MD13G1116100.v1.1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0000168
Physical Location & Seq
Reverse (-)
8446303 .. 8448615
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1116100.v1.1.491

Sequence Viewer

Length: 1515 bp
ATGGACTTGTTGAGTTGCATGCTATTATCTCTTATAGTCGTCTGGATCTCAATCCACGCTATCTATTATTCATTTGCAGGAAGATCGATTCCCACTAGGCTTCCACCTGGACCAAAACCATTTCCCTTCATTGGAAATCTCTTGGAGCTTGGGAACAAACCCCATCTCTCTCTCACTAACCTTTCACAACGCTATGGTCCCATTTTCACATTACATCTCGGACAAGTAACCACGGTTGTAGTTTCCTCGTCGACCGTGGCTAAGGAGGTCCTCCGAACCCATGACCAATTCTTTTGCAACCGAACCATCCCCAATGCAGTCCAAGCTCGTGACCACGCCAAGTACGGCATGCCTTGGCTACCCGTTTCAGCCGCGTGGAGAAACCTCCGCAAAATATGCAACTCGCAACTGTTCGCCAACAAAGTTCTTGACGCCAACCAAGCCAACCGTCACATAAAAGTGCAGGAACTCATATCCGAGGTCAATGAAAGCGTTGTGAAAGGTAACGCTGTTGATATTGGAAAGGCCGCTTTCAAAACTACGCTCAACTTGATGTCGCGTACCGTCTTCTCTGTGGACTTGGCAGACCCGAAGAGCGAGACGGCTAGAGAGTTTAAGGAGTTGGTTTGGAGTATTATGGAAGAGATTGGGAAGCCAAACTTGGCTGACTATTTTTCTGTGCTTAAGAAGATTGATCCCATGGGGATACGGCGTCGTTTGGCCAATCACTTCCAGAAGATGATCGACCTCTTTCACCGCATGATCACACAAAGGTTTGAGTCAAGAAAATCACGAGATTATGTCATAACAAATGATATTTTGGATACACTCATAAACATCAGTGAAGAGAAGAGTGAGGATATGGACATGGATGAAACTGAGCATCTGTTTCTGGATCTATTTGGTGCGGCCACAGATACAACTTCATCCACATTGGAATGGGCAATGGCTGAGCTATTACGCAACCCGGAAAAACTTTCCCTAGCTCAAGCAGAGCTGAAACAAATTATCGGCAAAGGAAAGCCAGTTGAGGAATCACAAATTGCTCAACTCCCTTACCTACAAGCCATAATCAAAGAAACCTTCAGATTACACCCAGTTGTTCCATTTCTAATTCCCCGAAAAGCCGAAGTTGACGTAGAAATCTGCGGGTACATTGTACCAAAGGGTGCACAAGTGCTGGTCAATGCATGGGCCATAGGGAGAGACCCCAATGTTTGGGACAACGCAAACTCGTTTATGCCGGAGAGGTTTTTAGGGTCGGAGATTGATGTTTTAGGCCGGAGCTTTGAGCTTATTCCGTTTGGTGGTGGGAGGAGAATATGCCCTGGATTGCCATTGGCAATGAGAATGTTGAGCTTGATGTTGGGTTCGCTTATTAACTCGTTTGATGATTGGAAGCTGGAAGATGGTGTTACACCGGATACCTTGAACATGGATCAGAAGTTTGGCCTTACCTTACAGAAAGCTCAGCCACTAAAAGTTGTGCCAATTTTATATAAGAACCTAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

505

Amino Acids

56.82

Weight (kDa)

7.67

Isoelectric Point (pI)

35.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 487 1.1e-107 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1218
AccI GTMKAC 1 cut(s) 251
AccII CGCG 2 cut(s) 374, 559
AciI CCGC 6 cut(s) 372, 388, 528, 757, 908, 1149
AclWI GGATC 4 cut(s) 53, 689, 903, 1446
AcoI YGGCCR 2 cut(s) 720, 909
AcuI CTGAAG 1 cut(s) 1069
AcyI GRCGYC 2 cut(s) 432, 712
AfaI GTAC 4 cut(s) 344, 562, 1154, 1161
AfiI CCNNNNNNNGG 3 cut(s) 131, 1218, 1307
AflII CTTAAG 1 cut(s) 683
AgsI TTSAA 2 cut(s) 535, 1432
AjnI CCWGG 2 cut(s) 106, 1327
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
Alw21I GWGCWC 1 cut(s) 1174
Alw26I GTCTC 2 cut(s) 593, 1200
Alw44I GTGCAC 1 cut(s) 1170
AlwI GGATC 4 cut(s) 53, 689, 903, 1446
AoxI GGCC 6 cut(s) 525, 720, 909, 1194, 1279, 1450
ApaLI GTGCAC 1 cut(s) 1170
AspS9I GGNCC 4 cut(s) 110, 197, 268, 1194
AsuC2I CCSGG 1 cut(s) 968
AsuHPI GGTGA 1 cut(s) 746
AvaII GGWCC 3 cut(s) 110, 197, 268
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 722
BauI CACGAG 2 cut(s) 327, 792
BbsI GAAGAC 1 cut(s) 559
Bbv12I GWGCWC 1 cut(s) 1174
BccI CCATC 3 cut(s) 171, 314, 1403
BceAI ACGGC 3 cut(s) 361, 618, 725
BcgI CGANNNNNNTGC 2 cut(s) 66, 100
BciT130I CCWGG 2 cut(s) 108, 1329
BciVI GTATCC 3 cut(s) 699, 817, 1417
BclI TGATCA 1 cut(s) 762
BcnI CCSGG 1 cut(s) 968
BcoDI GTCTC 2 cut(s) 593, 1200
BfaI CTAG 4 cut(s) 96, 606, 983, 1508
BfrI CTTAAG 1 cut(s) 683
BfuI GTATCC 3 cut(s) 699, 817, 1417
BisI GCNGC 3 cut(s) 372, 528, 909
BlpI GCTNAGC 2 cut(s) 951, 1470
BlsI GCNGC 3 cut(s) 373, 529, 910
Bme1390I CCNGG 3 cut(s) 108, 968, 1329
Bme18I GGWCC 3 cut(s) 110, 197, 268
BmgT120I GGNCC 4 cut(s) 110, 197, 268, 1194
BmiI GGNNCC 1 cut(s) 199
BmrFI CCNGG 3 cut(s) 108, 968, 1329
BmrI ACTGGG 1 cut(s) 1091
BmsI GCATC 1 cut(s) 892
BmuI ACTGGG 1 cut(s) 1091
BpiI GAAGAC 1 cut(s) 559
Bpu10I CCTNAGC 1 cut(s) 261
Bpu1102I GCTNAGC 2 cut(s) 951, 1470
BpuEI CTTGAG 1 cut(s) 972
BpuMI CCSGG 1 cut(s) 968
Bsa29I ATCGAT 1 cut(s) 86
BsaBI GATNNNNATC 1 cut(s) 50
BsaHI GRCGYC 2 cut(s) 432, 712
BsaI GGTCTC 1 cut(s) 1200
BsaJI CCNNGG 6 cut(s) 231, 255, 353, 477, 699, 1327
BsaWI WCCGGW 1 cut(s) 1420
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 1218, 1307
Bse1I ACTGG 2 cut(s) 1025, 1097
Bse3DI GCAATG 2 cut(s) 951, 1350
Bse8I GATNNNNATC 1 cut(s) 50
BseBI CCWGG 2 cut(s) 108, 1329
BseCI ATCGAT 1 cut(s) 86
BseDI CCNNGG 6 cut(s) 231, 255, 353, 477, 699, 1327
BseGI GGATG 3 cut(s) 306, 877, 926
BseJI GATNNNNATC 1 cut(s) 50
BseLI CCNNNNNNNGG 3 cut(s) 131, 1218, 1307
BseMI GCAATG 2 cut(s) 951, 1350
BseMII CTCAG 3 cut(s) 870, 942, 1484
BseNI ACTGG 2 cut(s) 1025, 1097
BseRI GAGGAG 1 cut(s) 1330
BseSI GKGCMC 1 cut(s) 1174
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 2 cut(s) 374, 559
Bsh1285I CGRYCG 1 cut(s) 255
BshFI GGCC 6 cut(s) 527, 722, 911, 1196, 1281, 1452
BshVI ATCGAT 1 cut(s) 86
BsiEI CGRYCG 1 cut(s) 255
BsiHKAI GWGCWC 1 cut(s) 1174
BsiSI CCGG 4 cut(s) 968, 1244, 1282, 1421
BslFI GGGAC 2 cut(s) 183, 1235
BslI CCNNNNNNNGG 3 cut(s) 131, 1218, 1307
BsmAI GTCTC 2 cut(s) 593, 1200
BsmBI CGTCTC 1 cut(s) 593
BsmFI GGGAC 2 cut(s) 183, 1235
BsnI GGCC 6 cut(s) 527, 722, 911, 1196, 1281, 1452
Bso31I GGTCTC 1 cut(s) 1200
Bsp1286I GDGCHC 1 cut(s) 1174
Bsp143I GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
Bsp1720I GCTNAGC 2 cut(s) 951, 1470
Bsp19I CCATGG 1 cut(s) 699
BspACI CCGC 6 cut(s) 372, 388, 528, 757, 908, 1149
BspANI GGCC 6 cut(s) 527, 722, 911, 1196, 1281, 1452
BspCNI CTCAG 3 cut(s) 871, 943, 1483
BspDI ATCGAT 1 cut(s) 86
BspFNI CGCG 2 cut(s) 374, 559
BspLI GGNNCC 1 cut(s) 199
BspPI GGATC 4 cut(s) 53, 689, 903, 1446
BspQI GCTCTTC 1 cut(s) 587
BspTI CTTAAG 1 cut(s) 683
BspTNI GGTCTC 1 cut(s) 1200
BsrDI GCAATG 2 cut(s) 951, 1350
BsrI ACTGG 2 cut(s) 1025, 1097
BssECI CCNNGG 6 cut(s) 231, 255, 353, 477, 699, 1327
BssMI GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
BssNI GRCGYC 2 cut(s) 432, 712
BssSI CACGAG 2 cut(s) 327, 792
BssT1I CCWWGG 2 cut(s) 353, 699
Bst2BI CACGAG 2 cut(s) 327, 792
Bst2UI CCWGG 2 cut(s) 108, 1329
Bst4CI ACNGT 5 cut(s) 235, 256, 411, 449, 565
Bst6I CTCTTC 4 cut(s) 587, 636, 840, 845
BstACI GRCGYC 2 cut(s) 432, 712
BstAFI CTTAAG 1 cut(s) 683
BstAPI GCANNNNNTGC 1 cut(s) 396
BstC8I GCNNGC 2 cut(s) 20, 350
BstDEI CTNAG 4 cut(s) 261, 879, 951, 1470
BstDSI CCRYGG 3 cut(s) 231, 255, 699
BstF5I GGATG 3 cut(s) 306, 877, 926
BstFNI CGCG 2 cut(s) 374, 559
BstKTI GATC 7 cut(s) 48, 86, 697, 744, 765, 898, 1441
BstMAI GTCTC 2 cut(s) 593, 1200
BstMBI GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
BstMCI CGRYCG 1 cut(s) 255
BstMWI GCNNNNNNNGC 3 cut(s) 323, 396, 440
BstNI CCWGG 2 cut(s) 108, 1329
BstNSI RCATGY 2 cut(s) 22, 352
BstSCI CCNGG 3 cut(s) 106, 966, 1327
BstSLI GKGCMC 1 cut(s) 1174
BstUI CGCG 2 cut(s) 374, 559
BstV2I GAAGAC 1 cut(s) 559
BstX2I RGATCY 2 cut(s) 45, 895
BstYI RGATCY 2 cut(s) 45, 895
Bsu15I ATCGAT 1 cut(s) 86
BsuI GTATCC 3 cut(s) 699, 817, 1417
BsuRI GGCC 6 cut(s) 527, 722, 911, 1196, 1281, 1452
BsuTUI ATCGAT 1 cut(s) 86
BtgI CCRYGG 3 cut(s) 231, 255, 699
BtsCI GGATG 3 cut(s) 306, 877, 926
BtsIMutI CAGTG 1 cut(s) 847
Cac8I GCNNGC 2 cut(s) 20, 350
Cfr13I GGNCC 4 cut(s) 110, 197, 268, 1194
ClaI ATCGAT 1 cut(s) 86
CseI GACGC 2 cut(s) 440, 701
Csp6I GTAC 4 cut(s) 343, 561, 1153, 1160
CviAII CATG 8 cut(s) 19, 281, 349, 700, 760, 868, 1191, 1435
CviQI GTAC 4 cut(s) 343, 561, 1153, 1160
DdeI CTNAG 4 cut(s) 261, 879, 951, 1470
DpnI GATC 7 cut(s) 47, 85, 696, 743, 764, 897, 1440
DpnII GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
EaeI YGGCCR 2 cut(s) 720, 909
Eam1104I CTCTTC 4 cut(s) 587, 636, 840, 845
EarI CTCTTC 4 cut(s) 587, 636, 840, 845
Eco130I CCWWGG 2 cut(s) 353, 699
Eco31I GGTCTC 1 cut(s) 1200
Eco47I GGWCC 3 cut(s) 110, 197, 268
Eco57I CTGAAG 1 cut(s) 1069
EcoO109I RGGNCCY 1 cut(s) 268
EcoRII CCWGG 2 cut(s) 106, 1327
EcoT14I CCWWGG 2 cut(s) 353, 699
EcoT22I ATGCAT 1 cut(s) 1192
ErhI CCWWGG 2 cut(s) 353, 699
Esp3I CGTCTC 1 cut(s) 593
FaeI CATG 8 cut(s) 22, 284, 352, 703, 763, 871, 1194, 1438
FalI AAGNNNNNCTT 2 cut(s) 644, 676
FaqI GGGAC 2 cut(s) 183, 1235
FatI CATG 8 cut(s) 18, 280, 348, 699, 759, 867, 1190, 1434
FauI CCCGC 1 cut(s) 1142
FbaI TGATCA 1 cut(s) 762
FblI GTMKAC 1 cut(s) 251
Fnu4HI GCNGC 3 cut(s) 372, 528, 909
FokI GGATG 3 cut(s) 293, 884, 913
Fsp4HI GCNGC 3 cut(s) 372, 528, 909
FspBI CTAG 4 cut(s) 96, 606, 983, 1508
GluI GCNGC 3 cut(s) 372, 528, 909
HaeIII GGCC 6 cut(s) 527, 722, 911, 1196, 1281, 1452
HapII CCGG 4 cut(s) 968, 1244, 1282, 1421
HgaI GACGC 2 cut(s) 440, 701
Hin1I GRCGYC 2 cut(s) 432, 712
Hin1II CATG 8 cut(s) 22, 284, 352, 703, 763, 871, 1194, 1438
HincII GTYRAC 2 cut(s) 252, 1135
HindII GTYRAC 2 cut(s) 252, 1135
HinfI GANTC 3 cut(s) 88, 779, 1034
HpaII CCGG 4 cut(s) 968, 1244, 1282, 1421
HphI GGTGA 1 cut(s) 746
Hpy166II GTNNAC 4 cut(s) 252, 577, 1135, 1172
Hpy188I TCNGA 6 cut(s) 221, 275, 478, 1088, 1264, 1443
Hpy188III TCNNGA 7 cut(s) 43, 329, 428, 733, 783, 792, 893
Hpy8I GTNNAC 4 cut(s) 252, 577, 1135, 1172
Hpy99I CGWCG 2 cut(s) 253, 717
HpyAV CCTTC 2 cut(s) 136, 1093
HpyCH4III ACNGT 5 cut(s) 235, 256, 411, 449, 565
HpyCH4IV ACGT 1 cut(s) 1137
HpyCH4V TGCA 8 cut(s) 18, 77, 297, 317, 399, 463, 1172, 1190
HpyF10VI GCNNNNNNNGC 3 cut(s) 323, 396, 440
HpyF3I CTNAG 4 cut(s) 261, 879, 951, 1470
HpySE526I ACGT 1 cut(s) 1137
Hsp92I GRCGYC 2 cut(s) 432, 712
Hsp92II CATG 8 cut(s) 22, 284, 352, 703, 763, 871, 1194, 1438
Ksp22I TGATCA 1 cut(s) 762
Kzo9I GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
LguI GCTCTTC 1 cut(s) 587
LmnI GCTCC 2 cut(s) 145, 1284
LweI GCATC 1 cut(s) 892
MaeI CTAG 4 cut(s) 96, 606, 983, 1508
MaeII ACGT 1 cut(s) 1137
MaeIII GTNAC 5 cut(s) 226, 329, 449, 503, 1414
MalI GATC 7 cut(s) 47, 85, 696, 743, 764, 897, 1440
MboI GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
MboII GAAGA 9 cut(s) 93, 559, 604, 653, 700, 748, 857, 862, 1418
MflI RGATCY 2 cut(s) 45, 895
MhlI GDGCHC 1 cut(s) 1174
MlsI TGGCCA 1 cut(s) 722
MluCI AATT 5 cut(s) 287, 1005, 1041, 1113, 1491
MluNI TGGCCA 1 cut(s) 722
MlyI GAGTC 1 cut(s) 788
MmeI TCCRAC 1 cut(s) 1242
Mox20I TGGCCA 1 cut(s) 722
Mph1103I ATGCAT 1 cut(s) 1192
MscI TGGCCA 1 cut(s) 722
MseI TTAA 4 cut(s) 615, 684, 1380, 1513
MslI CAYNNNNRTG 2 cut(s) 458, 937
Msp20I TGGCCA 1 cut(s) 722
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 4 cut(s) 968, 1244, 1282, 1421
MspR9I CCNGG 3 cut(s) 108, 968, 1329
MvaI CCWGG 2 cut(s) 108, 1329
MvnI CGCG 2 cut(s) 374, 559
MwoI GCNNNNNNNGC 3 cut(s) 323, 396, 440
NciI CCSGG 1 cut(s) 968
NcoI CCATGG 1 cut(s) 699
NdeII GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
NlaIII CATG 8 cut(s) 22, 284, 352, 703, 763, 871, 1194, 1438
NlaIV GGNNCC 1 cut(s) 199
NmuCI GTSAC 2 cut(s) 329, 449
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 2 cut(s) 22, 352
PaeI GCATGC 2 cut(s) 22, 352
PciSI GCTCTTC 1 cut(s) 587
PfeI GAWTC 2 cut(s) 88, 1034
PflMI CCANNNNNTGG 1 cut(s) 1218
PkrI GCNGC 3 cut(s) 373, 529, 910
PleI GAGTC 1 cut(s) 787
PpsI GAGTC 1 cut(s) 787
PpuMI RGGWCCY 1 cut(s) 268
Psp5II RGGWCCY 1 cut(s) 268
Psp6I CCWGG 2 cut(s) 106, 1327
PspGI CCWGG 2 cut(s) 106, 1327
PspN4I GGNNCC 1 cut(s) 199
PspPI GGNCC 4 cut(s) 110, 197, 268, 1194
PspPPI RGGWCCY 1 cut(s) 268
PsuI RGATCY 2 cut(s) 45, 895
RsaI GTAC 4 cut(s) 344, 562, 1154, 1161
RsaNI GTAC 4 cut(s) 343, 561, 1153, 1160
RseI CAYNNNNRTG 2 cut(s) 458, 937
SalI GTCGAC 1 cut(s) 250
SapI GCTCTTC 1 cut(s) 587
SaqAI TTAA 4 cut(s) 615, 684, 1380, 1513
SatI GCNGC 3 cut(s) 372, 528, 909
Sau3AI GATC 7 cut(s) 45, 83, 694, 741, 762, 895, 1438
Sau96I GGNCC 4 cut(s) 110, 197, 268, 1194
SchI GAGTC 1 cut(s) 788
ScrFI CCNGG 3 cut(s) 108, 968, 1329
SduI GDGCHC 1 cut(s) 1174
SfaNI GCATC 1 cut(s) 892
SinI GGWCC 3 cut(s) 110, 197, 268
SmiMI CAYNNNNRTG 2 cut(s) 458, 937
SmlI CTYRAG 2 cut(s) 683, 987
SmoI CTYRAG 2 cut(s) 683, 987
SphI GCATGC 2 cut(s) 22, 352
Sse9I AATT 5 cut(s) 287, 1005, 1041, 1113, 1491
SsiI CCGC 6 cut(s) 372, 388, 528, 757, 908, 1149
SspMI CTAG 4 cut(s) 96, 606, 983, 1508
StyD4I CCNGG 3 cut(s) 106, 966, 1327
StyI CCWWGG 2 cut(s) 353, 699
TaaI ACNGT 5 cut(s) 235, 256, 411, 449, 565
TaiI ACGT 1 cut(s) 1140
TaqI TCGA 3 cut(s) 86, 251, 744
TasI AATT 5 cut(s) 287, 1005, 1041, 1113, 1491
TauI GCSGC 3 cut(s) 374, 530, 911
TfiI GAWTC 2 cut(s) 88, 1034
Tru1I TTAA 4 cut(s) 615, 684, 1380, 1513
Tru9I TTAA 4 cut(s) 615, 684, 1380, 1513
TscAI CASTG 1 cut(s) 847
TseFI GTSAC 2 cut(s) 329, 449
Tsp45I GTSAC 2 cut(s) 329, 449
TspDTI ATGAA 5 cut(s) 60, 118, 501, 888, 915
TspGWI ACGGA 1 cut(s) 1290
TspRI CASTG 1 cut(s) 847
Van91I CCANNNNNTGG 1 cut(s) 1218
Vha464I CTTAAG 1 cut(s) 683
VneI GTGCAC 1 cut(s) 1170
VpaK11BI GGWCC 3 cut(s) 110, 197, 268
XceI RCATGY 2 cut(s) 22, 352
XmiI GTMKAC 1 cut(s) 251
XspI CTAG 4 cut(s) 96, 606, 983, 1508
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.