Rmu_ssc0000150.1_g000031

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000150.1
OG0000168
Physical Location & Seq
Reverse (-)
152186 .. 152803
618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000150.1_g000031.1.cds

Sequence Viewer

Length: 618 bp
atgagatatggatttcttgagctccatactcttatatcttggcttagcctggatctgcagccaagccaagacttgcactatttacttgcaagaagcagagccatacccagggagcttcttccacccggaccaaagccatttccatttgttggaaatctttttgagctcggaggcaaacgccatctttctttgaccaagctttgccgacgctatggccctataatcagtttgcatctaggccaagtaaccacagttgtagtttcctcatccattctagccaaagaccatcctctgaacccatggccaaatattttgcaaccgaaccgtcccagatggtgtccacgcctgcaatcacggcgagtacagcttgccctggctaccagtaatccagtatcaccaagatggagaaatcttcgcagaatatgcaattcccatttgtttgcagcaaaagttttagatgccaacagcgctagccggcgcgtaaaagtgcaacagctcattgatgatgttgatgaaagcatgagggctggtgaggcaatggacattggaagagctgctttcacaagcgtgctcaatctcttgtctaggactatcttctccatcgatttaattagctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

205

Amino Acids

23.2

Weight (kDa)

10.81

Isoelectric Point (pI)

59.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 149
AccII CGCG 1 cut(s) 480
AclWI GGATC 1 cut(s) 60
AcoI YGGCCR 1 cut(s) 302
AfaI GTAC 1 cut(s) 363
AfeI AGCGCT 1 cut(s) 469
AfiI CCNNNNNNNGG 2 cut(s) 108, 149
AjnI CCWGG 3 cut(s) 48, 107, 372
AleI CACNNNNGTG 1 cut(s) 566
AluBI AGCT 8 cut(s) 22, 115, 166, 199, 367, 496, 554, 615
AluI AGCT 8 cut(s) 22, 115, 166, 199, 367, 496, 554, 615
Alw21I GWGCWC 3 cut(s) 24, 168, 573
AlwI GGATC 1 cut(s) 60
Aor51HI AGCGCT 1 cut(s) 469
AoxI GGCC 3 cut(s) 214, 238, 302
ApeKI GCWGC 3 cut(s) 58, 443, 554
AspLEI GCGC 2 cut(s) 470, 480
AspS9I GGNCC 2 cut(s) 128, 215
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 2 cut(s) 387, 542
AsuNHI GCTAGC 1 cut(s) 470
AvaII GGWCC 1 cut(s) 128
BalI TGGCCA 1 cut(s) 304
BanII GRGCYC 2 cut(s) 24, 168
Bbv12I GWGCWC 3 cut(s) 24, 168, 573
BbvI GCAGC 3 cut(s) 70, 455, 541
BccI CCATC 5 cut(s) 189, 294, 327, 396, 608
BceAI ACGGC 1 cut(s) 371
BciT130I CCWGG 3 cut(s) 50, 109, 374
BcnI CCSGG 1 cut(s) 126
BfaI CTAG 4 cut(s) 236, 275, 471, 585
BfmI CTRYAG 1 cut(s) 56
BfoI RGCGCY 1 cut(s) 471
BisI GCNGC 3 cut(s) 59, 444, 555
BlpI GCTNAGC 1 cut(s) 44
BlsI GCNGC 3 cut(s) 60, 445, 556
Bme1390I CCNGG 4 cut(s) 50, 109, 126, 374
Bme18I GGWCC 1 cut(s) 128
BmgT120I GGNCC 2 cut(s) 128, 215
BmrFI CCNGG 4 cut(s) 50, 109, 126, 374
BmsI GCATC 2 cut(s) 241, 448
BmtI GCTAGC 1 cut(s) 474
Bpu1102I GCTNAGC 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 38
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 1 cut(s) 603
BsaJI CCNNGG 4 cut(s) 107, 108, 299, 372
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 149
Bse118I RCCGGY 1 cut(s) 474
Bse1I ACTGG 2 cut(s) 381, 389
Bse3DI GCAATG 1 cut(s) 543
BseBI CCWGG 3 cut(s) 50, 109, 374
BseCI ATCGAT 1 cut(s) 603
BseDI CCNNGG 4 cut(s) 107, 108, 299, 372
BseGI GGATG 2 cut(s) 266, 286
BseLI CCNNNNNNNGG 2 cut(s) 108, 149
BseMI GCAATG 1 cut(s) 543
BseNI ACTGG 2 cut(s) 381, 389
BseXI GCAGC 3 cut(s) 70, 455, 541
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 3 cut(s) 216, 240, 304
BshVI ATCGAT 1 cut(s) 603
BsiHKAI GWGCWC 3 cut(s) 24, 168, 573
BsiSI CCGG 2 cut(s) 126, 475
BslFI GGGAC 1 cut(s) 312
BslI CCNNNNNNNGG 2 cut(s) 108, 149
BsmFI GGGAC 1 cut(s) 312
BsnI GGCC 3 cut(s) 216, 240, 304
Bsp1286I GDGCHC 3 cut(s) 24, 168, 573
Bsp143I GATC 1 cut(s) 52
Bsp1720I GCTNAGC 1 cut(s) 44
Bsp19I CCATGG 1 cut(s) 299
BspANI GGCC 3 cut(s) 216, 240, 304
BspDI ATCGAT 1 cut(s) 603
BspFNI CGCG 1 cut(s) 480
BspMAI CTGCAG 1 cut(s) 60
BspOI GCTAGC 1 cut(s) 474
BspPI GGATC 1 cut(s) 60
BspQI GCTCTTC 1 cut(s) 544
BsrDI GCAATG 1 cut(s) 543
BsrFI RCCGGY 1 cut(s) 474
BsrI ACTGG 2 cut(s) 381, 389
BssAI RCCGGY 1 cut(s) 474
BssECI CCNNGG 4 cut(s) 107, 108, 299, 372
BssMI GATC 1 cut(s) 52
BssT1I CCWWGG 1 cut(s) 299
Bst2UI CCWGG 3 cut(s) 50, 109, 374
Bst4CI ACNGT 2 cut(s) 253, 326
Bst6I CTCTTC 1 cut(s) 544
BstAPI GCANNNNNTGC 1 cut(s) 423
BstC8I GCNNGC 5 cut(s) 347, 369, 472, 476, 569
BstDEI CTNAG 1 cut(s) 44
BstDSI CCRYGG 1 cut(s) 299
BstF5I GGATG 2 cut(s) 266, 286
BstFNI CGCG 1 cut(s) 480
BstH2I RGCGCY 1 cut(s) 471
BstHHI GCGC 2 cut(s) 470, 480
BstKTI GATC 1 cut(s) 55
BstMBI GATC 1 cut(s) 52
BstMWI GCNNNNNNNGC 5 cut(s) 355, 364, 423, 467, 533
BstNI CCWGG 3 cut(s) 50, 109, 374
BstSCI CCNGG 4 cut(s) 48, 107, 124, 372
BstSFI CTRYAG 1 cut(s) 56
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 3 cut(s) 70, 455, 541
BstX2I RGATCY 1 cut(s) 52
BstYI RGATCY 1 cut(s) 52
Bsu15I ATCGAT 1 cut(s) 603
BsuRI GGCC 3 cut(s) 216, 240, 304
BsuTUI ATCGAT 1 cut(s) 603
BtgI CCRYGG 1 cut(s) 299
BtsCI GGATG 2 cut(s) 266, 286
Cac8I GCNNGC 5 cut(s) 347, 369, 472, 476, 569
CfoI GCGC 2 cut(s) 470, 480
Cfr10I RCCGGY 1 cut(s) 474
Cfr13I GGNCC 2 cut(s) 128, 215
ClaI ATCGAT 1 cut(s) 603
CseI GACGC 1 cut(s) 216
Csp6I GTAC 1 cut(s) 362
CviAII CATG 2 cut(s) 300, 520
CviQI GTAC 1 cut(s) 362
DdeI CTNAG 1 cut(s) 44
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
EaeI YGGCCR 1 cut(s) 302
Eam1104I CTCTTC 1 cut(s) 544
EarI CTCTTC 1 cut(s) 544
Ecl136II GAGCTC 2 cut(s) 22, 166
Eco130I CCWWGG 1 cut(s) 299
Eco24I GRGCYC 2 cut(s) 24, 168
Eco47I GGWCC 1 cut(s) 128
Eco47III AGCGCT 1 cut(s) 469
Eco53kI GAGCTC 2 cut(s) 22, 166
EcoICRI GAGCTC 2 cut(s) 22, 166
EcoRII CCWGG 3 cut(s) 48, 107, 372
EcoT14I CCWWGG 1 cut(s) 299
EcoT38I GRGCYC 2 cut(s) 24, 168
ErhI CCWWGG 1 cut(s) 299
FaeI CATG 2 cut(s) 303, 523
FaiI YATR 9 cut(s) 9, 27, 35, 104, 213, 221, 301, 424, 521
FalI AAGNNNNNCTT 2 cut(s) 541, 573
FaqI GGGAC 1 cut(s) 312
FatI CATG 2 cut(s) 299, 519
Fnu4HI GCNGC 3 cut(s) 59, 444, 555
FokI GGATG 2 cut(s) 253, 273
FriOI GRGCYC 2 cut(s) 24, 168
Fsp4HI GCNGC 3 cut(s) 59, 444, 555
FspBI CTAG 4 cut(s) 236, 275, 471, 585
GlaI GCGC 2 cut(s) 469, 479
GluI GCNGC 3 cut(s) 59, 444, 555
HaeII RGCGCY 1 cut(s) 471
HaeIII GGCC 3 cut(s) 216, 240, 304
HapII CCGG 2 cut(s) 126, 475
HgaI GACGC 1 cut(s) 216
HhaI GCGC 2 cut(s) 470, 480
Hin1II CATG 2 cut(s) 303, 523
Hin6I GCGC 2 cut(s) 468, 478
HinP1I GCGC 2 cut(s) 468, 478
HindIII AAGCTT 1 cut(s) 197
HpaII CCGG 2 cut(s) 126, 475
HphI GGTGA 2 cut(s) 387, 542
Hpy166II GTNNAC 1 cut(s) 341
Hpy188I TCNGA 2 cut(s) 170, 294
Hpy188III TCNNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 341
Hpy99I CGWCG 1 cut(s) 210
HpyCH4III ACNGT 2 cut(s) 253, 326
HpyCH4V TGCA 9 cut(s) 58, 76, 89, 232, 316, 349, 426, 443, 490
HpyF10VI GCNNNNNNNGC 5 cut(s) 355, 364, 423, 467, 533
HpyF3I CTNAG 1 cut(s) 44
Hsp92II CATG 2 cut(s) 303, 523
HspAI GCGC 2 cut(s) 468, 478
KroI GCCGGC 1 cut(s) 474
KroNI GCCGGC 1 cut(s) 476
Kzo9I GATC 1 cut(s) 52
LguI GCTCTTC 1 cut(s) 544
LmnI GCTCC 2 cut(s) 27, 112
Lsp1109I GCAGC 3 cut(s) 70, 455, 541
LweI GCATC 2 cut(s) 241, 448
MaeI CTAG 4 cut(s) 236, 275, 471, 585
MaeIII GTNAC 1 cut(s) 244
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 4 cut(s) 110, 404, 561, 586
MflI RGATCY 1 cut(s) 52
MhlI GDGCHC 3 cut(s) 24, 168, 573
MlsI TGGCCA 1 cut(s) 304
MluCI AATT 2 cut(s) 427, 609
MluNI TGGCCA 1 cut(s) 304
MmeI TCCRAC 1 cut(s) 130
MnlI CCTC 5 cut(s) 164, 274, 300, 516, 526
Mox20I TGGCCA 1 cut(s) 304
MroNI GCCGGC 1 cut(s) 474
MscI TGGCCA 1 cut(s) 304
MseI TTAA 1 cut(s) 608
MslI CAYNNNNRTG 2 cut(s) 400, 566
Msp20I TGGCCA 1 cut(s) 304
MspI CCGG 2 cut(s) 126, 475
MspR9I CCNGG 4 cut(s) 50, 109, 126, 374
MvaI CCWGG 3 cut(s) 50, 109, 374
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 5 cut(s) 355, 364, 423, 467, 533
NaeI GCCGGC 1 cut(s) 476
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 299
NdeII GATC 1 cut(s) 52
NgoMIV GCCGGC 1 cut(s) 474
NheI GCTAGC 1 cut(s) 470
NlaIII CATG 2 cut(s) 303, 523
OliI CACNNNNGTG 1 cut(s) 566
PasI CCCWGGG 1 cut(s) 108
PciSI GCTCTTC 1 cut(s) 544
PdiI GCCGGC 1 cut(s) 476
PflMI CCANNNNNTGG 1 cut(s) 149
PkrI GCNGC 3 cut(s) 60, 445, 556
Psp124BI GAGCTC 2 cut(s) 24, 168
Psp6I CCWGG 3 cut(s) 48, 107, 372
PspGI CCWGG 3 cut(s) 48, 107, 372
PspPI GGNCC 2 cut(s) 128, 215
PstI CTGCAG 1 cut(s) 60
PsuI RGATCY 1 cut(s) 52
RsaI GTAC 1 cut(s) 363
RsaNI GTAC 1 cut(s) 362
RseI CAYNNNNRTG 2 cut(s) 400, 566
SacI GAGCTC 2 cut(s) 24, 168
SapI GCTCTTC 1 cut(s) 544
SaqAI TTAA 1 cut(s) 608
SatI GCNGC 3 cut(s) 59, 444, 555
Sau3AI GATC 1 cut(s) 52
Sau96I GGNCC 2 cut(s) 128, 215
ScrFI CCNGG 4 cut(s) 50, 109, 126, 374
SduI GDGCHC 3 cut(s) 24, 168, 573
SetI ASST 8 cut(s) 24, 117, 168, 201, 369, 498, 556, 617
SfaNI GCATC 2 cut(s) 241, 448
SfcI CTRYAG 1 cut(s) 56
SinI GGWCC 1 cut(s) 128
SmiMI CAYNNNNRTG 2 cut(s) 400, 566
SmlI CTYRAG 1 cut(s) 17
SmoI CTYRAG 1 cut(s) 17
Sse9I AATT 2 cut(s) 427, 609
SspI AATATT 1 cut(s) 310
SspMI CTAG 4 cut(s) 236, 275, 471, 585
SstI GAGCTC 2 cut(s) 24, 168
StyD4I CCNGG 4 cut(s) 48, 107, 124, 372
StyI CCWWGG 1 cut(s) 299
TaaI ACNGT 2 cut(s) 253, 326
TaqI TCGA 1 cut(s) 603
TasI AATT 2 cut(s) 427, 609
TatI WGTACW 1 cut(s) 361
Tru1I TTAA 1 cut(s) 608
Tru9I TTAA 1 cut(s) 608
TseI GCWGC 3 cut(s) 58, 443, 554
TspDTI ATGAA 1 cut(s) 528
Van91I CCANNNNNTGG 1 cut(s) 149
VpaK11BI GGWCC 1 cut(s) 128
XspI CTAG 4 cut(s) 236, 275, 471, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.