MD16G1116200.v1.1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000168
Physical Location & Seq
Reverse (-)
8244689 .. 8247477
2789 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1116200.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGGACATCTTGAGTTGCATACTACTAGGTCTAATGGTTGCATGGATCTCAATTTATACCCTCTATTATTCACTTGGAAGAAGATCATCAGTTACCACAAGGCTCCCACCTGGACCAAACCCACTTCCCTTCATTGGCAATCTCTTAAAGCTTGGCAACAAACCCCATCTCTCTCTCACCAAGCTTTCACAACGCTACGGCCCCATAATGGCCTTGCAACTCGGCCAAATAACGACGGTGGTAATTTCTTCATCAACCTTCGCCAAAGAAGTCCTCCGAACCCACGACCAACTCTTCTGCAACCGAACAGTCCCAGATGCGCTCCGAGCTTGTCAACATTCCACGTACGGCATGGCTTGGATACCAGTTTCAGCTGCTTGGAGAAACCTTCGCAAAACATGTAACACGCAATTGTTCGCCACCAAAATTCTCGATGCCAACCAAGCCAACCGTCACCTAAAAGTGCAAGAGCTCATATCTTACGTCAATGAAAGCGCTGTAAACGGTGAGGTGGTTGATATCGGAAGGGCTGCTTTCAAAACTTCACTCAATTTGCTGTCGCGTACAGTCTTCTCCGTGGATTTAGCGGACCCACACAGTGCGATGGCGAGAGAGTTCAAGGACTTGGTGTGGGGTATCTTTGAAGAGGCCGGGAAACCTAACTTGGCTGACTATTTTCCTGTGCTCAAAAAGATCGATCCCCTGGGAATTCGACGCCGTTTGACCGGTCACTTCCGAAAGATGCTTGACCTCTTTGACCGCTTGATGATGCAACGGTTCGAGTCAAGAAAAGCGCTTGATTATATCATGACTAATGATATGTTAGATACCCTGATAAACATTAGTGAGGAGAAAAATGAGGATATGGACATCGATGAAATTCAACATCTGCTCCTGGTTAGTTTGCTTCTTCAATATGTATGTGGGACAAATGACGTTCCACTTCTCTTTAATCGTTCATTACAGGAATTATTTGCTGCCGGAACGGATACAACATCATCCACACTGGAATGGGCAATGGCTGAGCTACTCCGCAACCCCGAAAAACTGTCAAAAGCTCAAGCGGAGCTGAAGCAGATCATCGGAAAAGGAAAACTGGTTGAGGAATCTGACGTTGCTCGACTTCCTTACTTACAAGCAATAATAAAAGAGACATTCCGTCTGTACCCAGCAGCGCCTTTACTACTTCCCCGAAAAGCCGAAACAGACGTTGAAATCGGCGGGTACGTTATACCGAAGGGTGCACAAGTGTTTGTCAATGCATGGGCCATAGGAAGAGATCCTGGAATTTGGGACAACCCGGACTCGTTCGTGCCAGAGAGGTTTCTAGGATCGGAAATTGATGTAACCGGCCAGAACTTTGAGCTTATTCCTTTTGGTGGTGGGAGGAGAATGTGTCCTGGCTGGCCATTGGCAATGAGAATGGTGAACTTGATGTTGGGTTCGCTTATTAACTGCTTCGATAAATGGAAGCTTGAAGATGGAGTTACACCAAAGACCATGAACATGGATCAGAAGTTTGGCCTCACTTTACAGAAAGCTCAACCTCTCAGAGTTGTTCCTATGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

524

Amino Acids

58.88

Weight (kDa)

8.52

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 36 - 299 4.4e-32 Cytochrome P450
p450 PF00067 321 - 513 1.7e-66 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 562
AciI CCGC 5 cut(s) 587, 760, 1033, 1064, 1221
AclWI GGATC 5 cut(s) 53, 692, 1274, 1339, 1518
AcoI YGGCCR 3 cut(s) 223, 1351, 1406
AcsI RAATTY 4 cut(s) 426, 708, 879, 1287
AcuI CTGAAG 1 cut(s) 1091
AcyI GRCGYC 1 cut(s) 715
AdeI CACNNNGTG 1 cut(s) 599
AfaI GTAC 4 cut(s) 347, 565, 1166, 1226
AfeI AGCGCT 2 cut(s) 496, 795
AfiI CCNNNNNNNGG 3 cut(s) 134, 208, 1379
AflIII ACRYGT 1 cut(s) 398
AgeI ACCGGT 1 cut(s) 725
AgsI TTSAA 7 cut(s) 538, 619, 644, 884, 914, 1214, 1478
AhdI GACNNNNNGTC 1 cut(s) 1158
AjnI CCWGG 5 cut(s) 109, 702, 894, 1282, 1399
AjuI GAANNNNNNNTTGG 4 cut(s) 647, 679, 1421, 1453
Alw21I GWGCWC 3 cut(s) 474, 687, 1246
Alw26I GTCTC 1 cut(s) 1145
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 5 cut(s) 53, 692, 1274, 1339, 1518
Aor51HI AGCGCT 2 cut(s) 496, 795
AoxI GGCC 8 cut(s) 199, 210, 223, 648, 1266, 1351, 1406, 1522
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 4 cut(s) 374, 530, 977, 1172
ApoI RAATTY 4 cut(s) 426, 708, 879, 1287
AsiGI ACCGGT 1 cut(s) 725
AspLEI GCGC 4 cut(s) 322, 497, 796, 1177
AspS9I GGNCC 4 cut(s) 113, 200, 589, 1266
AsuC2I CCSGG 2 cut(s) 652, 1301
AsuHPI GGTGA 4 cut(s) 169, 446, 518, 1438
AvaII GGWCC 2 cut(s) 113, 589
BaeGI GKGCMC 1 cut(s) 1246
BalI TGGCCA 1 cut(s) 1408
BanII GRGCYC 1 cut(s) 474
BbsI GAAGAC 1 cut(s) 562
Bbv12I GWGCWC 3 cut(s) 474, 687, 1246
BbvI GCAGC 4 cut(s) 361, 517, 964, 1184
BccI CCATC 3 cut(s) 174, 598, 1475
BceAI ACGGC 3 cut(s) 214, 364, 702
BciT130I CCWGG 5 cut(s) 111, 704, 896, 1284, 1401
BciVI GTATCC 2 cut(s) 354, 982
BcnI CCSGG 2 cut(s) 652, 1301
BcoDI GTCTC 1 cut(s) 1145
BfaI CTAG 2 cut(s) 26, 1328
BfoI RGCGCY 3 cut(s) 498, 797, 1178
BfuI GTATCC 2 cut(s) 354, 982
BisI GCNGC 4 cut(s) 375, 531, 978, 1173
BlpI GCTNAGC 1 cut(s) 1023
BlsI GCNGC 4 cut(s) 376, 532, 979, 1174
Bme1390I CCNGG 7 cut(s) 111, 652, 704, 896, 1284, 1301, 1401
Bme18I GGWCC 2 cut(s) 113, 589
BmeRI GACNNNNNGTC 1 cut(s) 1158
BmgT120I GGNCC 4 cut(s) 113, 200, 589, 1266
BmiI GGNNCC 3 cut(s) 104, 202, 591
BmrFI CCNGG 7 cut(s) 111, 652, 704, 896, 1284, 1301, 1401
BmsI GCATC 4 cut(s) 307, 424, 732, 759
BpiI GAAGAC 1 cut(s) 562
Bpu1102I GCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 2 cut(s) 31, 1044
BpuMI CCSGG 2 cut(s) 652, 1301
Bsa29I ATCGAT 2 cut(s) 696, 873
BsaAI YACGTR 1 cut(s) 345
BsaHI GRCGYC 1 cut(s) 715
BsaJI CCNNGG 3 cut(s) 576, 702, 703
BsaWI WCCGGW 1 cut(s) 725
BsaXI ACNNNNNCTCC 4 cut(s) 876, 906, 1381, 1411
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 208, 1379
Bse118I RCCGGY 2 cut(s) 725, 1349
Bse1I ACTGG 3 cut(s) 365, 1011, 1101
Bse3DI GCAATG 2 cut(s) 1023, 1422
BseBI CCWGG 5 cut(s) 111, 704, 896, 1284, 1401
BseCI ATCGAT 2 cut(s) 696, 873
BseDI CCNNGG 3 cut(s) 576, 702, 703
BseGI GGATG 1 cut(s) 998
BseLI CCNNNNNNNGG 3 cut(s) 134, 208, 1379
BseMI GCAATG 2 cut(s) 1023, 1422
BseMII CTCAG 2 cut(s) 1014, 1564
BseNI ACTGG 3 cut(s) 365, 1011, 1101
BseRI GAGGAG 2 cut(s) 863, 1402
BseSI GKGCMC 1 cut(s) 1246
BseXI GCAGC 4 cut(s) 361, 517, 964, 1184
BseYI CCCAGC 1 cut(s) 1168
Bsh1236I CGCG 1 cut(s) 562
BshFI GGCC 8 cut(s) 201, 212, 225, 650, 1268, 1353, 1408, 1524
BshTI ACCGGT 1 cut(s) 725
BshVI ATCGAT 2 cut(s) 696, 873
BsiHKAI GWGCWC 3 cut(s) 474, 687, 1246
BsiSI CCGG 5 cut(s) 651, 726, 981, 1301, 1350
BsiWI CGTACG 1 cut(s) 345
BslFI GGGAC 3 cut(s) 296, 940, 1307
BslI CCNNNNNNNGG 3 cut(s) 134, 208, 1379
BsmAI GTCTC 1 cut(s) 1145
BsmFI GGGAC 3 cut(s) 296, 940, 1307
BsnI GGCC 8 cut(s) 201, 212, 225, 650, 1268, 1353, 1408, 1524
Bsp1286I GDGCHC 3 cut(s) 474, 687, 1246
Bsp143I GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
Bsp1720I GCTNAGC 1 cut(s) 1023
BspACI CCGC 5 cut(s) 587, 760, 1033, 1064, 1221
BspANI GGCC 8 cut(s) 201, 212, 225, 650, 1268, 1353, 1408, 1524
BspCNI CTCAG 2 cut(s) 1015, 1563
BspDI ATCGAT 2 cut(s) 696, 873
BspFNI CGCG 1 cut(s) 562
BspHI TCATGA 1 cut(s) 807
BspLI GGNNCC 3 cut(s) 104, 202, 591
BspPI GGATC 5 cut(s) 53, 692, 1274, 1339, 1518
BsrDI GCAATG 2 cut(s) 1023, 1422
BsrFI RCCGGY 2 cut(s) 725, 1349
BsrI ACTGG 3 cut(s) 365, 1011, 1101
BssAI RCCGGY 2 cut(s) 725, 1349
BssECI CCNNGG 3 cut(s) 576, 702, 703
BssMI GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
BssNI GRCGYC 1 cut(s) 715
Bst2UI CCWGG 5 cut(s) 111, 704, 896, 1284, 1401
Bst4CI ACNGT 8 cut(s) 238, 310, 452, 506, 568, 599, 777, 1050
Bst6I CTCTTC 3 cut(s) 299, 639, 1270
BstACI GRCGYC 1 cut(s) 715
BstBAI YACGTR 1 cut(s) 345
BstC8I GCNNGC 1 cut(s) 1406
BstDEI CTNAG 2 cut(s) 1023, 1550
BstDSI CCRYGG 1 cut(s) 576
BstF5I GGATG 1 cut(s) 998
BstFNI CGCG 1 cut(s) 562
BstH2I RGCGCY 3 cut(s) 498, 797, 1178
BstHHI GCGC 4 cut(s) 322, 497, 796, 1177
BstKTI GATC 8 cut(s) 48, 86, 696, 700, 1080, 1282, 1334, 1513
BstMAI GTCTC 1 cut(s) 1145
BstMBI GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
BstMWI GCNNNNNNNGC 2 cut(s) 326, 443
BstNI CCWGG 5 cut(s) 111, 704, 896, 1284, 1401
BstNSI RCATGY 1 cut(s) 402
BstSCI CCNGG 7 cut(s) 109, 650, 702, 894, 1282, 1299, 1399
BstSLI GKGCMC 1 cut(s) 1246
BstUI CGCG 1 cut(s) 562
BstV1I GCAGC 4 cut(s) 361, 517, 964, 1184
BstV2I GAAGAC 1 cut(s) 562
BstX2I RGATCY 2 cut(s) 45, 1279
BstXI CCANNNNNNTGG 1 cut(s) 1507
BstYI RGATCY 2 cut(s) 45, 1279
Bsu15I ATCGAT 2 cut(s) 696, 873
BsuI GTATCC 2 cut(s) 354, 982
BsuRI GGCC 8 cut(s) 201, 212, 225, 650, 1268, 1353, 1408, 1524
BsuTUI ATCGAT 2 cut(s) 696, 873
BtgI CCRYGG 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 617
BtsCI GGATG 1 cut(s) 998
BtsIMutI CAGTG 2 cut(s) 604, 1004
Cac8I GCNNGC 1 cut(s) 1406
CciI TCATGA 1 cut(s) 807
CfoI GCGC 4 cut(s) 322, 497, 796, 1177
Cfr10I RCCGGY 2 cut(s) 725, 1349
Cfr13I GGNCC 4 cut(s) 113, 200, 589, 1266
ClaI ATCGAT 2 cut(s) 696, 873
CseI GACGC 1 cut(s) 723
Csp6I GTAC 4 cut(s) 346, 564, 1165, 1225
CspAI ACCGGT 1 cut(s) 725
CviAII CATG 7 cut(s) 42, 352, 399, 808, 1263, 1501, 1507
CviQI GTAC 4 cut(s) 346, 564, 1165, 1225
DdeI CTNAG 2 cut(s) 1023, 1550
DpnI GATC 8 cut(s) 47, 85, 695, 699, 1079, 1281, 1333, 1512
DpnII GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
DraIII CACNNNGTG 1 cut(s) 599
DriI GACNNNNNGTC 1 cut(s) 1158
EaeI YGGCCR 3 cut(s) 223, 1351, 1406
Eam1104I CTCTTC 3 cut(s) 299, 639, 1270
Eam1105I GACNNNNNGTC 1 cut(s) 1158
EarI CTCTTC 3 cut(s) 299, 639, 1270
Ecl136II GAGCTC 1 cut(s) 472
Eco24I GRGCYC 1 cut(s) 474
Eco32I GATATC 1 cut(s) 520
Eco47I GGWCC 2 cut(s) 113, 589
Eco47III AGCGCT 2 cut(s) 496, 795
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 1 cut(s) 1091
EcoICRI GAGCTC 1 cut(s) 472
EcoRI GAATTC 1 cut(s) 708
EcoRII CCWGG 5 cut(s) 109, 702, 894, 1282, 1399
EcoRV GATATC 1 cut(s) 520
EcoT22I ATGCAT 1 cut(s) 1264
EcoT38I GRGCYC 1 cut(s) 474
FaeI CATG 7 cut(s) 45, 355, 402, 811, 1266, 1504, 1510
FalI AAGNNNNNCTT 2 cut(s) 517, 549
FaqI GGGAC 3 cut(s) 296, 940, 1307
FatI CATG 7 cut(s) 41, 351, 398, 807, 1262, 1500, 1506
FauI CCCGC 1 cut(s) 1214
Fnu4HI GCNGC 4 cut(s) 375, 531, 978, 1173
FokI GGATG 1 cut(s) 985
FriOI GRGCYC 1 cut(s) 474
Fsp4HI GCNGC 4 cut(s) 375, 531, 978, 1173
FspBI CTAG 2 cut(s) 26, 1328
GlaI GCGC 4 cut(s) 321, 496, 795, 1176
GluI GCNGC 4 cut(s) 375, 531, 978, 1173
GsaI CCCAGC 1 cut(s) 1172
HaeII RGCGCY 3 cut(s) 498, 797, 1178
HaeIII GGCC 8 cut(s) 201, 212, 225, 650, 1268, 1353, 1408, 1524
HapII CCGG 5 cut(s) 651, 726, 981, 1301, 1350
HgaI GACGC 1 cut(s) 723
HhaI GCGC 4 cut(s) 322, 497, 796, 1177
Hin1I GRCGYC 1 cut(s) 715
Hin1II CATG 7 cut(s) 45, 355, 402, 811, 1266, 1504, 1510
Hin6I GCGC 4 cut(s) 320, 495, 794, 1175
HinP1I GCGC 4 cut(s) 320, 495, 794, 1175
HincII GTYRAC 1 cut(s) 335
HindII GTYRAC 1 cut(s) 335
HindIII AAGCTT 3 cut(s) 149, 182, 1472
HinfI GANTC 3 cut(s) 782, 1106, 1304
HpaII CCGG 5 cut(s) 651, 726, 981, 1301, 1350
HphI GGTGA 4 cut(s) 169, 446, 518, 1438
Hpy166II GTNNAC 4 cut(s) 335, 502, 1244, 1429
Hpy188I TCNGA 9 cut(s) 278, 326, 524, 737, 1085, 1111, 1336, 1515, 1553
Hpy188III TCNNGA 4 cut(s) 10, 431, 786, 808
Hpy8I GTNNAC 4 cut(s) 335, 502, 1244, 1429
Hpy99I CGWCG 2 cut(s) 238, 717
HpyAV CCTTC 5 cut(s) 139, 268, 398, 519, 1231
HpyCH4III ACNGT 8 cut(s) 238, 310, 452, 506, 568, 599, 777, 1050
HpyCH4IV ACGT 6 cut(s) 344, 483, 936, 1113, 1209, 1227
HpyCH4V TGCA 8 cut(s) 18, 41, 217, 300, 466, 772, 1244, 1262
HpyF10VI GCNNNNNNNGC 2 cut(s) 326, 443
HpyF3I CTNAG 2 cut(s) 1023, 1550
HpySE526I ACGT 6 cut(s) 344, 483, 936, 1113, 1209, 1227
Hsp92I GRCGYC 1 cut(s) 715
Hsp92II CATG 7 cut(s) 45, 355, 402, 811, 1266, 1504, 1510
HspAI GCGC 4 cut(s) 320, 495, 794, 1175
Kzo9I GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
LmnI GCTCC 4 cut(s) 108, 327, 897, 1066
Lsp1109I GCAGC 4 cut(s) 361, 517, 964, 1184
LweI GCATC 4 cut(s) 307, 424, 732, 759
MaeI CTAG 2 cut(s) 26, 1328
MaeII ACGT 6 cut(s) 344, 483, 936, 1113, 1209, 1227
MaeIII GTNAC 6 cut(s) 91, 401, 452, 728, 1345, 1486
MalI GATC 8 cut(s) 47, 85, 695, 699, 1079, 1281, 1333, 1512
MboI GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
MboII GAAGA 9 cut(s) 90, 93, 240, 286, 562, 656, 902, 1287, 1490
MfeI CAATTG 1 cut(s) 410
MflI RGATCY 2 cut(s) 45, 1279
MhlI GDGCHC 3 cut(s) 474, 687, 1246
MlsI TGGCCA 1 cut(s) 1408
MluNI TGGCCA 1 cut(s) 1408
MlyI GAGTC 2 cut(s) 791, 1298
Mox20I TGGCCA 1 cut(s) 1408
Mph1103I ATGCAT 1 cut(s) 1264
MscI TGGCCA 1 cut(s) 1408
MseI TTAA 3 cut(s) 146, 951, 1452
MslI CAYNNNNRTG 2 cut(s) 1009, 1505
Msp20I TGGCCA 1 cut(s) 1408
MspA1I CMGCKG 1 cut(s) 374
MspI CCGG 5 cut(s) 651, 726, 981, 1301, 1350
MspR9I CCNGG 7 cut(s) 111, 652, 704, 896, 1284, 1301, 1401
MunI CAATTG 1 cut(s) 410
MvaI CCWGG 5 cut(s) 111, 704, 896, 1284, 1401
MvnI CGCG 1 cut(s) 562
MwoI GCNNNNNNNGC 2 cut(s) 326, 443
NciI CCSGG 2 cut(s) 652, 1301
NdeII GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
NlaIII CATG 7 cut(s) 45, 355, 402, 811, 1266, 1504, 1510
NlaIV GGNNCC 3 cut(s) 104, 202, 591
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 2 cut(s) 452, 728
NsiI ATGCAT 1 cut(s) 1264
NspI RCATGY 1 cut(s) 402
PagI TCATGA 1 cut(s) 807
PasI CCCWGGG 1 cut(s) 703
PciI ACATGT 1 cut(s) 398
PcsI WCGNNNNNNNCGW 1 cut(s) 1224
PfeI GAWTC 1 cut(s) 1106
Pfl23II CGTACG 1 cut(s) 345
PfoI TCCNGGA 1 cut(s) 1282
PinAI ACCGGT 1 cut(s) 725
PkrI GCNGC 4 cut(s) 376, 532, 979, 1174
PleI GAGTC 2 cut(s) 790, 1298
PpsI GAGTC 2 cut(s) 790, 1298
Ppu21I YACGTR 1 cut(s) 345
PscI ACATGT 1 cut(s) 398
Psp124BI GAGCTC 1 cut(s) 474
Psp6I CCWGG 5 cut(s) 109, 702, 894, 1282, 1399
PspFI CCCAGC 1 cut(s) 1168
PspGI CCWGG 5 cut(s) 109, 702, 894, 1282, 1399
PspLI CGTACG 1 cut(s) 345
PspN4I GGNNCC 3 cut(s) 104, 202, 591
PspPI GGNCC 4 cut(s) 113, 200, 589, 1266
PsuI RGATCY 2 cut(s) 45, 1279
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 4 cut(s) 347, 565, 1166, 1226
RsaNI GTAC 4 cut(s) 346, 564, 1165, 1225
RseI CAYNNNNRTG 2 cut(s) 1009, 1505
SacI GAGCTC 1 cut(s) 474
SaqAI TTAA 3 cut(s) 146, 951, 1452
SatI GCNGC 4 cut(s) 375, 531, 978, 1173
Sau3AI GATC 8 cut(s) 45, 83, 693, 697, 1077, 1279, 1331, 1510
Sau96I GGNCC 4 cut(s) 113, 200, 589, 1266
SchI GAGTC 2 cut(s) 791, 1298
ScrFI CCNGG 7 cut(s) 111, 652, 704, 896, 1284, 1301, 1401
SduI GDGCHC 3 cut(s) 474, 687, 1246
SfaNI GCATC 4 cut(s) 307, 424, 732, 759
SinI GGWCC 2 cut(s) 113, 589
SmiMI CAYNNNNRTG 2 cut(s) 1009, 1505
SmlI CTYRAG 2 cut(s) 10, 1059
SmoI CTYRAG 2 cut(s) 10, 1059
SsiI CCGC 5 cut(s) 587, 760, 1033, 1064, 1221
SspMI CTAG 2 cut(s) 26, 1328
SstI GAGCTC 1 cut(s) 474
StyD4I CCNGG 7 cut(s) 109, 650, 702, 894, 1282, 1299, 1399
TaaI ACNGT 8 cut(s) 238, 310, 452, 506, 568, 599, 777, 1050
TaiI ACGT 6 cut(s) 347, 486, 939, 1116, 1212, 1230
TaqI TCGA 7 cut(s) 432, 696, 712, 780, 873, 1120, 1461
TfiI GAWTC 1 cut(s) 1106
Tru1I TTAA 3 cut(s) 146, 951, 1452
Tru9I TTAA 3 cut(s) 146, 951, 1452
TscAI CASTG 2 cut(s) 604, 1011
TseFI GTSAC 2 cut(s) 452, 728
TseI GCWGC 4 cut(s) 374, 530, 977, 1172
Tsp45I GTSAC 2 cut(s) 452, 728
TspDTI ATGAA 6 cut(s) 121, 240, 504, 891, 948, 1517
TspGWI ACGGA 3 cut(s) 565, 1001, 1148
TspRI CASTG 2 cut(s) 604, 1011
VneI GTGCAC 1 cut(s) 1242
VpaK11BI GGWCC 2 cut(s) 113, 589
XapI RAATTY 4 cut(s) 426, 708, 879, 1287
XceI RCATGY 1 cut(s) 402
XcmI CCANNNNNNNNNTGG 1 cut(s) 349
XspI CTAG 2 cut(s) 26, 1328
Zsp2I ATGCAT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.