 97, 1333
EcoT14I CCWWGG 3 cut(s) 184, 246, 694
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 3 cut(s) 184, 246, 694
FaeI CATG 4 cut(s) 188, 250, 481, 1441
FalI AAGNNNNNCTT 2 cut(s) 1067, 1099
FaqI GGGAC 3 cut(s) 674, 1145, 1235
FatI CATG 4 cut(s) 184, 246, 477, 1437
FauI CCCGC 1 cut(s) 901
FbaI TGATCA 1 cut(s) 756
Fnu4HI GCNGC 3 cut(s) 513, 707, 1488
FokI GGATG 1 cut(s) 830
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 3 cut(s) 513, 707, 1488
FspBI CTAG 5 cut(s) 15, 209, 462, 1047, 1181
GlaI GCGC 1 cut(s) 710
GluI GCNGC 3 cut(s) 513, 707, 1488
GsaI CCCAGC 2 cut(s) 394, 645
HaeII RGCGCY 1 cut(s) 712
HaeIII GGCC 7 cut(s) 189, 213, 251, 1196, 1203, 1215, 1455
HapII CCGG 5 cut(s) 214, 433, 1087, 1212, 1244
HhaI GCGC 1 cut(s) 711
Hin1II CATG 4 cut(s) 188, 250, 481, 1441
Hin6I GCGC 1 cut(s) 709
HinP1I GCGC 1 cut(s) 709
HindIII AAGCTT 2 cut(s) 170, 1403
HinfI GANTC 4 cut(s) 575, 749, 1050, 1326
HpaII CCGG 5 cut(s) 214, 433, 1087, 1212, 1244
Hpy166II GTNNAC 2 cut(s) 1172, 1379
Hpy188I TCNGA 2 cut(s) 266, 871
Hpy188III TCNNGA 3 cut(s) 543, 610, 989
Hpy8I GTNNAC 2 cut(s) 1172, 1379
HpyAV CCTTC 1 cut(s) 1093
HpyCH4III ACNGT 3 cut(s) 27, 332, 1102
HpyCH4V TGCA 8 cut(s) 288, 384, 448, 477, 1063, 1093, 1172, 1363
HpyF3I CTNAG 4 cut(s) 833, 1255, 1425, 1473
Hsp92II CATG 4 cut(s) 188, 250, 481, 1441
HspAI GCGC 1 cut(s) 709
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 3 cut(s) 688, 756, 1000
LguI GCTCTTC 2 cut(s) 401, 987
LmnI GCTCC 2 cut(s) 952, 1495
Lsp1109I GCAGC 2 cut(s) 499, 1474
LweI GCATC 3 cut(s) 295, 406, 808
MaeI CTAG 5 cut(s) 15, 209, 462, 1047, 1181
MalI GATC 3 cut(s) 690, 758, 1002
MboI GATC 3 cut(s) 688, 756, 1000
MhlI GDGCHC 2 cut(s) 456, 1174
MlsI TGGCCA 1 cut(s) 251
MluCI AATT 5 cut(s) 532, 652, 718, 1143, 1271
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 2 cut(s) 569, 1044
MmeI TCCRAC 2 cut(s) 750, 795
Mox20I TGGCCA 1 cut(s) 251
MscI TGGCCA 1 cut(s) 251
MseI TTAA 4 cut(s) 56, 621, 1185, 1386
MslI CAYNNNNRTG 1 cut(s) 937
Msp20I TGGCCA 1 cut(s) 251
MspI CCGG 5 cut(s) 214, 433, 1087, 1212, 1244
MspR9I CCNGG 4 cut(s) 49, 99, 1212, 1335
MvaI CCWGG 3 cut(s) 49, 99, 1335
NciI CCSGG 1 cut(s) 1212
NcoI CCATGG 2 cut(s) 184, 246
NdeII GATC 3 cut(s) 688, 756, 1000
NlaIII CATG 4 cut(s) 188, 250, 481, 1441
NlaIV GGNNCC 2 cut(s) 190, 1104
NmeAIII GCCGAG 1 cut(s) 1229
NspV TTCGAA 1 cut(s) 373
PaeR7I CTCGAG 1 cut(s) 577
PciSI GCTCTTC 2 cut(s) 401, 987
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PfeI GAWTC 2 cut(s) 749, 1326
PflMI CCANNNNNTGG 1 cut(s) 122
PkrI GCNGC 3 cut(s) 514, 708, 1489
PleI GAGTC 2 cut(s) 569, 1044
PpsI GAGTC 2 cut(s) 569, 1044
PshBI ATTAAT 1 cut(s) 621
PsiI TTATAA 1 cut(s) 827
Psp124BI GAGCTC 1 cut(s) 456
Psp6I CCWGG 3 cut(s) 47, 97, 1333
PspFI CCCAGC 2 cut(s) 390, 641
PspGI CCWGG 3 cut(s) 47, 97, 1333
PspN4I GGNNCC 2 cut(s) 190, 1104
PspPI GGNCC 3 cut(s) 101, 188, 1194
PspXI VCTCGAGB 1 cut(s) 577
RsaI GTAC 3 cut(s) 24, 411, 1422
RsaNI GTAC 3 cut(s) 23, 410, 1421
RseI CAYNNNNRTG 1 cut(s) 937
SacI GAGCTC 1 cut(s) 456
SapI GCTCTTC 2 cut(s) 401, 987
SaqAI TTAA 4 cut(s) 56, 621, 1185, 1386
SatI GCNGC 3 cut(s) 513, 707, 1488
Sau3AI GATC 3 cut(s) 688, 756, 1000
Sau96I GGNCC 3 cut(s) 101, 188, 1194
ScaI AGTACT 2 cut(s) 24, 411
SchI GAGTC 2 cut(s) 569, 1044
ScrFI CCNGG 4 cut(s) 49, 99, 1212, 1335
SduI GDGCHC 2 cut(s) 456, 1174
SfaNI GCATC 3 cut(s) 295, 406, 808
SfcI CTRYAG 1 cut(s) 328
Sfr274I CTCGAG 1 cut(s) 577
SfuI TTCGAA 1 cut(s) 373
SinI GGWCC 1 cut(s) 101
SlaI CTCGAG 1 cut(s) 577
SmiMI CAYNNNNRTG 1 cut(s) 937
SmlI CTYRAG 2 cut(s) 577, 987
SmoI CTYRAG 2 cut(s) 577, 987
Sse9I AATT 5 cut(s) 532, 652, 718, 1143, 1271
SsiI CCGC 4 cut(s) 706, 908, 950, 1314
SspMI CTAG 5 cut(s) 15, 209, 462, 1047, 1181
SstI GAGCTC 1 cut(s) 456
StyD4I CCNGG 4 cut(s) 47, 97, 1210, 1333
StyI CCWWGG 3 cut(s) 184, 246, 694
TaaI ACNGT 3 cut(s) 27, 332, 1102
TaqI TCGA 4 cut(s) 373, 542, 578, 1029
TasI AATT 5 cut(s) 532, 652, 718, 1143, 1271
TatI WGTACW 2 cut(s) 22, 409
TauI GCSGC 1 cut(s) 709
TfiI GAWTC 2 cut(s) 749, 1326
Tru1I TTAA 4 cut(s) 56, 621, 1185, 1386
Tru9I TTAA 4 cut(s) 56, 621, 1185, 1386
TscAI CASTG 2 cut(s) 759, 841
TseI GCWGC 2 cut(s) 512, 1487
TspDTI ATGAA 2 cut(s) 228, 1448
TspGWI ACGGA 1 cut(s) 1095
TspRI CASTG 2 cut(s) 759, 841
Van91I CCANNNNNTGG 1 cut(s) 122
VneI GTGCAC 1 cut(s) 1170
VpaK11BI GGWCC 1 cut(s) 101
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 1 cut(s) 652
XhoI CTCGAG 1 cut(s) 577
XspI CTAG 5 cut(s) 15, 209, 462, 1047, 1181
ZrmI AGTACT 2 cut(s) 24, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.