Rh7AG350100

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
44634254 .. 44637276
3023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG350100.1

Sequence Viewer

Length: 966 bp
ATGGATTTCTTGTCTAGTATAGTACTGTTGTGTCTCTGCTTTATCTCCTGGTTCTTAATCCAAGCCCTCCATAGAAGAACCAGAGTTAGGCTTCCACCAGGACCAAAGCCATTTCCGTTGATTGGAAATCTGTTTGAGCTTGGAGACAAACCTCATCTCTCTTTAACCAAGCTTTCCCAAAACTATGGCCCCATAATGTCTTTGAAACTAGGCCGGATAACCACTATTGTAGTTTCTTCATCAACCATGGCCAAAGAAATCCTCCGAACCAATGACCAACTCTTTTGCAACCGAACAATCCCAGATGCGTTGCGAGACATAGGAGACTACAGTTTGCCTTGGATACCAGTATCAACAAGGTGGAGAAATCTTCGAAAAATATGCACCTCCCACCTCTTCCACACCAAAGTACTTGATGCCAACCAAGAAACCCGGCGAGTGAAAGTGCAAGAGCTCATAGCTAGTGTCAATGACTGCATGGTAAAGGGTTTGGCAATAGATATTGGAAAGGCTGCTTTCAAAACTACACTCAATCTGCTGTCGAGAACTATTTTCTCAGTGGATTTGGCTGATGACTCGAGTAGTAGTAGTGAGATGACTAGAGAGTTCAAGAAGATTGTTAATGGTATCGTGGAAGAGGCTGGGAAGCCGAATTTGGGGGACTATTTTCCTGTGATTAGGAAGATTGATCCCCAAGGCATAAGGCGGCGCTTTACGAATTATTACAACAAGATGTTAGGCTTGATTGAATCAGTGATCAGTCAAAGGTTGGAATGTAGAAAAGGGGGTGATTATGTAACAAGTAATGATATGTTGGATGCTCTTATAAACCTCAGTGAAGAGAAAAATGAGGAGGATTTGAAGAACTCCGAAGTTGTTGAACATTTGTTTGTGGTTAGTTTCTACTTTCTACTCCCTATCTACTACTTTGTGTTCTTCTTGGATATTCACTTCAATGATTGCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

321

Amino Acids

36.75

Weight (kDa)

8.59

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 297 2.4e-29 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
AciI CCGC 1 cut(s) 706
AclWI GGATC 1 cut(s) 683
AcoI YGGCCR 1 cut(s) 249
AcsI RAATTY 1 cut(s) 652
AfaI GTAC 2 cut(s) 24, 411
AfiI CCNNNNNNNGG 3 cut(s) 87, 122, 656
AgsI TTSAA 7 cut(s) 205, 520, 610, 749, 862, 881, 955
AjnI CCWGG 2 cut(s) 47, 97
AjuI GAANNNNNNNTTGG 2 cut(s) 638, 670
AluBI AGCT 4 cut(s) 139, 172, 454, 461
AluI AGCT 4 cut(s) 139, 172, 454, 461
Alw21I GWGCWC 1 cut(s) 456
Alw26I GTCTC 4 cut(s) 38, 138, 309, 318
AlwI GGATC 1 cut(s) 683
Ama87I CYCGRG 1 cut(s) 577
AoxI GGCC 3 cut(s) 187, 211, 249
ApeKI GCWGC 1 cut(s) 512
ApoI RAATTY 1 cut(s) 652
AspLEI GCGC 1 cut(s) 711
AspS9I GGNCC 2 cut(s) 101, 188
AsuC2I CCSGG 1 cut(s) 433
AsuHPI GGTGA 1 cut(s) 800
AsuII TTCGAA 1 cut(s) 373
AvaI CYCGRG 1 cut(s) 577
AvaII GGWCC 1 cut(s) 101
BalI TGGCCA 1 cut(s) 251
BanII GRGCYC 1 cut(s) 456
Bbv12I GWGCWC 1 cut(s) 456
BbvI GCAGC 1 cut(s) 499
BcgI CGANNNNNNTGC 2 cut(s) 363, 397
BciT130I CCWGG 2 cut(s) 49, 99
BciVI GTATCC 1 cut(s) 336
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 1 cut(s) 433
BcoDI GTCTC 4 cut(s) 38, 138, 309, 318
BfaI CTAG 5 cut(s) 15, 209, 462, 600, 964
BfmI CTRYAG 1 cut(s) 328
BfoI RGCGCY 1 cut(s) 712
BfuI GTATCC 1 cut(s) 336
BisI GCNGC 2 cut(s) 513, 707
BlsI GCNGC 2 cut(s) 514, 708
BmcAI AGTACT 2 cut(s) 24, 411
Bme1390I CCNGG 3 cut(s) 49, 99, 433
Bme18I GGWCC 1 cut(s) 101
BmeT110I CYCGRG 1 cut(s) 577
BmgT120I GGNCC 2 cut(s) 101, 188
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 3 cut(s) 49, 99, 433
BmsI GCATC 3 cut(s) 295, 406, 808
Bpu14I TTCGAA 1 cut(s) 373
BpuMI CCSGG 1 cut(s) 433
BsaJI CCNNGG 3 cut(s) 246, 338, 694
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 122, 656
Bse1I ACTGG 1 cut(s) 347
BseBI CCWGG 2 cut(s) 49, 99
BseDI CCNNGG 3 cut(s) 246, 338, 694
BseGI GGATG 1 cut(s) 823
BseLI CCNNNNNNNGG 3 cut(s) 87, 122, 656
BseMII CTCAG 2 cut(s) 570, 847
BseNI ACTGG 1 cut(s) 347
BseRI GAGGAG 1 cut(s) 866
BseXI GCAGC 1 cut(s) 499
BseYI CCCAGC 1 cut(s) 641
BshFI GGCC 3 cut(s) 189, 213, 251
BsiHKAI GWGCWC 1 cut(s) 456
BsiHKCI CYCGRG 1 cut(s) 577
BsiSI CCGG 2 cut(s) 214, 433
BslFI GGGAC 1 cut(s) 674
BslI CCNNNNNNNGG 3 cut(s) 87, 122, 656
BsmAI GTCTC 4 cut(s) 38, 138, 309, 318
BsmFI GGGAC 1 cut(s) 674
BsnI GGCC 3 cut(s) 189, 213, 251
BsoBI CYCGRG 1 cut(s) 577
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 1 cut(s) 456
Bsp143I GATC 2 cut(s) 688, 756
Bsp19I CCATGG 1 cut(s) 246
BspACI CCGC 1 cut(s) 706
BspANI GGCC 3 cut(s) 189, 213, 251
BspCNI CTCAG 2 cut(s) 569, 846
BspLI GGNNCC 1 cut(s) 190
BspPI GGATC 1 cut(s) 683
BspT104I TTCGAA 1 cut(s) 373
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 3 cut(s) 246, 338, 694
BssMI GATC 2 cut(s) 688, 756
BssT1I CCWWGG 3 cut(s) 246, 338, 694
Bst2UI CCWGG 2 cut(s) 49, 99
Bst4CI ACNGT 2 cut(s) 27, 332
Bst6I CTCTTC 3 cut(s) 401, 630, 834
BstBI TTCGAA 1 cut(s) 373
BstDEI CTNAG 2 cut(s) 556, 833
BstDSI CCRYGG 1 cut(s) 246
BstF5I GGATG 1 cut(s) 823
BstH2I RGCGCY 1 cut(s) 712
BstHHI GCGC 1 cut(s) 711
BstKTI GATC 2 cut(s) 691, 759
BstMAI GTCTC 4 cut(s) 38, 138, 309, 318
BstMBI GATC 2 cut(s) 688, 756
BstNI CCWGG 2 cut(s) 49, 99
BstSCI CCNGG 3 cut(s) 47, 97, 431
BstSFI CTRYAG 1 cut(s) 328
BstV1I GCAGC 1 cut(s) 499
BstXI CCANNNNNNTGG 1 cut(s) 185
BsuI GTATCC 1 cut(s) 336
BsuRI GGCC 3 cut(s) 189, 213, 251
BtgI CCRYGG 1 cut(s) 246
BtsCI GGATG 1 cut(s) 823
BtsIMutI CAGTG 3 cut(s) 564, 759, 841
CfoI GCGC 1 cut(s) 711
Cfr13I GGNCC 2 cut(s) 101, 188
Csp6I GTAC 2 cut(s) 23, 410
CviAII CATG 2 cut(s) 247, 478
CviQI GTAC 2 cut(s) 23, 410
DdeI CTNAG 2 cut(s) 556, 833
DpnI GATC 2 cut(s) 690, 758
DpnII GATC 2 cut(s) 688, 756
EaeI YGGCCR 1 cut(s) 249
Eam1104I CTCTTC 3 cut(s) 401, 630, 834
EarI CTCTTC 3 cut(s) 401, 630, 834
Ecl136II GAGCTC 1 cut(s) 454
Eco130I CCWWGG 3 cut(s) 246, 338, 694
Eco24I GRGCYC 1 cut(s) 456
Eco47I GGWCC 1 cut(s) 101
Eco53kI GAGCTC 1 cut(s) 454
Eco88I CYCGRG 1 cut(s) 577
EcoICRI GAGCTC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 47, 97
EcoT14I CCWWGG 3 cut(s) 246, 338, 694
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 3 cut(s) 246, 338, 694
FaeI CATG 2 cut(s) 250, 481
FaqI GGGAC 1 cut(s) 674
FatI CATG 2 cut(s) 246, 477
FbaI TGATCA 1 cut(s) 756
Fnu4HI GCNGC 2 cut(s) 513, 707
FokI GGATG 1 cut(s) 830
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 2 cut(s) 513, 707
FspBI CTAG 5 cut(s) 15, 209, 462, 600, 964
GlaI GCGC 1 cut(s) 710
GluI GCNGC 2 cut(s) 513, 707
GsaI CCCAGC 1 cut(s) 645
HaeII RGCGCY 1 cut(s) 712
HaeIII GGCC 3 cut(s) 189, 213, 251
HapII CCGG 2 cut(s) 214, 433
HhaI GCGC 1 cut(s) 711
Hin1II CATG 2 cut(s) 250, 481
Hin6I GCGC 1 cut(s) 709
HinP1I GCGC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 2 cut(s) 575, 749
HpaII CCGG 2 cut(s) 214, 433
HphI GGTGA 1 cut(s) 800
Hpy188I TCNGA 2 cut(s) 266, 871
Hpy188III TCNNGA 2 cut(s) 543, 610
HpyCH4III ACNGT 2 cut(s) 27, 332
HpyCH4V TGCA 4 cut(s) 288, 384, 448, 477
HpyF3I CTNAG 2 cut(s) 556, 833
Hsp92II CATG 2 cut(s) 250, 481
HspAI GCGC 1 cut(s) 709
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 2 cut(s) 688, 756
Lsp1109I GCAGC 1 cut(s) 499
LweI GCATC 3 cut(s) 295, 406, 808
MaeI CTAG 5 cut(s) 15, 209, 462, 600, 964
MaeIII GTNAC 1 cut(s) 796
MalI GATC 2 cut(s) 690, 758
MboI GATC 2 cut(s) 688, 756
MhlI GDGCHC 1 cut(s) 456
MlsI TGGCCA 1 cut(s) 251
MluCI AATT 2 cut(s) 652, 718
MluNI TGGCCA 1 cut(s) 251
MlyI GAGTC 1 cut(s) 569
MmeI TCCRAC 2 cut(s) 750, 795
MnlI CCTC 9 cut(s) 77, 162, 272, 397, 404, 631, 842, 844, 847
Mox20I TGGCCA 1 cut(s) 251
MscI TGGCCA 1 cut(s) 251
MseI TTAA 3 cut(s) 56, 164, 621
MslI CAYNNNNRTG 1 cut(s) 954
Msp20I TGGCCA 1 cut(s) 251
MspI CCGG 2 cut(s) 214, 433
MspR9I CCNGG 3 cut(s) 49, 99, 433
MvaI CCWGG 2 cut(s) 49, 99
NciI CCSGG 1 cut(s) 433
NcoI CCATGG 1 cut(s) 246
NdeII GATC 2 cut(s) 688, 756
NlaIII CATG 2 cut(s) 250, 481
NlaIV GGNNCC 1 cut(s) 190
NspV TTCGAA 1 cut(s) 373
PaeR7I CTCGAG 1 cut(s) 577
PfeI GAWTC 1 cut(s) 749
PkrI GCNGC 2 cut(s) 514, 708
PleI GAGTC 1 cut(s) 569
PpsI GAGTC 1 cut(s) 569
PsiI TTATAA 1 cut(s) 827
Psp124BI GAGCTC 1 cut(s) 456
Psp6I CCWGG 2 cut(s) 47, 97
PspFI CCCAGC 1 cut(s) 641
PspGI CCWGG 2 cut(s) 47, 97
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 2 cut(s) 101, 188
PspXI VCTCGAGB 1 cut(s) 577
RsaI GTAC 2 cut(s) 24, 411
RsaNI GTAC 2 cut(s) 23, 410
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 1 cut(s) 456
SaqAI TTAA 3 cut(s) 56, 164, 621
SatI GCNGC 2 cut(s) 513, 707
Sau3AI GATC 2 cut(s) 688, 756
Sau96I GGNCC 2 cut(s) 101, 188
ScaI AGTACT 2 cut(s) 24, 411
SchI GAGTC 1 cut(s) 569
ScrFI CCNGG 3 cut(s) 49, 99, 433
SduI GDGCHC 1 cut(s) 456
SfaNI GCATC 3 cut(s) 295, 406, 808
SfcI CTRYAG 1 cut(s) 328
Sfr274I CTCGAG 1 cut(s) 577
SfuI TTCGAA 1 cut(s) 373
SinI GGWCC 1 cut(s) 101
SlaI CTCGAG 1 cut(s) 577
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 1 cut(s) 577
SmoI CTYRAG 1 cut(s) 577
Sse9I AATT 2 cut(s) 652, 718
SsiI CCGC 1 cut(s) 706
SspMI CTAG 5 cut(s) 15, 209, 462, 600, 964
SstI GAGCTC 1 cut(s) 456
StyD4I CCNGG 3 cut(s) 47, 97, 431
StyI CCWWGG 3 cut(s) 246, 338, 694
TaaI ACNGT 2 cut(s) 27, 332
TaqI TCGA 3 cut(s) 373, 542, 578
TasI AATT 2 cut(s) 652, 718
TatI WGTACW 2 cut(s) 22, 409
TauI GCSGC 1 cut(s) 709
TfiI GAWTC 1 cut(s) 749
Tru1I TTAA 3 cut(s) 56, 164, 621
Tru9I TTAA 3 cut(s) 56, 164, 621
TscAI CASTG 3 cut(s) 564, 759, 841
TseI GCWGC 1 cut(s) 512
TspDTI ATGAA 1 cut(s) 228
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 3 cut(s) 564, 759, 841
VpaK11BI GGWCC 1 cut(s) 101
XapI RAATTY 1 cut(s) 652
XhoI CTCGAG 1 cut(s) 577
XspI CTAG 5 cut(s) 15, 209, 462, 600, 964
ZrmI AGTACT 2 cut(s) 24, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.