Rh7CG332600

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
36829315 .. 36830731
1417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG332600.1

Sequence Viewer

Length: 489 bp
ATGGCTTGGCTTCCCGTATCAGCAAGATGGAGAAATCTTCGTACAATATGCAACTTGCAATTGTTTGCCCGCAAAGTTCTTGATGCTAACCAAGCCAAACGGAGGGTAAAGGTGCAAAAGCTCATAGACGATGTCAATGAAAGCATGAGGGCCGGTGAGGCAGTGGATATCGGAAGGGCTGCTTTCCCAACCACACTCAATCTGTTGTCACAGACTATCTTCTCTGTGGATTTAGCTGACCCGAGTAGTGAGACAACTAGGGAGTTCAAGGAGACTGTTTGGGGTATGATGGAAGAGATAGGAAAACCAAACTTGGCGGATTATTTTCCTTTTCTTAGGAAGCTTGATCCGCAAGGCATAAGGCGGCGCTTGACCCATTACTTCCAAATTACAGTAGACATGTTTGATCGAATGATCCATCAAAGAGAAAATGGAGGATATGGACGTGCCCGAAACTCAACATTTATTTCTGGATCTATTTGCTGCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

162

Amino Acids

18.66

Weight (kDa)

9.55

Isoelectric Point (pI)

42.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 7 - 143 7.6e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000168)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61035 AT3G61035 AT3G61035 AT3G61035
fragaria_vesca FvH4_4g24041 FvH4_4g24050 FvH4_4g24050 FvH4_4g24052 FvH4_4g24053 FvH4_4g24060 FvH4_4g24060 FvH4_4g24070 FvH4_4g24080 FvH4_4g24230 FvH4_4g24640 FvH4_4g27900
malus_domestica MD06G1131200.v1.1 MD07G1012100.v1.1 MD12G1099200.v1.1 MD13G1115700.v1.1 MD13G1116100.v1.1 MD16G1115800.v1.1 MD16G1115900.v1.1 MD16G1116200.v1.1 MD16G1116300.v1.1
prunus_persica Prupe.1G229900_v2.0.a1 Prupe.1G230300_v2.0.a1 Prupe.1G230500_v2.0.a1 Prupe.1G230600_v2.0.a1 Prupe.1G230800_v2.0.a1 Prupe.1G230900_v2.0.a1 Prupe.1G231000_v2.0.a1 Prupe.1G231300_v2.0.a1 Prupe.1G231400_v2.0.a1 Prupe.6G237700_v2.0.a1
pyrus_communis pycom13g09840 pycom13g10020 pycom13g10040 pycom13g10080 pycom13g16060 pycom13g16080 pycom13g16090 pycom16g09820 pycom16g09830 pycom16g09860 pycom16g09870 pycom16g09880 pycom16g09920
rosa_chinensis RchiOBHm_Chr4g0417141 RchiOBHm_Chr4g0430071 RchiOBHm_Chr4g0430761 RchiOBHm_Chr4g0430771 RchiOBHm_Chr4g0430801 RchiOBHm_Chr4g0430821 RchiOBHm_Chr4g0430841 RchiOBHm_Chr4g0430851 RchiOBHm_Chr4g0431011 RchiOBHm_Chr4g0431021 RchiOBHm_Chr4g0431631 RchiOBHm_Chr4g0431641 RchiOBHm_Chr4g0431651 RchiOBHm_Chr4g0431661 RchiOBHm_Chr4g0431751 RchiOBHm_Chr7g0218001 RchiOBHm_Chr7g0218961 RchiOBHm_Chr7g0222351
rosa_laevigata RLG00000002068 RLG00000002315 RLG00000006893 RLG00000006900 RLG00000006902 RLG00000006934 RLG00000006946 RLG00000006947 RLG00000006949 RLG00000006951 RLG00000007006 RLG00000007007 RLG00000007928 RLG00000008331
rosa_multiflora Rmu_co8203018.1_g000001 Rmu_co8382437.1_g000001 Rmu_co8416363.1_g000001 Rmu_co8420493.1_g000001 Rmu_sc0000131.1_g000002 Rmu_sc0000289.1_g000009 Rmu_sc0001459.1_g000023 Rmu_sc0002620.1_g000010 Rmu_sc0002620.1_g000015 Rmu_sc0002620.1_g000019 Rmu_sc0003823.1_g000013 Rmu_sc0006263.1_g000004 Rmu_sc0007069.1_g000002 Rmu_sc0008769.1_g000020 Rmu_sc0009082.1_g000005 Rmu_sc0009440.1_g000005 Rmu_sc0016424.1_g000002 Rmu_sc0017974.1_g000003 Rmu_sc0023197.1_g000002 Rmu_sc0030497.1_g000002 Rmu_ssc0000150.1_g000031 Rmu_ssc0000340.1_g000006 Rmu_ssc0000487.1_g000004
rosa_roxburghii Rroxscaffold_3G00237050 Rroxscaffold_3G00240290 Rroxscaffold_4G00308920 Rroxscaffold_5G00360950 Rroxscaffold_5G00371870 Rroxscaffold_5G00371880 Rroxscaffold_5G00372470 Rroxscaffold_5G00372500 Rroxscaffold_5G00372510 Rroxscaffold_5G00372520 Rroxscaffold_5G00373090
rosa_rugosa Rorug01G0177500 Rorug03G0283700 Rorug04G0073600 Rorug04G0239800 Rorug04G0245700 Rorug04G0245800 Rorug04G0245800 Rorug04G0245900 Rorug04G0251500 Rorug04G0251600 Rorug04G0252200 Rorug07G0180200 Rorug07G0207700
rosa_samantha Rh4AG208700 Rh4AG296900 Rh4AG301700 Rh4AG301900 Rh4AG302000 Rh4AG302100 Rh4AG302200 Rh4AG304200 Rh4AG308200 Rh4AG308500 Rh4BG167800 Rh4BG205800 Rh4BG303400 Rh4BG309700 Rh4BG309800 Rh4BG310000 Rh4BG310100 Rh4BG310200 Rh4BG310300 Rh4BG315800 Rh4BG316300 Rh4CG219700 Rh4CG318900 Rh4CG326300 Rh4CG326400 Rh4CG326500 Rh4CG326600 Rh4CG331300 Rh7AG315200 Rh7AG323400 Rh7AG350100 Rh7BG314600 Rh7BG339700 Rh7CG332600 Rh7CG340200 Rh7CG340300 Rh7CG367600
rosa_wichuraiana Rw0G015620 Rw4G017690 Rw4G025740 Rw4G026220 Rw4G026240 Rw4G026260 Rw4G026720 Rw4G026730 Rw4G026830 Rw7G027400 Rw7G029550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 396
AciI CCGC 4 cut(s) 70, 317, 350, 364
AclWI GGATC 3 cut(s) 341, 409, 481
AfaI GTAC 1 cut(s) 43
AfiI CCNNNNNNNGG 1 cut(s) 102
AflIII ACRYGT 1 cut(s) 399
AgsI TTSAA 1 cut(s) 268
AjiI CACGTC 1 cut(s) 446
AluBI AGCT 3 cut(s) 121, 236, 343
AluI AGCT 3 cut(s) 121, 236, 343
Alw26I GTCTC 2 cut(s) 245, 266
AlwI GGATC 3 cut(s) 341, 409, 481
Ama87I CYCGRG 1 cut(s) 241
AoxI GGCC 1 cut(s) 150
ApeKI GCWGC 2 cut(s) 179, 483
AspLEI GCGC 1 cut(s) 369
AspS9I GGNCC 1 cut(s) 150
AsuHPI GGTGA 1 cut(s) 167
AvaI CYCGRG 1 cut(s) 241
BaeGI GKGCMC 1 cut(s) 451
BbvI GCAGC 2 cut(s) 166, 470
BccI CCATC 3 cut(s) 21, 283, 426
BcoDI GTCTC 2 cut(s) 245, 266
BfaI CTAG 2 cut(s) 258, 487
BfoI RGCGCY 1 cut(s) 370
BglI GCCNNNNNGGC 1 cut(s) 158
BisI GCNGC 3 cut(s) 180, 365, 484
BlsI GCNGC 3 cut(s) 181, 366, 485
BmeT110I CYCGRG 1 cut(s) 241
BmgBI CACGTC 1 cut(s) 446
BmgT120I GGNCC 1 cut(s) 150
BmsI GCATC 1 cut(s) 73
Bsc4I CCNNNNNNNGG 1 cut(s) 102
Bse118I RCCGGY 1 cut(s) 152
BseLI CCNNNNNNNGG 1 cut(s) 102
BseSI GKGCMC 1 cut(s) 451
BseXI GCAGC 2 cut(s) 166, 470
BshFI GGCC 1 cut(s) 152
BsiHKCI CYCGRG 1 cut(s) 241
BsiSI CCGG 1 cut(s) 153
BslI CCNNNNNNNGG 1 cut(s) 102
BsmAI GTCTC 2 cut(s) 245, 266
BsnI GGCC 1 cut(s) 152
BsoBI CYCGRG 1 cut(s) 241
Bsp1286I GDGCHC 1 cut(s) 451
Bsp143I GATC 4 cut(s) 346, 406, 414, 473
BspACI CCGC 4 cut(s) 70, 317, 350, 364
BspANI GGCC 1 cut(s) 152
BspPI GGATC 3 cut(s) 341, 409, 481
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssMI GATC 4 cut(s) 346, 406, 414, 473
Bst4CI ACNGT 2 cut(s) 277, 394
Bst6I CTCTTC 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 70
BstDEI CTNAG 1 cut(s) 335
BstH2I RGCGCY 1 cut(s) 370
BstHHI GCGC 1 cut(s) 369
BstKTI GATC 4 cut(s) 349, 409, 417, 476
BstMAI GTCTC 2 cut(s) 245, 266
BstMBI GATC 4 cut(s) 346, 406, 414, 473
BstMWI GCNNNNNNNGC 3 cut(s) 92, 158, 349
BstNSI RCATGY 1 cut(s) 403
BstSLI GKGCMC 1 cut(s) 451
BstV1I GCAGC 2 cut(s) 166, 470
BstX2I RGATCY 1 cut(s) 473
BstYI RGATCY 1 cut(s) 473
BsuRI GGCC 1 cut(s) 152
BtrI CACGTC 1 cut(s) 446
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 1 cut(s) 168
Cac8I GCNNGC 1 cut(s) 70
CfoI GCGC 1 cut(s) 369
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 150
Csp6I GTAC 1 cut(s) 42
CviAII CATG 2 cut(s) 145, 400
CviJI RGCY 8 cut(s) 5, 10, 95, 121, 152, 179, 236, 343
CviKI_1 RGCY 8 cut(s) 5, 10, 95, 121, 152, 179, 236, 343
CviQI GTAC 1 cut(s) 42
DdeI CTNAG 1 cut(s) 335
DpnI GATC 4 cut(s) 348, 408, 416, 475
DpnII GATC 4 cut(s) 346, 406, 414, 473
Eam1104I CTCTTC 1 cut(s) 288
EarI CTCTTC 1 cut(s) 288
EciI GGCGGA 1 cut(s) 332
Eco32I GATATC 1 cut(s) 169
Eco88I CYCGRG 1 cut(s) 241
EcoRV GATATC 1 cut(s) 169
FaeI CATG 2 cut(s) 148, 403
FaiI YATR 7 cut(s) 49, 125, 146, 287, 359, 401, 441
FalI AAGNNNNNCTT 2 cut(s) 166, 198
FatI CATG 2 cut(s) 144, 399
FauI CCCGC 1 cut(s) 77
FblI GTMKAC 1 cut(s) 396
Fnu4HI GCNGC 3 cut(s) 180, 365, 484
Fsp4HI GCNGC 3 cut(s) 180, 365, 484
FspBI CTAG 2 cut(s) 258, 487
GlaI GCGC 1 cut(s) 368
GluI GCNGC 3 cut(s) 180, 365, 484
HaeII RGCGCY 1 cut(s) 370
HaeIII GGCC 1 cut(s) 152
HapII CCGG 1 cut(s) 153
HhaI GCGC 1 cut(s) 369
Hin1II CATG 2 cut(s) 148, 403
Hin6I GCGC 1 cut(s) 367
HinP1I GCGC 1 cut(s) 367
HindIII AAGCTT 1 cut(s) 341
HpaII CCGG 1 cut(s) 153
HphI GGTGA 1 cut(s) 167
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 1 cut(s) 173
Hpy188III TCNNGA 2 cut(s) 80, 471
Hpy8I GTNNAC 1 cut(s) 397
HpyAV CCTTC 1 cut(s) 168
HpyCH4III ACNGT 2 cut(s) 277, 394
HpyCH4IV ACGT 1 cut(s) 445
HpyCH4V TGCA 3 cut(s) 51, 58, 115
HpyF10VI GCNNNNNNNGC 3 cut(s) 92, 158, 349
HpyF3I CTNAG 1 cut(s) 335
HpySE526I ACGT 1 cut(s) 445
Hsp92II CATG 2 cut(s) 148, 403
HspAI GCGC 1 cut(s) 367
Kzo9I GATC 4 cut(s) 346, 406, 414, 473
LpnPI CCDG 2 cut(s) 166, 456
Lsp1109I GCAGC 2 cut(s) 166, 470
LweI GCATC 1 cut(s) 73
MaeI CTAG 2 cut(s) 258, 487
MaeII ACGT 1 cut(s) 445
MaeIII GTNAC 1 cut(s) 207
MalI GATC 4 cut(s) 348, 408, 416, 475
MboI GATC 4 cut(s) 346, 406, 414, 473
MboII GAAGA 3 cut(s) 29, 211, 305
MfeI CAATTG 1 cut(s) 59
MflI RGATCY 1 cut(s) 473
MhlI GDGCHC 1 cut(s) 451
MluCI AATT 2 cut(s) 59, 387
MnlI CCTC 4 cut(s) 96, 141, 151, 428
MspI CCGG 1 cut(s) 153
MunI CAATTG 1 cut(s) 59
MwoI GCNNNNNNNGC 3 cut(s) 92, 158, 349
NdeII GATC 4 cut(s) 346, 406, 414, 473
NlaIII CATG 2 cut(s) 148, 403
NmuCI GTSAC 1 cut(s) 207
NspI RCATGY 1 cut(s) 403
PciI ACATGT 1 cut(s) 399
PflFI GACNNNGTC 1 cut(s) 131
PkrI GCNGC 3 cut(s) 181, 366, 485
PscI ACATGT 1 cut(s) 399
PspPI GGNCC 1 cut(s) 150
PsuI RGATCY 1 cut(s) 473
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 1 cut(s) 43
RsaNI GTAC 1 cut(s) 42
SatI GCNGC 3 cut(s) 180, 365, 484
Sau3AI GATC 4 cut(s) 346, 406, 414, 473
Sau96I GGNCC 1 cut(s) 150
SduI GDGCHC 1 cut(s) 451
SetI ASST 5 cut(s) 114, 123, 238, 345, 448
SfaNI GCATC 1 cut(s) 73
Sse9I AATT 2 cut(s) 59, 387
SsiI CCGC 4 cut(s) 70, 317, 350, 364
SspMI CTAG 2 cut(s) 258, 487
TaaI ACNGT 2 cut(s) 277, 394
TaiI ACGT 1 cut(s) 448
TaqI TCGA 1 cut(s) 409
TasI AATT 2 cut(s) 59, 387
TauI GCSGC 1 cut(s) 367
TscAI CASTG 1 cut(s) 168
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 2 cut(s) 179, 483
Tsp45I GTSAC 1 cut(s) 207
TspDTI ATGAA 1 cut(s) 153
TspGWI ACGGA 1 cut(s) 115
TspRI CASTG 1 cut(s) 168
Tth111I GACNNNGTC 1 cut(s) 131
XceI RCATGY 1 cut(s) 403
XmiI GTMKAC 1 cut(s) 396
XspI CTAG 2 cut(s) 258, 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.